FC918050

Overview
NameFC918050
Unique NameFC918050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length875
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918050 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.659e-17
Identity = 42/63 (66.67%), Postives = 51/63 (80.95%), Query Frame = 1
Query:   19 VNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIGD 201
            VN+YPKCPQPDLTLGL  H+DPG +TLLL D QV GLQ  +  G++WITVKP + AF+VN+GD
Sbjct:  197 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGESWITVKPVEGAFVVNLGD 258          
BLAST of FC918050 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.530e-16
Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = 1
Query:   19 VNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIGD 201
            VNFYPKCP+PDLTLGL  H+DPG +TLLL D QV GLQ  K  G  WITV+P + AF+VN+GD
Sbjct:  202 VNFYPKCPEPDLTLGLKRHTDPGTITLLLQD-QVGGLQATKDNGKTWITVQPVEGAFVVNLGD 263          
BLAST of FC918050 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.530e-16
Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = 1
Query:   19 VNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIGD 201
            VNFYPKCPQPDLTLGL  H+DPG +TLLL D QV GLQ  +  G  WITV+P + AF+VN+GD
Sbjct:  200 VNFYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDDGKTWITVQPVEGAFVVNLGD 261          
BLAST of FC918050 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.305e-16
Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 1
Query:   19 VNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIGD 201
            VN+YPKCPQPDLTLGL  H+DPG +TLLL D QV GLQ  +  G+ WITV+P + AF+VN+GD
Sbjct:  198 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDDGNTWITVQPVEGAFVVNLGD 259          
BLAST of FC918050 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.637e-16
Identity = 41/63 (65.08%), Postives = 49/63 (77.78%), Query Frame = 1
Query:   19 VNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIGD 201
            VN+YPKCPQPDLTLGL  H+DPG +TLLL D QV GLQ  +  G  WITV+P + AF+VN+GD
Sbjct:  199 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDNGKTWITVQPVEGAFVVNLGD 260          
BLAST of FC918050 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.362e-16
Identity = 41/63 (65.08%), Postives = 49/63 (77.78%), Query Frame = 1
Query:   19 VNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIGD 201
            VNFYP+CPQPDLTLGL  H+DPG +TLLL D QV GLQ  +  G  WITV+P + AF+VN+GD
Sbjct:  200 VNFYPQCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGKTWITVQPVEGAFVVNLGD 261          
BLAST of FC918050 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.615e-16
Identity = 41/63 (65.08%), Postives = 48/63 (76.19%), Query Frame = 1
Query:   19 VNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIGD 201
            VN+YPKCPQPDLTLGL  H+DPG +TLLL D QV GLQ  +  G  WITV+P   AF+VN+GD
Sbjct:  200 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGKTWITVQPVPGAFVVNLGD 261          
BLAST of FC918050 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.256e-15
Identity = 35/67 (52.24%), Postives = 50/67 (74.63%), Query Frame = 1
Query:   13 LRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQV 213
            +R+N+YP CPQPD  +GL+ HSD  GLT+L+  + V GLQ++K   W+ VKP  +AFIVNIGD +++
Sbjct:  213 MRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEI 279          
BLAST of FC918050 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.256e-15
Identity = 41/63 (65.08%), Postives = 48/63 (76.19%), Query Frame = 1
Query:   19 VNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIGD 201
            VNFYP+CPQPDLTLGL  H+DPG +TLLL D  V GLQ  +  G NWITV+P   AF+VN+GD
Sbjct:  202 VNFYPRCPQPDLTLGLKRHTDPGTITLLLQD-LVGGLQATRDGGKNWITVQPISGAFVVNLGD 263          
BLAST of FC918050 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.142e-15
Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 1
Query:   19 VNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIGD 201
            VN+YPKCPQP+LTLGL  H+DPG +TLLL D QV GLQ  +  G  WITV+P + AF+VN+GD
Sbjct:  200 VNYYPKCPQPNLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGKTWITVQPVEGAFVVNLGD 261          
The following BLAST results are available for this feature:
BLAST of FC918050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
FL3H_CALCH6.659e-1766.67Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
FL3H_PETHY2.530e-1666.67Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_MALDO2.530e-1666.67Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
FL3H_MATIN3.305e-1665.08Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_ARATH5.637e-1665.08Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FL3H_VITVI7.362e-1665.08Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
FL3H_DIACA9.615e-1665.08Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
SRG1_ARATH1.256e-1552.24Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
FL3H_HORVU1.256e-1565.08Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
FL3H_PETCR2.142e-1563.49Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA8CA10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA8CA10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918050 ID=FC918050; Name=FC918050; organism=Citrus clementina; type=EST; length=875bp
ATTGGAGCCTGTTTGAGGGTTAATTTTTATCCAAAGTGCCCGCAGCCCGA
CTTAACACTTGGCTTGTCGTCGCATTCGGACCCCGGCGGCCTGACCCTAC
TCTTGCCGGACCATCAAGTCACCGGTCTTCAAGTCCGCAAAGGCGATAAT
TGGATCACCGTGAAGCCGGCCAAGCATGCTTTCATCGTCAACATTGGCGA
TCAAATTCAGGTGAGTTATTTATTACTTCCTAATTTTTTTTCTTTTTATT
TTTAATTTTTAATTTAATTCCGTCTTGCTTGATTAGTCATAAAAGTGAGA
AGTGTTTGTATGTTTTTATCAATTGAACAACTGAAGCACATGGAGTGATG
GAATTGGTGGGGGTCGCTTTTGGTGGGCTAATTAATGTCTAGTCATCAAA
CTTTAGTAAAAAATAAGTTTATAGTAAAAACTTCAGATTCTATTTTTTTT
TTTCATTTAGTCAACAAGTTATTTTTCTTGTTTATCCAATTGCCAATTTT
TTTTTTTTAATGAGTTGTCGATCTTCCAAATTTTATAGTGGATAATCTTT
GATTATTGCATGGGATAAGGCAATAAAATGATATACCGATTATTACGCAT
TTCAGTCTATTTTTCCCCAACATTTTTACACGTGCTACCTTAGAAAAGTA
TTTGCTCTCATCCTTGTCACTTTCAACTGAATTATTCTCACCCCACCTAG
TTGCTTTAGCAACTTGAATCCGAGTCCCATACTCCCATATTCTCAACGTG
TTTAAAAATCAAAGAAAGAAAAAGTTTTGTTGGAGGCCGACATTCACTCC
ACAGATGGTTCCAGAGAAAAATACCAGCGTGAATGACGCGTCGTCAAGTA
TACGACAAACTTTCTAAAAATACAA
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