FC918005

Overview
NameFC918005
Unique NameFC918005
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length862
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918005 vs. ExPASy Swiss-Prot
Match: PSBQ_SPIOL (Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.874e-73
Identity = 149/234 (63.68%), Postives = 176/234 (75.21%), Query Frame = 1
Query:    7 MAQAMASMAGLRGSSHSQAVLEGSFQLSGPHRLNAPSNSRVAVARPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPL-KERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 705
            MAQAMASMAGLRG+S  QAVLEGS Q+SG +RL+ P+ SRVAV + G  +RAQQ S E ETSRRAMLG VAAG+ASGSFV+AVLA+A PI V            T NSD+ RD  LP  K+RF++QPL P            +ILNVK+ ID+KAWP +QNDLRLRASYLRYDL T+ISAKPKDEK+SL+ LT KLF +I NLDHAAKIKS  EAEKYY +TVS +N+VL+K+G
Sbjct:    1 MAQAMASMAGLRGAS--QAVLEGSLQISGSNRLSGPTTSRVAVPKMGLNIRAQQVSAEAETSRRAMLGFVAAGLASGSFVKAVLAEARPIVVGPPPPLSGGLPGTENSDQARDGTLPYTKDRFYLQPLPPTEAAQRAKVSASEILNVKQFIDRKAWPSLQNDLRLRASYLRYDLKTVISAKPKDEKKSLQELTSKLFSSIDNLDHAAKIKSPTEAEKYYGQTVSNINEVLAKLG 232          
BLAST of FC918005 vs. ExPASy Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 2.874e-73
Identity = 149/235 (63.40%), Postives = 181/235 (77.02%), Query Frame = 1
Query:    7 MAQAMASMAGLRGSSHSQAVLEGSFQLSGPHRLNAPSNSRVAVA--RPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 705
            MAQA+ SMAGLRG+S  QAVLEGS Q++G +RLN    SRV+V   R G  +RAQQ  + PE+SRR+++GLVAAG+A GSFV+AV A+A PIKV            T NSD+ RD  L LK+RF+IQPLSP           K+I+NVK  IDKKAWPYVQNDLRLRASYLRYDLNT+ISAKPK+EKQSLK+LT KLFQTI NLD+AA+ KS+P+AEKYY+ETVS+LN+VL+K+G
Sbjct:    1 MAQAVTSMAGLRGAS--QAVLEGSLQINGSNRLNI---SRVSVGSQRTGLVIRAQQNVSVPESSRRSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGPPLPSGGLPGTDNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKLG 230          
BLAST of FC918005 vs. ExPASy Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 245.358 bits (625), Expect = 3.184e-64
Identity = 143/231 (61.90%), Postives = 168/231 (72.73%), Query Frame = 1
Query:   19 MASMAGLRGSSHSQAVLEGSFQLSGPHRLNAPSNSRVAVA-RPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXX-TLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 705
            MASM GL G+S   AVLEGS +++G  RLN   + RVAVA R    VRAQQ+    ETSRR+++GLVAAG+A GSFVQAVLADA  IKV             T NSD+ RD  L LK+RF++QPL P           KDI+NVK LID+KAWPYVQNDLR +ASYLRYDLNTIIS+KPKDEK+SLK+LT KLF TI NLD+AAK KS  +AEKYYAETVS LN+VL+K+G
Sbjct:    1 MASMGGLHGAS--PAVLEGSLKINGSSRLNG--SGRVAVAQRSRLVVRAQQSE---ETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKLG 224          
BLAST of FC918005 vs. ExPASy Swiss-Prot
Match: PSBQ_ONOVI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Onobrychis viciifolia GN=PSBQ PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.172e-58
Identity = 138/244 (56.56%), Postives = 165/244 (67.62%), Query Frame = 1
Query:    7 MAQAMASMAGLRGSSHSQAVLEGSFQL-SGPHRLNAPSNSRVAVARPGFTVRAQQ---------ASNEPETSRRAMLGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLK-NLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 705
            MAQAMAS            +LEGS QL SG +R  + S+SR       F VRAQQ         ++ +P+++RRAMLGLVA G+AS SFVQAVLA+A PIKV            TLNSDE RDL LPLKERF+IQPLSP           K+I+ VK+ ID+K      NDLRLRASYLRYDLNT+IS+KPK++KQSLK +  GKLFQ I NLD+AAK+KS P+AEKYYA+ VSTLNDVLSK+G
Sbjct:    1 MAQAMAS-----------GLLEGSLQLMSGSNR--SSSSSRTRGPAGVFIVRAQQQEQQQGMSSSAADPQSNRRAMLGLVATGLASASFVQAVLAEAKPIKVGGPPPPSGGLGGTLNSDEARDLKLPLKERFYIQPLSPTEAAQRQRESAKEIVAVKKFIDQKLGHMFINDLRLRASYLRYDLNTVISSKPKEQKQSLKESSAGKLFQDIDNLDYAAKLKSAPQAEKYYADAVSTLNDVLSKIG 231          
BLAST of FC918005 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.433e-56
Identity = 130/235 (55.32%), Postives = 158/235 (67.23%), Query Frame = 1
Query:    7 MAQAMASMAGLRGSSHSQAVLEGSFQL-SGPHRLNAPSNSRVAVARPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 705
            MAQAMASM GL     SQ V     QL +GP R  A   SR+AV      VRA  A+ + +T RRA+LGLVA G+A G+  QA LA+A  PIK+            TLNSD+ RD DLPL+ERF++QPL P           +DI+N+K LI+KK WP+V++DLRLRASYLRYDL T+I++KPKDEK+ LK+LTGKLF TI  LDHAAKIKS  EAEKYY  T S L DVL+K+G
Sbjct:    1 MAQAMASMTGL-----SQGV-----QLPAGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217          
BLAST of FC918005 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 1.433e-56
Identity = 130/235 (55.32%), Postives = 158/235 (67.23%), Query Frame = 1
Query:    7 MAQAMASMAGLRGSSHSQAVLEGSFQL-SGPHRLNAPSNSRVAVARPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 705
            MAQAMASM GL     SQ V     QL +GP R  A   SR+AV      VRA  A+ + +T RRA+LGLVA G+A G+  QA LA+A  PIK+            TLNSD+ RD DLPL+ERF++QPL P           +DI+N+K LI+KK WP+V++DLRLRASYLRYDL T+I++KPKDEK+ LK+LTGKLF TI  LDHAAKIKS  EAEKYY  T S L DVL+K+G
Sbjct:    1 MAQAMASMTGL-----SQGV-----QLPAGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217          
BLAST of FC918005 vs. ExPASy Swiss-Prot
Match: PSBQ1_MAIZE (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.213e-55
Identity = 128/235 (54.47%), Postives = 152/235 (64.68%), Query Frame = 1
Query:    7 MAQAMASMAGLRGSSHSQAVLEGSFQLSGPHRLNAPSNSRVAVARPGFTVRAQQASNE-PETSRRAMLGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 705
            MAQAMASM GL     SQ VL        P R  A S +R AV      VRA    +   +  RRA++GLVA G+  G+  QA  A+    IK+            TLNSD+ RD DLPLKERF++QPL P           +DI+N+K LIDKKAWPYVQNDLRLRASYLRYDL T+I++KPK+EK+SLK LTGKLF TI +LDHAAKIKSTPEAEKY+A T   L DVL+K+G
Sbjct:    1 MAQAMASMTGL-----SQGVL--------PSR-RADSRTRTAVV----IVRASAEGDAVAQAGRRAVIGLVATGIVGGALSQAARAETVKTIKIGAPPPPSGGLPGTLNSDQARDFDLPLKERFYLQPLPPAEAAARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKIKSTPEAEKYFAATKDALGDVLAKLG 217          
BLAST of FC918005 vs. ExPASy Swiss-Prot
Match: PSBQ2_MAIZE (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays GN=PSBQ2 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.615e-50
Identity = 117/234 (50.00%), Postives = 142/234 (60.68%), Query Frame = 1
Query:    7 MAQAMASMAGLRGSSHSQAVLEGSFQLSGPHRLNAPSNSRVAVARPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 705
            MAQAMASM GL     SQ V   +          A S +R AV     +    + +  P   R      + A  +S    QAV A+    IK+            TLNSD+ RD DLPLKERF++QPL P           +DI+N+K LIDKKAWPYVQNDLRLRASYLRYDL T+I++KPK+EK+SLK LTGKLF TI +LDHAAK+KSTPEAEKY+A T   L DVL+K+G
Sbjct:    1 MAQAMASMTGL-----SQGVCPAA----------ADSRTRTAVVVVRASAEGDRCAGGPRCDR------LVATASSPPLSQAVHAETVKTIKIGAPPPPSGGLPGTLNSDQTRDFDLPLKERFYLQPLPPAEAVARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKMKSTPEAEKYFAATKDALGDVLAKLG 213          
The following BLAST results are available for this feature:
BLAST of FC918005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PSBQ_SPIOL2.874e-7363.68Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ2_ARATH2.874e-7363.40Oxygen-evolving enhancer protein 3-2, chloroplasti... [more]
PSBQ1_ARATH3.184e-6461.90Oxygen-evolving enhancer protein 3-1, chloroplasti... [more]
PSBQ_ONOVI1.172e-5856.56Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ_ORYSJ1.433e-5655.32Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ_ORYSI1.433e-5655.32Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ1_MAIZE1.213e-5554.47Oxygen-evolving enhancer protein 3-1, chloroplasti... [more]
PSBQ2_MAIZE7.615e-5050.00Oxygen-evolving enhancer protein 3-2, chloroplasti... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA13DD07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA13DD07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918005 ID=FC918005; Name=FC918005; organism=Citrus clementina; type=EST; length=862bp
TGAAAAATGGCACAAGCTATGGCGTCAATGGCTGGCTTACGTGGATCCTC
CCACTCGCAGGCTGTTCTTGAAGGTAGCTTCCAGCTCAGTGGCCCACACC
GCTTGAACGCCCCTAGCAACAGCAGAGTTGCTGTGGCTCGCCCTGGTTTC
ACTGTTAGAGCCCAGCAGGCATCAAACGAGCCTGAAACTAGCCGCCGTGC
TATGCTTGGTCTTGTTGCTGCAGGTGTGGCCTCAGGTTCCTTTGTTCAAG
CTGTACTTGCTGATGCCACTCCCATCAAAGTTGGTCCTCCTCCCCCACCC
TCTGGCGGATTGCCTGGAACGTTGAACTCCGATGAGCCAAGAGACCTGGA
TCTGCCACTGAAGGAGAGGTTCTTCATCCAACCACTTAGTCCAGCCCAGG
CAGCAGAGAGAGCAAAGGCGTCAGCAAAGGATATTCTTAATGTCAAGGAA
TTAATAGACAAGAAGGCCTGGCCCTATGTTCAGAATGATCTCCGTCTCAG
GGCCTCATACCTTCGCTATGACCTCAACACTATCATTTCTGCTAAGCCCA
AAGATGAGAAACAATCCCTCAAGAACCTCACTGGAAAGCTCTTCCAGACC
ATCGGCAATCTTGACCATGCGGCAAAGATTAAGAGCACTCCTGAAGCAGA
GAAATACTATGCGGAGACTGTATCTACCCTGAACGATGTTCTCTCCAAGG
TTGGCTAAGCAGAATTAATATAATCTGATGTAAACTATATTTTTCATTTT
GTGAGGCAACAACTTCTGTGAATTTTATTGCAAGCTGACGTTCCGCTCAA
AGTATCGAGAATAATTTGTCCAGGGTGAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA
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