FC912167

Overview
NameFC912167
Unique NameFC912167
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length899
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC912167 vs. ExPASy Swiss-Prot
Match: CDC16_HUMAN (Cell division cycle protein 16 homolog OS=Homo sapiens GN=CDC16 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.502e-11
Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = 1 
Query:  511 IEKLRGVVRDCVSKHLYSSAIFFADKVAALT-NDPADVYMQAQALFLGRHYRRAFHLLNASKIVLRDLRFRYLAAKCLEELKEWEQCLSMLGDAKADEDGNVYD---TKDSNVMYLDKDGEDREINISSAIC 894
            +E+LR  VR  + +  Y SA+F+ADKVA+L+  +P D+Y  AQ L+L   Y RA H L + K+       RYLAA+C    KE +Q L +L D +   +  +++     +S       D E  + +I S+IC
Sbjct:    3 LERLRKRVRQYLDQQQYQSALFWADKVASLSREEPQDIYWLAQCLYLTAQYHRAAHALRSRKLDKLYEACRYLAARCHYAAKEHQQALDVL-DMEEPINKRLFEKYLKDESGFKDPSSDWEMSQSSIKSSIC 133
[Close]
BLAST of FC912167 vs. ExPASy Swiss-Prot
Match: CDC16_MOUSE (Cell division cycle protein 16 homolog OS=Mus musculus GN=Cdc16 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.962e-11
Identity = 48/132 (36.36%), Postives = 72/132 (54.55%), Query Frame = 1 
Query:  511 IEKLRGVVRDCVSKHLYSSAIFFADKVAALTN-DPADVYMQAQALFLGRHYRRAFHLLNASKIVLRDLRFRYLAAKCLEELKEWEQCLSMLGDAKADEDGNVYD---TKDSNVMYLDKDGEDREINISSAIC 894
            +E LR  VR  + +  Y SA+F+ADKVA+L++ +P DVY  AQ L+L   Y RA H L + K+       RYLAA+C    KE +Q L +L D +   +  +++     D+       D E  + +I S+IC
Sbjct:    3 LEPLRKRVRQYLDQQQYQSALFWADKVASLSHEEPQDVYWLAQCLYLTAQYHRAAHALRSRKLDKLYEACRYLAARCHYAAKEHQQALDIL-DMEEPINRRLFEKYLKDDNGSRDPSSDWEMSQSSIKSSIC 133
The following BLAST results are available for this feature:
BLAST of FC912167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CDC16_HUMAN1.502e-1135.61Cell division cycle protein 16 homolog OS=Homo sap... [more]
CDC16_MOUSE1.962e-1136.36Cell division cycle protein 16 homolog OS=Mus musc... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA31CH09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA31CH09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC912167 ID=FC912167; Name=FC912167; organism=Citrus clementina; type=EST; length=899bp
ATCGAAATTGCCGAATTGCCCAAATACCCAAATTGAAATCACCGAGAAGA
GATGATGACGAGTTGCCGACGGTGGGTGGTGGCGATTTGTTCTCGGTTGC
TGAGTCGCTAGCCTTGGCACGCAGCTTTGCCCGGTTGCAAGCTTGGGAAA
CGTAAACATTATTTTTGCAAGCTTGGGAAACGGTGATGTCTTCTACACAT
AAAAATTATTTTTGCAAGCTTGTGAAACAGTGATGTATTCATTATTAAAC
TTTTGTTCTTGTTTTAGGATGGGATGATTATTTTTGGGGGGTTAGCTTTC
CAGTGAACGTCAGATGATTTTTTAGTGGTTTGATGCAACCTGGAAACAGT
AGTTGTAAGTAGTCGTAGTCGTTTCCTTCACTGTGCAAAACCCCCCATCT
CAAACAAAACCCTCATTTTTCCCTCTTAACAAAGAAACAAGACTAAAAGC
CACTTTCCCGAGAACCAAACATACCCTTAGATCTCCAATTTCATAATGAG
AGAAGAAGAAATAGAGAAGCTTCGAGGAGTGGTTCGCGACTGTGTGAGCA
AGCATTTGTACTCGTCGGCCATATTTTTCGCCGATAAAGTCGCCGCTTTA
ACCAATGACCCTGCTGACGTGTACATGCAGGCTCAGGCTCTGTTCCTTGG
TCGCCACTACCGCCGTGCATTTCACCTCCTTAACGCCTCGAAAATTGTGC
TCCGTGACCTCCGCTTTCGTTACTTGGCTGCTAAGTGTCTGGAGGAACTG
AAGGAGTGGGAACAGTGTTTGTCGATGCTCGGTGATGCTAAGGCTGATGA
AGATGGGAATGTTTATGACACAAAGGATAGCAATGTCATGTACTTAGATA
AAGATGGGGAAGACAGAGAAATCAATATCTCTTCAGCTATATGCTTTTT
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