FC917780

Overview
NameFC917780
Unique NameFC917780
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length777
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917780 vs. ExPASy Swiss-Prot
Match: AROF_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2)

HSP 1 Score: 286.96 bits (733), Expect = 8.015e-77
Identity = 141/207 (68.12%), Postives = 165/207 (79.71%), Query Frame = 3
Query:  156 QPNFSLHPANTTKPRSLVQPITAVHAAQPAKNSAAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSA 776
            Q +F+ HPA  TKP+S V  +TAVHAA+PA+N+ +VKES +S +  + KW  E WK KKALQLP+YP+  +LE+VLKT+E FPP+VFAG             +G AFLLQGGDCAESFKEFNA NIRDTFRVLLQM +VL FGGQ+P+IKVGRMAGQFAKPRSD FE K+GVKLPSYKGDNINGD FDEKSR+PDP R+IRAY QSA
Sbjct:   27 QSSFTFHPAVNTKPKS-VNLVTAVHAAEPARNAVSVKESVASSSSGALKWTPESWKLKKALQLPDYPNANELESVLKTIEAFPPIVFAGEARNLEERLADAAVGKAFLLQGGDCAESFKEFNATNIRDTFRVLLQMSIVLTFGGQVPVIKVGRMAGQFAKPRSDAFEEKDGVKLPSYKGDNINGDTFDEKSRIPDPNRMIRAYTQSA 232          
BLAST of FC917780 vs. ExPASy Swiss-Prot
Match: AROF_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 4.398e-75
Identity = 147/216 (68.06%), Postives = 163/216 (75.46%), Query Frame = 3
Query:  129 THTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNSAAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSA 776
            +H L +   QP FSL P      R    PI+AVHAA+P+K   AVK+         GKW+L+ WKTKKALQLPEYPD+ +LE+VLKTLE  PPLVFAG             +G AFLLQGGDCAESFKEFNANNIRDTFR+LLQM VVLMFGGQ+P+IKVGRMAGQFAKPRSDPFE  NGVKLPSYKGDNINGD FDEKSR+PDP RLIRAY QSA
Sbjct:   18 SHLLHNPTPQPRFSLFPTTQHGRR---HPISAVHAAEPSKT--AVKQ---------GKWSLDSWKTKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPFEEINGVKLPSYKGDNINGDTFDEKSRIPDPHRLIRAYMQSA 219          
BLAST of FC917780 vs. ExPASy Swiss-Prot
Match: AROF_TOBAC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 7.502e-75
Identity = 136/210 (64.76%), Postives = 161/210 (76.67%), Query Frame = 3
Query:  183 NTTKPRSLVQPITAVHAAQPAKNSAAVKESSSSPAKASG------------KWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSA 776
            N+TKP   VQPI+A+H++  +KN     + SS P+  +             +W +E WK+KKALQLPEYP++ +L++VLKT+E+FPP+VFAG             MG AFLLQGGDCAESFKEFNANNIRDTFR+LLQMG VLMFGGQMP+IKVGRMAGQFAKPRSD FE KNGVKLPSY+GDN+NGDAFD KSR PDP+RLIRAYCQSA
Sbjct:   38 NSTKPVRFVQPISAIHSSDSSKNPIVSDKPSSKPSPPAATVTAAATTVTKTEWTVESWKSKKALQLPEYPNQEELQSVLKTIEEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSDNFEEKNGVKLPSYRGDNVNGDAFDAKSRTPDPQRLIRAYCQSA 247          
BLAST of FC917780 vs. ExPASy Swiss-Prot
Match: AROG_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.723e-74
Identity = 146/216 (67.59%), Postives = 162/216 (75.00%), Query Frame = 3
Query:  129 THTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNSAAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSA 776
            +H L +   QP FSL P      R    PI+AVHAA+P+K   AVK+         GKW+L+ WKTKKALQLPEYPD+ +LE+VLKTLE  PPLVFAG             +G AFLLQGGDCAESFKEFNANNIRDTFR+LLQM VVLMFGGQ+P+IKVGRMAGQFAKPRSDP E  NGVKLPSYKGDNINGD FDEKSR+PDP RLIRAY QSA
Sbjct:   18 SHLLHNPLPQPRFSLFPTTQHGRR---HPISAVHAAEPSKT--AVKQ---------GKWSLDSWKTKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPLEEINGVKLPSYKGDNINGDTFDEKSRIPDPHRLIRAYMQSA 219          
BLAST of FC917780 vs. ExPASy Swiss-Prot
Match: AROF_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2)

HSP 1 Score: 275.018 bits (702), Expect = 3.152e-73
Identity = 136/210 (64.76%), Postives = 164/210 (78.10%), Query Frame = 3
Query:  183 NTTKPRSLVQPITAVHAA----------QPAKNS--AAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSA 776
            N+TK    VQPI+AVH++          +P+K+S  AA   ++ +PA    +WA++ WK+KKALQLPEYP++ +L +VLKT+++FPP+VFAG             MG AFLLQGGDCAESFKEFNANNIRDTFR+LLQMG VLMFGGQMP+IKVGRMAGQFAKPRSD FE K+GVKLPSY+GDN+NGDAFD KSR PDP+RLIRAYCQSA
Sbjct:   37 NSTKTVRFVQPISAVHSSDSNKIPIVSDKPSKSSPPAATATTAPAPAVTKTEWAVDSWKSKKALQLPEYPNQEELRSVLKTIDEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIRAYCQSA 246          
BLAST of FC917780 vs. ExPASy Swiss-Prot
Match: AROG_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 7.021e-73
Identity = 135/209 (64.59%), Postives = 158/209 (75.60%), Query Frame = 3
Query:  186 TTKPRSLVQPITAVHAAQPAKNS------------AAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSA 776
            +TK    VQPI AVH++   KN             AA   ++ +PA    +WA++ WK+KKALQLPEYPD+ +L +VLKT+++FPP+VFAG             MG AFLLQGGDCAESFKEFNANNIRDTFR+LLQMG VLMFGGQMP+IKVGRMAGQFAKPRSD FE K+GVKLPSY+GDN+NGDAFD KSR PDP+RLIRAYCQSA
Sbjct:   38 STKTVRFVQPIAAVHSSDSNKNPIVSDKPTKSSPPAATATTAPAPAVTKTEWAVDSWKSKKALQLPEYPDQEELRSVLKTIDEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIRAYCQSA 246          
BLAST of FC917780 vs. ExPASy Swiss-Prot
Match: AROG_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2)

HSP 1 Score: 266.929 bits (681), Expect = 8.583e-71
Identity = 129/187 (68.98%), Postives = 149/187 (79.68%), Query Frame = 3
Query:  213 PITAVHAAQPAKNSAAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQS 773
            P+ AVH+  P K        S+  A AS KW+LE WK+KKALQLP+YPD+  +++VL+TL  FPP+VFAG             MG AF+LQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQ+P+IKVGRMAGQFAKPRSDPFE K+GVKLPSY+GDNINGDAFDEKSR+PDP R++RAY QS
Sbjct:   30 PVFAVHSTDPKK--------STQSASASVKWSLESWKSKKALQLPDYPDQKDVDSVLQTLSSFPPIVFAGEARKLEDKLGQAAMGQAFMLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQLPVIKVGRMAGQFAKPRSDPFEEKDGVKLPSYRGDNINGDAFDEKSRIPDPHRMVRAYTQS 208          
BLAST of FC917780 vs. ExPASy Swiss-Prot
Match: AROG_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.606e-69
Identity = 132/198 (66.67%), Postives = 153/198 (77.27%), Query Frame = 3
Query:  216 ITAVHAAQPAKNS----AAVKESSSSPAKAS-------GKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIK-VGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQS 773
            ++AVHAA PAK++    AA K SS S   A        GKW ++ WK KKALQLPEYP + +L++VLKT+E FPP+VFAG             MG AF+LQGGDCAESFKEFNANNIRDTFR+LLQMG VLMFGGQMP++K VGRMAGQFAKPRSD FE ++GVKLPSY+GDNINGD FDEKSRVPDP+R+IRAY QS
Sbjct:   38 VSAVHAADPAKSNGPVQAAAKASSPSTVAAPEKKPVGLGKWTVDSWKAKKALQLPEYPSQEELDSVLKTIETFPPVVFAGEARHLEERLADAAMGRAFVLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVVKVVGRMAGQFAKPRSDSFEERDGVKLPSYRGDNINGDTFDEKSRVPDPQRMIRAYAQS 235          
BLAST of FC917780 vs. ExPASy Swiss-Prot
Match: AROF_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 1.979e-67
Identity = 133/215 (61.86%), Postives = 155/215 (72.09%), Query Frame = 3
Query:  216 ITAVHAAQPAKNS-----AAVKESSSS-----------------PAKASGK------WALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSA 776
            + AVHAA+P+KN      +A K SS S                 PA A+ K      WA++ W+TKKALQLPEYP+ A+LE VLKT+E FPP+VFAG             MG AFLLQGGDCAESFKEFN NNIRDTFRVLLQM  VL FGGQMP+IKVGRMAGQFAKPRS+ FE ++GVKLPSY+GDNINGDAF+EKSR+PDP+R++RAY QSA
Sbjct:   38 VRAVHAAEPSKNPPVGVPSAAKTSSPSVAAPEKAPVAAAPAPVAPAPAATKQVAPARWAVDSWRTKKALQLPEYPNAAELEAVLKTIEAFPPIVFAGEARHLEERLADAAMGRAFLLQGGDCAESFKEFNGNNIRDTFRVLLQMSAVLTFGGQMPVIKVGRMAGQFAKPRSEAFEERDGVKLPSYRGDNINGDAFNEKSRIPDPQRMVRAYAQSA 252          
BLAST of FC917780 vs. ExPASy Swiss-Prot
Match: AROF_CATRO (Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic OS=Catharanthus roseus GN=DHS1 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.579e-40
Identity = 104/226 (46.02%), Postives = 128/226 (56.64%), Query Frame = 3
Query:  126 NTHTLASK------PHQPNFSLHPANTT---KPRSLVQPITAVHAAQPAKNSAAVKESSSSPAKAS---GKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGXXXXXXXXXXXXXMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYC 767
            NT  LASK      PHQP  +    +TT   KPRS      AVH  QP K    +  ++++  + S   G W  E WK+KKALQLPEYPD+ +L+ VLKT+E FPPLVFAG             MGNAFLLQGGDCAESFKE      R  F+        L FGGQ P+IKVGRMAGQFAKPR DPFE K+G+ L    G  +  +A+ +  ++     L+   C
Sbjct:    5 NTSALASKLLPSCKPHQPTLTFFSPSTTCQKKPRSSRPISAAVHVTQPPKTP--ISSATATKRRLSLLNGVW--ESWKSKKALQLPEYPDEGKLDGVLKTIEAFPPLVFAGEARSLEEKLAQAAMGNAFLLQGGDCAESFKELMPLYSR-YFQNTASDECRLTFGGQCPVIKVGRMAGQFAKPRLDPFEEKDGLWLSGANGWPVAWEAYCKLQQLSPSRALLLVVC 225          
The following BLAST results are available for this feature:
BLAST of FC917780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
AROF_ARATH8.015e-7768.12Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_SOLLC4.398e-7568.06Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_TOBAC7.502e-7564.76Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLTU3.723e-7467.59Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLTU3.152e-7364.76Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLLC7.021e-7364.59Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_ARATH8.583e-7168.98Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_ORYSJ3.606e-6966.67Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_ORYSJ1.979e-6761.86Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_CATRO1.579e-4046.02Probable phospho-2-dehydro-3-deoxyheptonate aldola... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA53BE01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA53BE01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917780 ID=FC917780; Name=FC917780; organism=Citrus clementina; type=EST; length=777bp
CTCCTTTTCAATCAATCATTCACTCTTCCGATTCCAGAGAGAACATTTAG
AATTAAAAAAAAAAAAGGACCCCGATGGCTCTCTCAAATGCATCATCAAC
TCTTTCTTCCAAGTCTCTCTATGCCAATACTCACACTCTTGCGTCCAAGC
CTCACCAACCAAATTTCTCTCTTCACCCCGCCAACACCACCAAACCAAGA
TCTCTAGTGCAACCCATCACGGCCGTCCATGCAGCTCAACCCGCCAAGAA
CTCTGCTGCTGTTAAGGAATCATCGTCGTCACCGGCAAAGGCGTCCGGGA
AATGGGCGCTGGAGGGATGGAAGACCAAGAAAGCCCTGCAGCTTCCTGAG
TACCCGGATAAAGCTCAGCTGGAGACTGTTTTGAAGACTCTGGAAGATTT
TCCTCCCCTGGTTTTTGCTGGTGAAGCAAGGAGCCTTGAGGAGAGGCTCG
CAGAGGCTGCCATGGGAAACGCTTTCTTGCTTCAGGGTGGTGACTGTGCT
GAGAGTTTCAAGGAGTTCAATGCTAATAATATTAGGGACACTTTCAGAGT
GTTGTTGCAGATGGGTGTTGTGCTTATGTTTGGCGGCCAAATGCCTATCA
TTAAGGTGGGAAGAATGGCGGGTCAATTTGCAAAGCCAAGATCAGATCCT
TTTGAGGTGAAGAATGGAGTGAAGCTGCCGAGCTACAAGGGAGACAACAT
CAATGGTGATGCTTTTGATGAGAAATCAAGAGTTCCAGACCCTGAAAGGT
TGATTAGGGCTTACTGCCAGTCTGCTG
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