FC914245

Overview
NameFC914245
Unique NameFC914245
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length940
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC914245 vs. ExPASy Swiss-Prot
Match: IQD1_ARATH (Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 7.303e-57
Identity = 137/293 (46.76%), Postives = 165/293 (56.31%), Query Frame = 3
Query:   72 MGKKGKWFASVKNAFSPESXXXXXXXXXXXXXXXXXEGSNSAPLETVKTTXXXXXXXXXXEEVEITVAENELSNHVANEEVITAVPAMAAVSADQSVTEV---RIVTNTRFAGKSKEEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVKRQAANTLRCMXXXXXXXXXXXXXXXXMSEENQALQRQLLQKHAKELA-MQMGEEWDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRNPTWGWSWLERWMAARPWESRSATEKNLT 938
            M KK KW  +VK AFSP+S                 +   S P+    +           +EV     E + + +  + + +TA  A   V +  S  E     IV N RFAGKSKEEAAAI IQ+ FRG+                  MEG VV+RQAA TL+CM                MSEENQA  +QLLQKHAKEL  ++ G  W+ S QSKEQVEA +L KYEATMRRERA+AY+FTHQQ  K+ SK++NPMFMDP NPTWGWSWLERWMA RPWES S  E+N T
Sbjct:    1 MVKKAKWLKNVKKAFSPDSKKLKHESVECQ------DSVISYPVLIATSRSSSPQFEVRVDEVNY---EQKKNLYPPSSDSVTATVAHVLVDSPPSSPESVHQAIVVN-RFAGKSKEEAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQIRSRRIRMSEENQARHKQLLQKHAKELGGLKNGGNWNYSNQSKEQVEAGMLHKYEATMRRERALAYAFTHQQNLKSFSKTANPMFMDPSNPTWGWSWLERWMAGRPWES-SEKEQNTT 282          
BLAST of FC914245 vs. ExPASy Swiss-Prot
Match: IQD14_ARATH (Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.459e-12
Identity = 51/160 (31.87%), Postives = 80/160 (50.00%), Query Frame = 3
Query:  411 EEAAAIRIQTAFRGYXXXXXXXXXXXXXXXXXXMEGPVVKRQAANTLRCMXXXXXXXXXXXXXXXXMSEENQALQRQLLQKHAKELAMQMGEE-WDDSIQSKEQVEANLLSKYEATMRRERAMAYSFTHQQTWKNSSKSSNPMFMDPRN-PTWGWSWLER 884
            + A+A +IQ AFRGY                  + G  VKRQ  N ++ M                M E     Q Q+ +  AK  A + G + WDDS+ +KE+ ++    K +A ++RER+MAY+++ ++ WKNS KS+     D R+ P W W+W++R
Sbjct:  321 QHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQIQSRRIKMLEN----QAQVEKDEAKWAASEAGNDNWDDSVLTKEERDSRSQRKTDAIIKRERSMAYAYS-RKLWKNSPKST----QDNRSFPQW-WNWVDR 470          
The following BLAST results are available for this feature:
BLAST of FC914245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
IQD1_ARATH7.303e-5746.76Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD... [more]
IQD14_ARATH2.459e-1231.88Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQ... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA85BF04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA85BF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC914245 ID=FC914245; Name=FC914245; organism=Citrus clementina; type=EST; length=940bp
CTTGTTTGAGATCTGGCGGTTACCACTTTTGTTCTTTTCCACTGGGTTAG
TAATTGAGGAATGATAAGGTGATGGGGAAAAAAGGAAAGTGGTTTGCTAG
TGTAAAGAATGCTTTCAGCCCAGAATCCAAGGAGAAGAAAGACAAGAAAT
CGAAGAAGAAATGGTTTGGGAAGCAAAAAGAAGGTTCCAATTCTGCTCCT
TTAGAAACTGTCAAAACAACGCTGCCTCCTCCTGCTCCTCCTCTTCAGCC
AGAGGAGGTAGAAATAACTGTAGCGGAGAATGAGCTGAGCAACCATGTAG
CAAATGAGGAAGTTATTACTGCAGTGCCTGCAATGGCTGCTGTTTCTGCT
GATCAGTCTGTAACTGAGGTTCGAATTGTGACAAATACTCGCTTTGCTGG
AAAGTCAAAAGAGGAAGCAGCAGCAATTAGGATTCAAACAGCTTTCCGTG
GTTACTTGGCAAGAAGGGCATTGAGAGCTTTGAGAGGTCTTGTCAGGCTA
AAATTGCTTATGGAAGGACCAGTGGTGAAAAGACAAGCTGCTAACACCCT
TAGATGCATGCAAACACTCTCCCGTCTGCAGTCCCAAATTCGTTCTAGGA
GGGTCAGGATGTCAGAAGAGAATCAAGCTCTCCAGAGACAACTCCTGCAA
AAACATGCTAAAGAGCTTGCAATGCAGATGGGGGAGGAATGGGATGACAG
CATACAGTCAAAGGAGCAAGTTGAAGCGAATCTGCTAAGCAAATATGAAG
CAACTATGAGAAGAGAAAGGGCAATGGCTTACTCATTTACGCATCAGCAA
ACCTGGAAGAATTCTTCGAAGTCTTCAAACCCAATGTTCATGGATCCGAG
GAATCCCACGTGGGGTTGGAGCTGGCTGGAACGTTGGATGGCAGCCCGGC
CATGGGAGAGCCGTAGCGCGACTGAGAAGAACCTAACAAT
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