FC918047
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918047 vs. ExPASy Swiss-Prot
Match: YIF1B_RAT (Protein YIF1B OS=Rattus norvegicus GN=Yif1b PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.150e-11 Identity = 41/100 (41.00%), Postives = 57/100 (57.00%), Query Frame = 1 Query: 358 ILGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITE--PVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGK 645 + E V NI R+ S +YYF V+ YV KL +++FP+LH+ + + PV P +DINAPDLYIP MAF TY+++AG LG Q + Sbjct: 85 LAAQGKELVDKNIDRFIPVSKLKYYFAVDTVYVGKKLGLLVFPYLHQDWEVQYQQDTPVA-------PRFDINAPDLYIPAMAFITYILVAGLALGTQDR 177
BLAST of FC918047 vs. ExPASy Swiss-Prot
Match: YIF1B_MOUSE (Protein YIF1B OS=Mus musculus GN=Yif1b PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.150e-11 Identity = 41/100 (41.00%), Postives = 57/100 (57.00%), Query Frame = 1 Query: 358 ILGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITE--PVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGK 645 + E V NI R+ S +YYF V+ YV KL +++FP+LH+ + + PV P +DINAPDLYIP MAF TY+++AG LG Q + Sbjct: 85 LAAQGKELVDKNIDRFIPVSKLKYYFAVDTVYVGKKLGLLVFPYLHQDWEVQYQQDTPVA-------PRFDINAPDLYIPAMAFITYILVAGLALGTQDR 177
BLAST of FC918047 vs. ExPASy Swiss-Prot
Match: YIF1B_HUMAN (Protein YIF1B OS=Homo sapiens GN=YIF1B PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.962e-11 Identity = 40/100 (40.00%), Postives = 56/100 (56.00%), Query Frame = 1 Query: 358 ILGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITE--PVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGK 645 + E V NI R+ + +YYF V+ YV KL ++ FP+LH+ + + PV P +D+NAPDLYIP MAF TYV++AG LG Q + Sbjct: 88 LAAQGKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVA-------PRFDVNAPDLYIPAMAFITYVLVAGLALGTQDR 180
BLAST of FC918047 vs. ExPASy Swiss-Prot
Match: YF1BA_XENLA (Protein YIF1B-A OS=Xenopus laevis GN=yif1b-A PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.563e-11 Identity = 39/100 (39.00%), Postives = 56/100 (56.00%), Query Frame = 1 Query: 358 ILGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITE--PVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGK 645 + E + NI R S +YYF V+ YV K+ +++FP++H+ R + PV P +DINAPDLYIP MAF TY+++AG LG Q + Sbjct: 74 LASQGKEMMDKNIDRIIPVSKIKYYFAVDTVYVGKKIGLLMFPYMHQDWEVRYQQDTPVA-------PRFDINAPDLYIPVMAFVTYILVAGLALGTQSR 166
BLAST of FC918047 vs. ExPASy Swiss-Prot
Match: YIF1B_XENTR (Protein YIF1B OS=Xenopus tropicalis GN=yif1b PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.347e-11 Identity = 39/100 (39.00%), Postives = 56/100 (56.00%), Query Frame = 1 Query: 358 ILGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITE--PVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGK 645 + E + NI R S +YYF V+ YV K+ +++FP++H+ R + PV P +DINAPDLYIP MAF TY+++AG LG Q + Sbjct: 74 LASQGKEMMDKNIDRIIPVSKIKYYFAVDTVYVGKKIGLLMFPYMHQDWEVRYQQDTPVA-------PRFDINAPDLYIPVMAFITYILVAGLALGTQSR 166
BLAST of FC918047 vs. ExPASy Swiss-Prot
Match: YF1BB_XENLA (Protein YIF1B-B OS=Xenopus laevis GN=yif1b-B PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.347e-11 Identity = 39/100 (39.00%), Postives = 56/100 (56.00%), Query Frame = 1 Query: 358 ILGSSSEYVQSNISRYF--SDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITE--PVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQGK 645 + E + NI R S +YYF V+ YV K+ +++FP++H+ R + PV P +DINAPDLYIP MAF TY+++AG LG Q + Sbjct: 74 LASQGKEMMDKNIDRIIPVSKIKYYFAVDTVYVGKKIGLLMFPYMHQDWEVRYQQDTPVA-------PRFDINAPDLYIPVMAFITYILVAGLALGTQSR 166
BLAST of FC918047 vs. ExPASy Swiss-Prot
Match: YIF1A_HUMAN (Protein YIF1A OS=Homo sapiens GN=YIF1A PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.457e-11 Identity = 40/96 (41.67%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 358 ILGSSSEYVQSNISRYFSDPQ--YYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQ 639 I + V + R+ S + Y+F V+ YV KL +++FP+ H+ +W E R + PP D+NAPDLYIP MAF TYV+LAG LG+Q Sbjct: 70 IASHGKDMVHKELHRFVSVSKLKYFFAVDTAYVAKKLGLLVFPYTHQ-NW----EVQYSRDAPLPPRQDLNAPDLYIPTMAFITYVLLAGMALGIQ 160
BLAST of FC918047 vs. ExPASy Swiss-Prot
Match: YIF1A_DANRE (Protein YIF1A OS=Danio rerio GN=yif1a PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.457e-11 Identity = 44/140 (31.43%), Postives = 65/140 (46.43%), Query Frame = 1 Query: 226 NMGTQPGPGMPRPAADAQPNPFGNAFXXXXXXXXXXXXXXXXEKILGSSSEYVQSNISRYFS--DPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQ 639 NM P G + +P NA + + V I+R+ S +Y+F V+ +YV KL +++FP+ H+ R R + P +D+NAPDLYIP MAF TY++LAG LG+Q Sbjct: 48 NMAEMPAGGQEPGVGNIFADPMANA------------AMMYGSTLANQGKDIVNKEINRFMSVNKLKYFFAVDTKYVMKKLLLLMFPYTHQDWEVRYH-----RDTPLTPRHDVNAPDLYIPTMAFITYILLAGMALGIQ 170
BLAST of FC918047 vs. ExPASy Swiss-Prot
Match: YIF1A_BOVIN (Protein YIF1A OS=Bos taurus GN=YIF1A PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.739e-11 Identity = 46/137 (33.58%), Postives = 64/137 (46.72%), Query Frame = 1 Query: 235 TQPGPGMPRPAADAQPNPFGNAFXXXXXXXXXXXXXXXXEKILGSSSEYVQSNISRYFS--DPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFTLGLQ 639 +QPG G P P AD N I + + + R+ S +Y+F V+ YV KL +++FP+ H+ + + V PP D+NAPDLYIP MAF TYV+LAG LG+Q Sbjct: 35 SQPG-GYPAPGADVAFN-----VNHLLGDPMANMAMAYGSSIASHGKDMMNKELHRFVSVNKLKYFFAVDTAYVAKKLGLLVFPYTHQNWEVQYSRDVP-----LPPRQDLNAPDLYIPTMAFITYVLLAGMALGIQ 160 The following BLAST results are available for this feature:
BLAST of FC918047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC918047 ID=FC918047; Name=FC918047; organism=Citrus clementina; type=EST; length=898bpback to top |