FC918003
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918003 vs. ExPASy Swiss-Prot
Match: YU88_ARATH (UPF0187 protein At3g61320, chloroplastic OS=Arabidopsis thaliana GN=At3g61320 PE=2 SV=2) HSP 1 Score: 250.751 bits (639), Expect = 7.801e-66 Identity = 146/273 (53.48%), Postives = 176/273 (64.47%), Query Frame = 2 Query: 62 SHFIPKTLLKLQPSITTLTFPSKSPNPLTFKTLSCLESQ-SQSETKTLTLISVLRAIPDWADRVKERGVKQKRTLYSHEKWVEHXXXXXXXXXXXXXXXXXXXXXXXPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDE-CIKDSLLRYIMAFPVALKGHVICDSDVSGXXXXXXXXXXXXXXXXSKHRPRCIIEFISQSLQLLNLEATKQNM 874 S+F ++LL+ + I + F KS N + S ES S ET T LI +LRA+PDWAD +KERG++QKR+LY+HEKWVEH PPV FT VAVVIASYNSA+ LPG P+LR+SSLPYQLTAPALALLLVFRTEASYSR+ +G+KAW IIAGTND A VI D+S DE IKD LLRYI AFPVALK HVI SD++ +KHRPRC+IEFISQS+QLL L+ K+++ Sbjct: 11 SNFTHRSLLESRFPIFSTGF-RKSVNLKPPRVSSGPESNDSGHETLTDKLIHLLRAVPDWADEIKERGMQQKRSLYTHEKWVEHRSSLRHVRHLLSSFSSRVILSLIPPVFFFTSVAVVIASYNSAVALDWLPGIFPILRSSSLPYQLTAPALALLLVFRTEASYSRYEEGRKAWVGIIAGTNDLARQVICSVDSSGDELIIKDLLLRYIAAFPVALKCHVIYGSDIARDLRNLIEADDLSLILQAKHRPRCVIEFISQSIQLLKLDDAKRDL 282
BLAST of FC918003 vs. ExPASy Swiss-Prot
Match: YU87_ARATH (UPF0187 protein At2g45870, chloroplastic OS=Arabidopsis thaliana GN=At2g45870 PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.738e-65 Identity = 136/254 (53.54%), Postives = 170/254 (66.93%), Query Frame = 2 Query: 125 SKSPNPLTFK-TLSCLESQSQSETKTLT--LISVLRAIPDWADRVKERGVKQKRTLYSHEKWVEHXXXXXXXXXXXXXXXXXXXXXXXPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDE-CIKDSLLRYIMAFPVALKGHVICDSDVSGXXXXXXXXXXXXXXXXSKHRPRCIIEFISQSLQLLNLEATKQNM 874 +++P L FK SC+ S +S+ L+ LIS+L+A+P+W+D +KER ++QKR+LY+HE WV H PPV FT VA++IA YNSA+D LP F PVLRAS LPYQLTAPALALLLVFRTEASYSRF G+KAW +II+GTND A +VIS S DE I+D+LLRYI+AFPVALK HVI SD++ SKHRPRC+I+FISQSLQLLNL++TK +M Sbjct: 29 ARAPKSLHFKFNPSCVSSGPKSDDSPLSEKLISLLKAVPNWSDGIKERRMQQKRSLYTHENWVRHRSSLRHLRHVSSSPSSRVILSLIPPVFFFTTVAILIAGYNSAVDLDWLPDFFPVLRASPLPYQLTAPALALLLVFRTEASYSRFEQGRKAWVKIISGTNDLARLVISSVHGSGDELIIRDALLRYIVAFPVALKCHVIYGSDIASDLKNVIEVDDLSLILQSKHRPRCVIQFISQSLQLLNLDSTKIDM 282 The following BLAST results are available for this feature:
BLAST of FC918003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC918003 ID=FC918003; Name=FC918003; organism=Citrus clementina; type=EST; length=877bpback to top |