FC917037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC917037 vs. ExPASy Swiss-Prot
Match: DDPS2_ARATH (Dehydrodolichyl diphosphate synthase 2 OS=Arabidopsis thaliana GN=At5g58770 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 6.491e-24 Identity = 50/106 (47.17%), Postives = 79/106 (74.53%), Query Frame = 2 Query: 491 VRMLIIFLINF-YWLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVI 805 +++L +F + W++ ++E++FL LFE+S+K+E + +RIS+IGDSS+LP++L ++ + E+ TKNN+ QLIVAV YSGKYDV+QAC+ IA++VKD I Sbjct: 122 IQVLTVFAFSTDNWIRPRIEIDFLFSLFERSLKTEFQNLAKNNVRISIIGDSSKLPKSLLRVINEVEEVTKNNTRLQLIVAVGYSGKYDVLQACRGIARRVKDGEI 227
BLAST of FC917037 vs. ExPASy Swiss-Prot
Match: DDPS5_ARATH (Dehydrodolichyl diphosphate synthase 5 OS=Arabidopsis thaliana GN=At5g58784 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.641e-17 Identity = 42/94 (44.68%), Postives = 67/94 (71.28%), Query Frame = 2 Query: 527 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIR 808 W + + EV+ LM LFEK + S++ S+ I+IS+IG+ ++LP +L L+ + E+ TK+ LI+A+ YSG+YD++QACKS+A KVKD +I+ Sbjct: 128 WERPEDEVKCLMALFEKYLASDMPYLRSDKIKISVIGNRTKLPESLLGLIEEVEEATKSYEGKNLIIAIDYSGRYDILQACKSLANKVKDGLIQ 221
BLAST of FC917037 vs. ExPASy Swiss-Prot
Match: UPPS1_ANASP (Undecaprenyl pyrophosphate synthetase 1 OS=Anabaena sp. (strain PCC 7120) GN=uppS1 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.110e-15 Identity = 36/94 (38.30%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 527 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIR 808 W + Q EVEFLM LF++ ++ EL + E ++I +G+ + LPR+LQ + + + TKNN + VA +Y G+ +++QAC++IAQKV+ +++ Sbjct: 78 WKRPQEEVEFLMTLFQRVLRQELREMVEENVQIQFVGNLTALPRSLQAEISRSMEETKNNRGIRFSVATNYGGRQEILQACRAIAQKVQQGLLQ 171
BLAST of FC917037 vs. ExPASy Swiss-Prot
Match: UPPS_ANAVT (Undecaprenyl pyrophosphate synthetase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=uppS PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.449e-15 Identity = 36/94 (38.30%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 527 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIR 808 W + Q EVEFLM LF++ ++ EL + E ++I +G+ + LPR+LQ + + + TKNN + VA +Y G+ +++QAC++IAQKV+ +++ Sbjct: 78 WKRPQEEVEFLMTLFQRVLRQELREMVEENVQIQFVGNLAALPRSLQAEISRSMEATKNNRGIRFSVATNYGGRQEILQACRAIAQKVQQGLLQ 171
BLAST of FC917037 vs. ExPASy Swiss-Prot
Match: DDPS4_ARATH (Dehydrodolichyl diphosphate synthase 4 OS=Arabidopsis thaliana GN=At5g58782 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.602e-14 Identity = 36/94 (38.30%), Postives = 67/94 (71.28%), Query Frame = 2 Query: 527 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIR 808 W + ++EV+ LM LF++ +KS+++ F S+ IR+S+IG+ +++P +L V + E+ TK+ LI+A+ YSG++D++ ACK+I +K + +IR Sbjct: 115 WGRHKIEVKCLMYLFQRYLKSKIQFFQSKEIRVSVIGNLAKIPESLLRTVHELEEATKSYKKKHLILAIDYSGRFDILGACKNIVKKSEQGLIR 208
BLAST of FC917037 vs. ExPASy Swiss-Prot
Match: UPPS_THEEB (Undecaprenyl pyrophosphate synthetase OS=Thermosynechococcus elongatus (strain BP-1) GN=uppS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.089e-14 Identity = 36/89 (40.45%), Postives = 58/89 (65.17%), Query Frame = 2 Query: 527 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVK 793 W + EVEFLM LFE+ ++ EL ++EG++I +GD + LP++LQ + A T NN + +VA +Y G+ +++ AC+SIA +VK Sbjct: 80 WGRPLPEVEFLMTLFEQVLRRELGEMVAEGVQIHFVGDLTCLPKSLQAEIERAVAATANNQKIKFVVATNYGGRREIIHACRSIAAQVK 168
BLAST of FC917037 vs. ExPASy Swiss-Prot
Match: UPPS_PROMP (Undecaprenyl pyrophosphate synthetase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=uppS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.953e-14 Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 527 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIR 808 W++ EV+FL+ LFEK +K E+ E I+I IGD S LP +L+ L++ +E T NN F L + V+Y G+ ++V+A K IA K I+ Sbjct: 81 WIRPSNEVDFLINLFEKVLKKEISEIHQESIKIKFIGDLSPLPNSLKLLIKSSEALTNNNKKFTLNICVNYGGRQEIVKAAKEIAIKSSSGKIK 174
BLAST of FC917037 vs. ExPASy Swiss-Prot
Match: UPPS_SYNY3 (Undecaprenyl pyrophosphate synthetase OS=Synechocystis sp. (strain PCC 6803) GN=uppS PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.357e-13 Identity = 34/89 (38.20%), Postives = 61/89 (68.54%), Query Frame = 2 Query: 527 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVK 793 W + EVEFLM LFE+ ++ EL+ ++E +RI +G+ + LPR+LQ+ + + + TKNN+ + VA +Y G+ ++V C++IA++V+ Sbjct: 78 WGRPLEEVEFLMTLFERVLRRELKEMMAENVRIRFVGNLTSLPRSLQDEIARSMEDTKNNTGIRFTVATNYGGRQEIVHVCQAIAREVQ 166
BLAST of FC917037 vs. ExPASy Swiss-Prot
Match: UPPS_GLOVI (Undecaprenyl pyrophosphate synthetase OS=Gloeobacter violaceus GN=uppS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.772e-13 Identity = 35/89 (39.33%), Postives = 54/89 (60.67%), Query Frame = 2 Query: 527 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVK 793 W + Q EVEFLM LFEK + EL + EG+RI +G + LP LQ + A T+ N+ + VA +Y G+ ++V AC+ +A++V+ Sbjct: 78 WKRPQYEVEFLMALFEKVLNHELSEMVDEGVRIRFVGALAHLPGALQSAIEGAMAATEANTAVEFTVATNYGGRQEIVNACRELAEQVR 166
BLAST of FC917037 vs. ExPASy Swiss-Prot
Match: DDPS3_ARATH (Dehydrodolichyl diphosphate synthase 3 OS=Arabidopsis thaliana GN=At5g58780 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.733e-13 Identity = 34/94 (36.17%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 527 WLKVQVEVEFLMKLFEKSIKSELEGFISEGIRISMIGDSSRLPRTLQELVRDAEDRTKNNSNFQLIVAVSYSGKYDVVQACKSIAQKVKDDVIR 808 W + ++EV+ LM L + +KS+++ F E R+S+IG+ +++P +L V++ E+ T++ LI+A+ YSG+ D+++ACKSI +K + +IR Sbjct: 128 WGRHKIEVKCLMSLIQHYLKSKIQYFQREETRVSVIGNLTKIPESLLRTVQEIEEATRSYKKKHLILAIDYSGRLDILRACKSIVKKSEKGLIR 221 The following BLAST results are available for this feature:
BLAST of FC917037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >FC917037 ID=FC917037; Name=FC917037; organism=Citrus clementina; type=EST; length=809bpback to top |