FC917860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC917860 vs. ExPASy Swiss-Prot
Match: PGES2_DANRE (Prostaglandin E synthase 2 OS=Danio rerio GN=ptges2 PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 5.348e-60 Identity = 129/271 (47.60%), Postives = 171/271 (63.10%), Query Frame = 3 Query: 252 LPTDLVPKEVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYKKVPILMVDGE-QLVDSSAIIDQL-------DQKLT------PKRKADSPSGDD----------------------------EEKKWRGWVDNHLVHLLSPNIYRNTSEALESFDYITSSGNFSFTEKLTAKYAGAAAMYFVSKKLKKKYNI-TDERAALYEAAETWVDAL-NGREFLGGSKPNLADLAVFGVLRPIRYLRSGRDMVEHTRIGEWYTR 932 L TDL ++ LYQY+ CPFC+KV+AFLDY+ +PY++VEVNP+ ++EIKWS Y+KVPILMV+G QL DSS II L D+K++ P+ K+ + G D EE KWR W D+ LVHL+SPN+YR +EAL SFDYI G F E AKY GAAAM+ +SK+LK K+N+ D R LY+A WV A+ ++F+GG +PNLADLAVFGVLR + L+S DM+EHT++ +WY+R Sbjct: 101 LDTDL---KLTLYQYKTCPFCSKVRAFLDYHRLPYEIVEVNPVMRQEIKWSTYRKVPILMVNGTVQLNDSSVIISALKTYISSKDKKISEILACYPEMKSKNDRGKDVIEFGNKYWVMVHDADADQLYPGKDSRKEEIKWRTWADDWLVHLISPNVYRTPTEALASFDYIVREGKFGSFEGFFAKYFGAAAMWIISKRLKYKHNLQADVRQDLYKAVNDWVAAIGKNKQFMGGDEPNLADLAVFGVLRVMEGLQSFDDMMEHTKVKKWYSR 368
BLAST of FC917860 vs. ExPASy Swiss-Prot
Match: PGES2_MOUSE (Prostaglandin E synthase 2 OS=Mus musculus GN=Ptges2 PE=1 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 1.363e-55 Identity = 123/277 (44.40%), Postives = 160/277 (57.76%), Query Frame = 3 Query: 240 AKEPLPTDLVPKEVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYKKVPILMVDG----EQLVDSSAIIDQLDQKLT------------PKRKADSPSGDD----------------------------EEKKWRGWVDNHLVHLLSPNIYRNTSEALESFDYITSSGNFSFTEKLTAKYAGAAAMYFVSKKLKKKYNITDE-RAALYEAAETWVDAL-NGREFLGGSKPNLADLAVFGVLRPIRYLRSGRDMVEHTRIGEWYTR 932 A+ PL L ++ LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL+ +QL DSS II L L P KA + G + EE KWR W D+ LVHL+SPN+YR +EAL SFDYI G F E AKY GAAAMY +SK+LK ++++ D+ R LYEAA WV A+ R F+GG KPNLADLAV+GVLR + L + D++ H+ I WY R Sbjct: 91 AQLPLSNSL---QLTLYQYKTCPFCSKVRAFLDFHSLPYQVVEVNPVRRTEIKFSSYRKVPILVAQEGDSLQQLNDSSVIISALKTYLVSGQPLEEVITYYPPMKAMNDQGKEVTEFCNKYWPMLDEKEAQQMYGGKEARTEEMKWRQWADDWLVHLISPNVYRTPAEALASFDYIVREGKFGAVEAAMAKYVGAAAMYLISKRLKSRHHLQDDVRVDLYEAANKWVTAVGKDRPFMGGQKPNLADLAVYGVLRVMEGLEAFDDLMRHSHIQPWYLR 364
BLAST of FC917860 vs. ExPASy Swiss-Prot
Match: PGES2_HUMAN (Prostaglandin E synthase 2 OS=Homo sapiens GN=PTGES2 PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.325e-55 Identity = 120/265 (45.28%), Postives = 155/265 (58.49%), Query Frame = 3 Query: 276 EVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYKKVPILMVD----GEQLVDSSAIIDQLDQKLT------------PKRKADSPSGDD----------------------------EEKKWRGWVDNHLVHLLSPNIYRNTSEALESFDYITSSGNFSFTEKLTAKYAGAAAMYFVSKKLKKKYNITDE-RAALYEAAETWVDAL-NGREFLGGSKPNLADLAVFGVLRPIRYLRSGRDMVEHTRIGEWYTR 932 ++ LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL+ +QL DSS II L L P KA + G + EE KWR W D+ LVHL+SPN+YR +EAL SFDYI G F E AKY GAAAMY +SK+LK ++ + D R LYEAA+ WV A+ R F+GG KPNLADLAV+GVLR + L + D+++HT I WY R Sbjct: 101 QLTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVRRAEIKFSSYRKVPILVAQEGESSQQLNDSSVIISALKTYLVSGQPLEEIITYYPAMKAVNEQGKEVTEFGNKYWLMLNEKEAQQVYGGKEARTEEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGKFGAVEGAVAKYMGAAAMYLISKRLKSRHRLQDNVREDLYEAADKWVAAVGKDRPFMGGQKPNLADLAVYGVLRVMEGLDAFDDLMQHTHIQPWYLR 365
BLAST of FC917860 vs. ExPASy Swiss-Prot
Match: PGES2_MACFA (Prostaglandin E synthase 2 OS=Macaca fascicularis GN=PTGES2 PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 5.180e-55 Identity = 120/265 (45.28%), Postives = 155/265 (58.49%), Query Frame = 3 Query: 276 EVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYKKVPILMVD----GEQLVDSSAIIDQLDQKLT------------PKRKADSPSGDD----------------------------EEKKWRGWVDNHLVHLLSPNIYRNTSEALESFDYITSSGNFSFTEKLTAKYAGAAAMYFVSKKLKKKYNITDE-RAALYEAAETWVDAL-NGREFLGGSKPNLADLAVFGVLRPIRYLRSGRDMVEHTRIGEWYTR 932 ++ LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL+ +QL DSS II L L P KA + G + EE KWR W D+ LVHL+SPN+YR +EAL SFDYI G F E AKY GAAAMY +SK+LK ++ + D R LYEAA+ WV A+ R F+GG KPNLADLAV+GVLR + L + D+++HT I WY R Sbjct: 101 QLTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVLRAEIKFSSYRKVPILVAQEGESSQQLNDSSVIISALKTYLVSGQPLEEIITYYPAMKAVNDQGKEVTEFGNKYWLMLNEKEAQQVYSGKEARTEEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGKFGAVEGAVAKYMGAAAMYLISKRLKSRHRLQDNVREDLYEAADKWVAAVGKDRPFMGGQKPNLADLAVYGVLRVMEGLDAFDDLMQHTHIQPWYLR 365 The following BLAST results are available for this feature:
BLAST of FC917860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC917860 ID=FC917860; Name=FC917860; organism=Citrus clementina; type=EST; length=933bpback to top |