FC917774

Overview
NameFC917774
Unique NameFC917774
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length843
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917774 vs. ExPASy Swiss-Prot
Match: SCPDH_ARATH (Probable mitochondrial saccharopine dehydrogenase At5g39410 OS=Arabidopsis thaliana GN=At5g39410 PE=1 SV=2)

HSP 1 Score: 392.504 bits (1007), Expect = 1.547e-108
Identity = 191/268 (71.27%), Postives = 234/268 (87.31%), Query Frame = 3
Query:   51 SQIPE-LFDVIILGASGFTGKYVVREALKLFNLPSS-PIKNLALAGRNPTKVKQALQWASPSHS--LSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLESDKRIVGNFGTYESAVLGVANAQELQKLRQSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIKLPSADATVVRRSLSILTKNPHG 842
            +Q PE ++D++ILGASGFTGKYVVREALK    PSS P+K+LALAGRNPT++ Q+L+WA+  +    S+ ILTADT+DP SL RLC+QTKL+LNCVGP+R+HGDPV +AC  SGCDYLDISGEPEFMERMEA YH++A ETGSL+VSACGFDSIPAELG++FN++QW+ P+VPNQIEAY+SLESDK+I GNFGTYESAVLGVANA++L++LR+SRPRR RP I GP P +GP +E+QK IGLWA+KLPSADA VVRR+L+ LT+ PHG
Sbjct:    4 TQKPEPVYDMVILGASGFTGKYVVREALKFLQTPSSSPLKSLALAGRNPTRLTQSLEWAARPNPPPSSVAILTADTSDPDSLRRLCTQTKLILNCVGPFRIHGDPVVSACADSGCDYLDISGEPEFMERMEANYHDRAEETGSLIVSACGFDSIPAELGLLFNAKQWVSPSVPNQIEAYLSLESDKKIAGNFGTYESAVLGVANAEKLKELRRSRPRRPRPTICGP-PAKGPTLENQKTIGLWALKLPSADAVVVRRTLTTLTEKPHG 270          
BLAST of FC917774 vs. ExPASy Swiss-Prot
Match: SCPDH_MOUSE (Probable saccharopine dehydrogenase OS=Mus musculus GN=Sccpdh PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.441e-39
Identity = 92/263 (34.98%), Postives = 153/263 (58.17%), Query Frame = 3
Query:   69 FDVIILGASGFTGKYVVREALKLFNLPSSPIKNL--ALAGRNPTKVKQALQWAS-----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLES-DKRIVGNFGTYESAVLGVANAQELQKLRQSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIKLPSADATVVRRSLSILTKN 833
            F +++ GASGFTG++V  E  +   + S     L  A+AGR+  K++Q L+ A+     PS S  + ++  D ++P SL  +  Q KL+LNCVGPYR +G+PV  AC+ +G   +DI GEP+F+E M A+YHEKA E G  ++ + GFDSIPA+LGV++   Q         +E+++++ +  + +  + GT++SA+ G  +   L+KLR     +  P++      R P V   + +  ++I    +D +VV+R+   L +N
Sbjct:    8 FHLVVFGASGFTGQFVTEEVARE-QIASEQSSRLPWAVAGRSKEKLQQVLEKAAQKLGRPSLSSEVGVIICDISNPASLDEMAKQAKLVLNCVGPYRFYGEPVVKACIENGTSCIDICGEPQFLELMHAKYHEKAAEKGVYIIGSSGFDSIPADLGVLYTRNQM--NGTLTAVESFLTINTGPEGLCIHDGTWKSAIYGFGDKGSLRKLRSVSCLKPVPIVGTKLKRRWP-VSYCRELNSYSIPFLGSDISVVKRTQRYLHEN 266          
BLAST of FC917774 vs. ExPASy Swiss-Prot
Match: SCPDH_BOVIN (Probable saccharopine dehydrogenase OS=Bos taurus GN=SCCPDH PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.375e-38
Identity = 91/262 (34.73%), Postives = 150/262 (57.25%), Query Frame = 3
Query:   69 FDVIILGASGFTGKYVVREALKLFNLPSSPIK-NLALAGRNPTKVKQALQWAS-----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLES-DKRIVGNFGTYESAVLGVANAQELQKLRQSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIKLPSADATVVRRSLSILTKN 833
            F +++ GASGFTG++V  E  +    P        A+AGR+  K+ + L+ A+     P+ S  + I+  D T+P SL  +  Q  ++LNCVGPYR +G+PV  AC+ +G   +DISGEP+F+E M  +YHEKA E G  ++ + GFDSIPA+LGV++   +         +E+++++ S  + +  + GT++SAV G  +   L+KLR     +  P++ GP   R   +   + +  ++I    AD +VV+R+   L +N
Sbjct:    8 FHLVVFGASGFTGQFVTEEVAREQVSPERTSHLPWAVAGRSREKLLRVLERAAMKLGRPTLSSEVGIIICDITNPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGTSCIDISGEPQFLELMYWKYHEKAAEKGVYIIGSSGFDSIPADLGVIYTRNKM--NGTLTAVESFLTISSGPEGLCVHDGTWKSAVYGFGDKSNLKKLRNESDMKPVPIV-GPKLKRRWPISYCRELNSYSIPFLGADVSVVKRTQRYLHEN 266          
BLAST of FC917774 vs. ExPASy Swiss-Prot
Match: SCPDH_RAT (Probable saccharopine dehydrogenase OS=Rattus norvegicus GN=Sccpdh PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.094e-37
Identity = 92/263 (34.98%), Postives = 150/263 (57.03%), Query Frame = 3
Query:   69 FDVIILGASGFTGKYVVREALKLFNLPSSPIKNL--ALAGRNPTKVKQALQWASP-----SHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLES-DKRIVGNFGTYESAVLGVANAQELQKLRQSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIKLPSADATVVRRSLSILTKN 833
            F +++ GASGFTG++V  E  +   + S     L  A+AGR+  K++Q L+ A+      + S  + I+  D ++P SL  +  +  L+LNCVGPYR +G+PV  AC+ +G   +DI GEP+F+E M  +YHEKA E G  ++ + GFDSIPA+LGV++   Q         +E+++++ S  + +  + GT++SA+ G  +   L+KLR     +  PVI      R P V   + +  +AI    +D +VV+R+   L +N
Sbjct:    8 FQLVVFGASGFTGQFVTEEVARE-QMASEQSSRLPWAVAGRSKEKLQQVLEKAAQKLGRATLSSEVGIIICDISNPASLDEMAKKATLVLNCVGPYRFYGEPVVKACIENGTSCIDICGEPQFLELMHVKYHEKAAEKGVYIIGSSGFDSIPADLGVLYTRNQM--NGTLTAVESFLTINSGPEGLCIHDGTWKSAIYGFGDKGSLRKLRSVSNLKPVPVIGSKLKRRWP-VSYCRELNSYAIPFLGSDMSVVKRTQRYLHEN 266          
BLAST of FC917774 vs. ExPASy Swiss-Prot
Match: SCPDH_HUMAN (Probable saccharopine dehydrogenase OS=Homo sapiens GN=SCCPDH PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.437e-37
Identity = 90/262 (34.35%), Postives = 152/262 (58.02%), Query Frame = 3
Query:   69 FDVIILGASGFTGKYVVRE-ALKLFNLPSSPIKNLALAGRNPTKVKQALQWAS-----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLESDKRIVG-NFGTYESAVLGVANAQELQKLRQSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIKLPSADATVVRRSLSILTKN 833
            F +++ GASGFTG++V  E A +  +   S     A+AGR+  K+++ L+ A+     P+ S  + I+  D  +P SL  +  Q  ++LNCVGPYR +G+PV  AC+ +G   +DISGEP+F+E M+ +YHEKA + G  ++ + GFDSIPA+LGV++   +         +E+++++ S    +  + GT++SA+ G  +   L+KLR     +  P+I      R P+   ++  G ++I    +D +VVRR+   L +N
Sbjct:    8 FHLVVFGASGFTGQFVTEEVAREQVDPERSSRLPWAVAGRSREKLQRVLEKAALKLGRPTLSSEVGIIICDIANPASLDEMAKQATVVLNCVGPYRFYGEPVIKACIENGASCIDISGEPQFLELMQLKYHEKAADKGVYIIGSSGFDSIPADLGVIYTRNKM--NGTLTAVESFLTIHSGPEGLSIHDGTWKSAIYGFGDQSNLRKLRNVSNLKPVPLIGPKLKRRWPISYCRELKG-YSIPFMGSDVSVVRRTQRYLYEN 266          
BLAST of FC917774 vs. ExPASy Swiss-Prot
Match: SCPDH_PONAB (Probable saccharopine dehydrogenase OS=Pongo abelii GN=SCCPDH PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 9.260e-37
Identity = 88/262 (33.59%), Postives = 152/262 (58.02%), Query Frame = 3
Query:   69 FDVIILGASGFTGKYVVRE-ALKLFNLPSSPIKNLALAGRNPTKVKQALQWAS-----PSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLESDKRIVG-NFGTYESAVLGVANAQELQKLRQSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIKLPSADATVVRRSLSILTKN 833
            F +++ GASGFTG++V  E A +  +   S     A+AGR+  K+++ L+ A+     P+ S  + I+  D  +P SL  +  Q  ++ NCVGPYR +G+PV  AC+ +G   +DISGEP+F+E M+ +YHEKA + G  ++ + GFDSIPA+LGV++   +         +E+++++ S    +  + GT++SA+ G  +   L+KLR +   +  P++      R P+   ++  G ++I    +D +VVRR+   L +N
Sbjct:    8 FHLVVFGASGFTGQFVTEEVAREQVDPERSSRLPWAVAGRSREKLQRVLEKAALKLGRPTLSSEVGIIICDIANPASLDEMAKQATVVPNCVGPYRFYGEPVIKACIENGASCIDISGEPQFLELMQLKYHEKAADKGVYIIGSSGFDSIPADLGVIYTRNKM--NGTLTAVESFLTIHSGPEGLSIHDGTWKSAIYGFGDQSNLRKLRNASNLKPVPLVGPKLKRRWPISYCRELKG-YSIPFMGSDVSVVRRTQRYLYEN 266          
BLAST of FC917774 vs. ExPASy Swiss-Prot
Match: TAER_MYCTU (Trans-acting enoyl reductase OS=Mycobacterium tuberculosis GN=Rv2953 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.827e-23
Identity = 63/204 (30.88%), Postives = 109/204 (53.43%), Query Frame = 3
Query:   69 FDVIILGASGFTGKYVVREALKLFNLPSSPIKNLALAGRNPTKVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLES-DKRIV--GNFGTYESAVLGVANAQELQKL 671
            FD+++ GA+GF+GK             S     +ALAGR+  +++       P+ +   P++ AD + P +L  + ++ +++L  VGPY  +G P+ AAC  +G DY D++GE  F       YH++A +TG+ ++ ACGFDSIP++L V    R+ +        +  + L S  +R V  G+  TY  A+   ++  E ++L
Sbjct:    8 FDIVLYGATGFSGKLTAEHLAH-----SGSTARIALAGRSSERLRGVRMMLGPN-AADWPLILADASQPLTLEAMAARAQVVLTTVGPYTRYGLPLVAACAKAGTDYADLTGELMFCRNSIDLYHKQAADTGARIILACGFDSIPSDLNVYQLYRRSVEDGTGELCDTDLVLRSFSQRWVSGGSVATYSEAMRTASSDPEARRL 205          
BLAST of FC917774 vs. ExPASy Swiss-Prot
Match: TAER_MYCTA (Trans-acting enoyl reductase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_2980 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.827e-23
Identity = 63/204 (30.88%), Postives = 109/204 (53.43%), Query Frame = 3
Query:   69 FDVIILGASGFTGKYVVREALKLFNLPSSPIKNLALAGRNPTKVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLES-DKRIV--GNFGTYESAVLGVANAQELQKL 671
            FD+++ GA+GF+GK             S     +ALAGR+  +++       P+ +   P++ AD + P +L  + ++ +++L  VGPY  +G P+ AAC  +G DY D++GE  F       YH++A +TG+ ++ ACGFDSIP++L V    R+ +        +  + L S  +R V  G+  TY  A+   ++  E ++L
Sbjct:    8 FDIVLYGATGFSGKLTAEHLAH-----SGSTARIALAGRSSERLRGVRMMLGPN-AADWPLILADASQPLTLEAMAARAQVVLTTVGPYTRYGLPLVAACAKAGTDYADLTGELMFCRNSIDLYHKQAADTGARIILACGFDSIPSDLNVYQLYRRSVEDGTGELCDTDLVLRSFSQRWVSGGSVATYSEAMRTASSDPEARRL 205          
BLAST of FC917774 vs. ExPASy Swiss-Prot
Match: TAER_MYCBP (Trans-acting enoyl reductase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=BCG_2974 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.827e-23
Identity = 63/204 (30.88%), Postives = 109/204 (53.43%), Query Frame = 3
Query:   69 FDVIILGASGFTGKYVVREALKLFNLPSSPIKNLALAGRNPTKVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLES-DKRIV--GNFGTYESAVLGVANAQELQKL 671
            FD+++ GA+GF+GK             S     +ALAGR+  +++       P+ +   P++ AD + P +L  + ++ +++L  VGPY  +G P+ AAC  +G DY D++GE  F       YH++A +TG+ ++ ACGFDSIP++L V    R+ +        +  + L S  +R V  G+  TY  A+   ++  E ++L
Sbjct:    8 FDIVLYGATGFSGKLTAEHLAH-----SGSTARIALAGRSSERLRGVRMMLGPN-AADWPLILADASQPLTLEAMAARAQVVLTTVGPYTRYGLPLVAACAKAGTDYADLTGELMFCRNSIDLYHKQAADTGARIILACGFDSIPSDLNVYQLYRRSVEDGTGELCDTDLVLRSFSQRWVSGGSVATYSEAMRTASSDPEARRL 205          
BLAST of FC917774 vs. ExPASy Swiss-Prot
Match: TAER_MYCBO (Trans-acting enoyl reductase OS=Mycobacterium bovis GN=Mb2977 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.827e-23
Identity = 63/204 (30.88%), Postives = 109/204 (53.43%), Query Frame = 3
Query:   69 FDVIILGASGFTGKYVVREALKLFNLPSSPIKNLALAGRNPTKVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLES-DKRIV--GNFGTYESAVLGVANAQELQKL 671
            FD+++ GA+GF+GK             S     +ALAGR+  +++       P+ +   P++ AD + P +L  + ++ +++L  VGPY  +G P+ AAC  +G DY D++GE  F       YH++A +TG+ ++ ACGFDSIP++L V    R+ +        +  + L S  +R V  G+  TY  A+   ++  E ++L
Sbjct:    8 FDIVLYGATGFSGKLTAEHLAH-----SGSTARIALAGRSSERLRGVRMMLGPN-AADWPLILADASQPLTLEAMAARAQVVLTTVGPYTRYGLPLVAACAKAGTDYADLTGELMFCRNSIDLYHKQAADTGARIILACGFDSIPSDLNVYQLYRRSVEDGTGELCDTDLVLRSFSQRWVSGGSVATYSEAMRTASSDPEARRL 205          
The following BLAST results are available for this feature:
BLAST of FC917774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
SCPDH_ARATH1.547e-10871.27Probable mitochondrial saccharopine dehydrogenase ... [more]
SCPDH_MOUSE4.441e-3934.98Probable saccharopine dehydrogenase OS=Mus musculu... [more]
SCPDH_BOVIN8.375e-3834.73Probable saccharopine dehydrogenase OS=Bos taurus ... [more]
SCPDH_RAT1.094e-3734.98Probable saccharopine dehydrogenase OS=Rattus norv... [more]
SCPDH_HUMAN2.437e-3734.35Probable saccharopine dehydrogenase OS=Homo sapien... [more]
SCPDH_PONAB9.260e-3733.59Probable saccharopine dehydrogenase OS=Pongo abeli... [more]
TAER_MYCTU5.827e-2330.88Trans-acting enoyl reductase OS=Mycobacterium tube... [more]
TAER_MYCTA5.827e-2330.88Trans-acting enoyl reductase OS=Mycobacterium tube... [more]
TAER_MYCBP5.827e-2330.88Trans-acting enoyl reductase OS=Mycobacterium bovi... [more]
TAER_MYCBO5.827e-2330.88Trans-acting enoyl reductase OS=Mycobacterium bovi... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA31DH03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA31DH03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917774 ID=FC917774; Name=FC917774; organism=Citrus clementina; type=EST; length=843bp
CCATCCAAGAAAAAAAAGAAGAATCAAGAAAGAACACAATGCAAGCGCAG
AGCCAGATTCCGGAATTATTTGATGTAATAATATTGGGAGCTTCAGGCTT
CACAGGCAAGTATGTGGTGAGAGAAGCCTTAAAGTTGTTCAATCTTCCTT
CTTCTCCTATCAAAAACCTAGCTTTGGCAGGCCGCAACCCCACCAAGGTT
AAGCAAGCCCTCCAATGGGCCTCCCCTTCCCATTCCCTTTCAATTCCGAT
CCTCACCGCTGACACCACCGACCCACCTTCCCTCCACCGCCTCTGCTCCC
AAACCAAGCTGCTTCTCAACTGCGTTGGCCCCTATCGCCTCCATGGAGAT
CCCGTTGCCGCCGCCTGCGTGCACTCCGGGTGTGACTACTTGGATATAAG
TGGGGAGCCAGAGTTCATGGAGAGAATGGAGGCCAGGTACCACGAGAAGG
CTGTGGAAACAGGTTCTTTGCTGGTTTCTGCATGTGGATTTGATTCCATT
CCTGCTGAATTGGGGGTAATGTTCAATTCCAGGCAGTGGATACCCCCGGC
GGTGCCAAACCAAATTGAGGCTTACGTTAGCCTAGAGTCTGATAAAAGAA
TTGTGGGAAATTTTGGTACATATGAGTCTGCTGTTTTGGGTGTGGCCAAT
GCTCAAGAGTTGCAAAAGCTGAGGCAATCAAGACCCAGGAGAGCAAGGCC
AGTGATTCCTGGTCCAGCTCCTCTAAGAGGGCCATTGGTAGAAAGCCAGA
AGAGGATTGGCCTTTGGGCTATAAAGTTACCTTCGGCAGATGCTACTGTT
GTCCGAAGATCTCTTTCAATTTTAACAAAAAACCCTCATGGTC
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