FC917766

Overview
NameFC917766
Unique NameFC917766
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length378
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917766 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 2.956e-47
Identity = 95/101 (94.06%), Postives = 100/101 (99.01%), Query Frame = 3
Query:   75 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIAKS 377
            MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHI+PDK +N+LSIIDSGIGMTK+DLVNNLGTIA+S
Sbjct:    1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARS 101          
BLAST of FC917766 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 2.956e-47
Identity = 95/101 (94.06%), Postives = 100/101 (99.01%), Query Frame = 3
Query:   75 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIAKS 377
            MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHI+PDK +N+LSIIDSGIGMTK+DLVNNLGTIA+S
Sbjct:    1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARS 101          
BLAST of FC917766 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 3.860e-47
Identity = 94/101 (93.07%), Postives = 100/101 (99.01%), Query Frame = 3
Query:   75 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIAKS 377
            MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHI+PDK +N+LSIIDSG+GMTK+DLVNNLGTIA+S
Sbjct:    1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARS 101          
BLAST of FC917766 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 3.860e-47
Identity = 94/101 (93.07%), Postives = 100/101 (99.01%), Query Frame = 3
Query:   75 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIAKS 377
            MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHI+PDK +N+LSIIDSG+GMTK+DLVNNLGTIA+S
Sbjct:    1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARS 101          
BLAST of FC917766 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 9.508e-46
Identity = 92/99 (92.93%), Postives = 97/99 (97.98%), Query Frame = 3
Query:   81 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIAKS 377
            ++ ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD QPELFIHIIPDKTNN+L+IIDSGIGMTKADLVNNLGTIA+S
Sbjct:    2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARS 100          
BLAST of FC917766 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.508e-46
Identity = 92/99 (92.93%), Postives = 97/99 (97.98%), Query Frame = 3
Query:   81 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIAKS 377
            ++ ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD QPELFIHIIPDKTNN+L+IIDSGIGMTKADLVNNLGTIA+S
Sbjct:    2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARS 100          
BLAST of FC917766 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.622e-45
Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = 3
Query:   81 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIAKS 377
            S+ ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD QPELFIHIIPDK NN+L+IIDSGIGMTKADLVNNLGTIA+S
Sbjct:    2 SDVETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARS 100          
BLAST of FC917766 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 6.814e-44
Identity = 88/99 (88.89%), Postives = 95/99 (95.96%), Query Frame = 3
Query:   81 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIAKS 377
            +E ETFAFQAEINQLLSLIINTFYSNKEIFLRELISN+SDALDKIRFESLTDKSKLDAQPELFI ++PDKTN +LSIIDSG+GM KADLVNNLGTIA+S
Sbjct:    7 AEAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDAQPELFIRLVPDKTNKTLSIIDSGVGMAKADLVNNLGTIARS 105          
BLAST of FC917766 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 1.162e-43
Identity = 88/99 (88.89%), Postives = 95/99 (95.96%), Query Frame = 3
Query:   81 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIAKS 377
            ++ ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD QPELFI ++PDK+N +LSIIDSGIGMTKADLVNNLGTIA+S
Sbjct:    2 ADAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRLVPDKSNKTLSIIDSGIGMTKADLVNNLGTIARS 100          
BLAST of FC917766 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 4.883e-42
Identity = 84/99 (84.85%), Postives = 95/99 (95.96%), Query Frame = 3
Query:   81 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIAKS 377
            +ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISN+SDALDKIRFESLTDKS ++AQPELFI ++PDK + +LSIIDSG+GMTK+DLVNNLGTIA+S
Sbjct:   12 AETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSNVNAQPELFIRLVPDKASKTLSIIDSGVGMTKSDLVNNLGTIARS 110          
The following BLAST results are available for this feature:
BLAST of FC917766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HSP81_ORYSJ2.956e-4794.06Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI2.956e-4794.06Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP83_ORYSJ3.860e-4793.07Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ3.860e-4793.07Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP83_ARATH9.508e-4692.93Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP82_ARATH9.508e-4692.93Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HSP80_SOLLC1.622e-4592.93Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP83_IPONI6.814e-4488.89Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP81_ARATH1.162e-4388.89Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]
HSP82_MAIZE4.883e-4284.85Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA24CB10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA24CB10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917766 ID=FC917766; Name=FC917766; organism=Citrus clementina; type=EST; length=378bp
CTCTCGTTCGCTTCCAAAACCCTTGTTTATAACTCAGAAGAGATCGTTTT
TTGGTTGAACGGCAGGTCGTTTCGATGGCATCAGAGACAGAGACGTTTGC
CTTTCAGGCTGAGATCAACCAGTTGTTGAGTTTGATCATCAACACCTTTT
ACAGTAACAAGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGAT
GCATTGGATAAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGA
TGCCCAACCAGAGCTTTTCATTCACATTATCCCTGATAAGACCAACAACT
CATTGTCTATTATTGACAGTGGTATTGGCATGACTAAAGCTGATTTGGTG
AACAACCTTGGTACAATTGCTAAGTCTG
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