FC918044
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918044 vs. ExPASy Swiss-Prot
Match: CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 5.302e-94 Identity = 185/273 (67.77%), Postives = 204/273 (74.73%), Query Frame = 1 Query: 109 SFLQAPMAALVPSTSVHS------LRSKSTRSLKTF-------CSAKIPNPMPAHINPNDPFLSKLXXXXXXSPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSATYNEHRXXXXXXXXXXXXXHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTG 888 S LQA M +L+P +S S S R+LKTF SAKIP P INP DPFLS L SPE +NRP N+ PYLDI+DSP LM+SPAQVERS YNEHR GRIVYIGMPLVPAVTELVVAELMYLQW+DPK PIY+YINSTGTTRDDGE+VGMESEGFAIYD+LMQ+K EVHTV VGAAIG ACLLL+AGTKGKRFMMPHAK MIQQPR+PSSGL+PASDVLIRAKE + NRD LV+LL+KHTG Sbjct: 3 SCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMPP---INPKDPFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTG 272
BLAST of FC918044 vs. ExPASy Swiss-Prot
Match: CLPR_SYNE7 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942) GN=clpR PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.220e-33 Identity = 69/153 (45.10%), Postives = 106/153 (69.28%), Query Frame = 1 Query: 460 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTG 888 RI+Y+GMPL + VTEL++A+L+YL++ +P+ PIY YINSTGT+ G+++G E+E FAI DT+ +K VHT+ +G A+G A ++L+ GT G R +PHA I++ QPR + G ASD+ IRAKE + N+ T++++ A++TG Sbjct: 33 RIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPGNRASLPHATIVLNQPRTGAQG--QASDIQIRAKEVLANKRTMLEIFARNTG 183
BLAST of FC918044 vs. ExPASy Swiss-Prot
Match: CLPR_SYNY3 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803) GN=clpR PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.519e-32 Identity = 72/153 (47.06%), Postives = 106/153 (69.28%), Query Frame = 1 Query: 460 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTG 888 RIVY+GMPL + VT+L++A+L+YLQ+ DP PIY YINSTGT+ G++VG E+E FAI DTL +K VHT+ +G A+G A ++L++GTKG R +PHA I++ Q R + G A+D+ IRAKE + N+ T++++L+ +TG Sbjct: 31 RIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSSGTKGYRASLPHATIVLNQNRTGAQG--QATDIQIRAKEVISNKQTMLEILSLNTG 181
BLAST of FC918044 vs. ExPASy Swiss-Prot
Match: CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.381e-31 Identity = 101/270 (37.41%), Postives = 142/270 (52.59%), Query Frame = 1 Query: 97 AMSTSF--LQAPMAALVPSTSVHSLRSK----STRSLKTFCSAKIPNPMPAHINPNDPFLSKLXXXXXXSPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSATYNEHRXXXXXXXXXXXXXHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTG 888 A +TSF L+A +A++PS S +LRSK S+ SL+ S +P +D +KL +P F + G + + + + P S + RIVY+GM LVP+VTEL++AE +YLQ+ D + PIYLYINSTGTT+ +GE +G ++E FAIYD + +K + T+ VG A G A LLL AG KG R +P + IMI+QP G A+DV I KE + +VKL +KH G Sbjct: 6 ATATSFTTLRARTSAIIPS-STRNLRSKPRFSSSSSLRASLSNGFLSPYTGGSISSDLCGAKLRAESL-NPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKN-----------------RIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-NGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQG--QATDVEIARKEIKHIKTEMVKLYSKHIG 253
BLAST of FC918044 vs. ExPASy Swiss-Prot
Match: CLPR1_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana GN=CLPR1 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.573e-29 Identity = 69/144 (47.92%), Postives = 96/144 (66.67%), Query Frame = 1 Query: 460 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL-PSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTG 888 RI Y+GMP+VPAVTEL+VA+ M+L + +P PIYLYINS GT + E+VG E+E +AI DT+ K +V+T+ G A G A +LL+ G KG R + PH+ + P++ SSG A D+ I+AKE N + ++LLAK TG Sbjct: 180 RICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNRSSG--AAIDMWIKAKELDANTEYYIELLAKGTG 321
BLAST of FC918044 vs. ExPASy Swiss-Prot
Match: CLPP_THEYD (ATP-dependent Clp protease proteolytic subunit OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=clpP PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.509e-27 Identity = 67/143 (46.85%), Postives = 92/143 (64.34%), Query Frame = 1 Query: 460 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTG 888 RI++IG + V +V+A+L++LQ DP+ I++YINS G GM S G AIYDT+ +K ++ T +G A MAC+LLAAGTKGKRF +PH+++MI QP G A+DV I AKE + +D L +LAKHTG Sbjct: 28 RIIFIGTEINDHVANVVIAQLLFLQTEDPEKDIHIYINSPG---------GMVSSGLAIYDTMQYVKPDIATYCIGQASSMACVLLAAGTKGKRFALPHSRVMIHQPIGGFYG--QATDVEIHAKEILKMKDLLNNILAKHTG 159
BLAST of FC918044 vs. ExPASy Swiss-Prot
Match: CLPP_THESQ (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga sp. (strain RQ2) GN=clpP PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.509e-27 Identity = 66/143 (46.15%), Postives = 92/143 (64.34%), Query Frame = 1 Query: 460 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTG 888 RIV++G P+ V LV+A+L++L+ DP +YLYINS G G + G AIYDT+ +KC+V T+ VG A MA +LLAAG KGKR+ +P+A+IMI QP + G PA DV I +E + +D L ++L+KHTG Sbjct: 37 RIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG---------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEG--PAKDVEIITRELLRIKDLLNRILSKHTG 168
BLAST of FC918044 vs. ExPASy Swiss-Prot
Match: CLPP_THEP1 (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=clpP PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.509e-27 Identity = 66/143 (46.15%), Postives = 92/143 (64.34%), Query Frame = 1 Query: 460 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTG 888 RIV++G P+ V LV+A+L++L+ DP +YLYINS G G + G AIYDT+ +KC+V T+ VG A MA +LLAAG KGKR+ +P+A+IMI QP + G PA DV I +E + +D L ++L+KHTG Sbjct: 37 RIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG---------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEG--PAKDVEIITRELLRIKDLLNRILSKHTG 168
BLAST of FC918044 vs. ExPASy Swiss-Prot
Match: CLPP_THEMA (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga maritima GN=clpP PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.509e-27 Identity = 66/143 (46.15%), Postives = 92/143 (64.34%), Query Frame = 1 Query: 460 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTG 888 RIV++G P+ V LV+A+L++L+ DP +YLYINS G G + G AIYDT+ +KC+V T+ VG A MA +LLAAG KGKR+ +P+A+IMI QP + G PA DV I +E + +D L ++L+KHTG Sbjct: 37 RIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG---------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEG--PAKDVEIITRELLRIKDLLNRILSKHTG 168
BLAST of FC918044 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJB (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. GN=clpP2 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.006e-25 Identity = 62/143 (43.36%), Postives = 89/143 (62.24%), Query Frame = 1 Query: 460 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLAKHTG 888 RI+++G + + L+VA+++YL+ DP+ IYLYINS G G G AIYDT+ ++ +V T+ +G A M LLA GTKGKR +PHA+IMI QP + G PA+D+ I+AKE + +++L LLA HTG Sbjct: 26 RIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPG---------GSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQG--PATDIEIQAKEILFIKNSLNSLLAYHTG 157 The following BLAST results are available for this feature:
BLAST of FC918044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC918044 ID=FC918044; Name=FC918044; organism=Citrus clementina; type=EST; length=889bpback to top |