FC918054
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918054 vs. ExPASy Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 2.370e-68 Identity = 123/177 (69.49%), Postives = 146/177 (82.49%), Query Frame = 1 Query: 1 STSPTAAISRWKYNVSRRYQHLLDKSVPHVLHRWVVCLAVVSIYAVRVYLVQGFYIITYGLGIYLLNLLMGFLSPQIDPEYS--DGPTLPTRGSDEFRPFVRRLPEFKFWYCVTRSFCIGFVLTFFSAFDVPVFWPILLFYWLMLFTLTMRRQIMHMIKYRYVPFSLGKQRYDGKRP 525 S+SP A++R + S+R QHLLDK+VPHVL+RW+ CL VV IY VRVY V+GFYIITY +GIYLLNL++ FLSPQ DPE S G +LPTR SDE+RPFVRRLPEFKFW + R+F IGF++TFF FDVPVFWPILLFYW+MLF LTMR+QI HMIKYRYVPFS GK++Y GK+P Sbjct: 30 SSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITYAIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFIIGFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKKQY-GKKP 205
BLAST of FC918054 vs. ExPASy Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=2 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 1.301e-66 Identity = 115/176 (65.34%), Postives = 139/176 (78.98%), Query Frame = 1 Query: 1 STSPTAAISRWKYNVSRRYQHLLDKSVPHVLHRWVVCLAVVSIYAVRVYLVQGFYIITYGLGIYLLNLLMGFLSPQIDPE---YSDGPTLPTRGSDEFRPFVRRLPEFKFWYCVTRSFCIGFVLTFFSAFDVPVFWPILLFYWLMLFTLTMRRQIMHMIKYRYVPFSLGKQRYDGK 519 S S + + + R YQH LDK+ PH +RW+ L V IY +RVY +QGFYII YGLGIYLLNLL+GFLSP +DPE SDGP+LPTRGSDEF+PF+RRLPEFKFWY +T++FCI F++TFFS FDVPVFWPILL YW++LF LTMRRQI HMIKY+Y+PFS GKQ+Y G+ Sbjct: 8 SGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQGFYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKYGGR 183
BLAST of FC918054 vs. ExPASy Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=2 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 4.626e-64 Identity = 111/176 (63.07%), Postives = 139/176 (78.98%), Query Frame = 1 Query: 1 STSPTAAISRWKYNVSRRYQHLLDKSVPHVLHRWVVCLAVVSIYAVRVYLVQGFYIITYGLGIYLLNLLMGFLSPQIDPEY--SDGPTLPTRGSDEFRPFVRRLPEFKFWYCVTRSFCIGFVLTFFSAFDVPVFWPILLFYWLMLFTLTMRRQIMHMIKYRYVPFSLGKQRYDGKR 522 S S + + + R YQ+ LDK+ PH +RW+ L IY +RVY + GFYII+YGLGIYLLNLL+GFLSP +DPE SDG TLPTRGSDEF+PF+RRLPEFKFWY +T++FCI F++TFFS FDVPVFWPILL YW++LF LTMRRQI HMIK++Y+PFS+GKQ+Y G++ Sbjct: 8 SGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHGFYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQKYSGRK 183
BLAST of FC918054 vs. ExPASy Swiss-Prot
Match: RER1_BOVIN (Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 1.492e-54 Identity = 97/172 (56.40%), Postives = 128/172 (74.42%), Query Frame = 1 Query: 16 AAISRWKYNVSRRYQHLLDKSVPHVLHRWVVCLAVVSIYAVRVYLVQGFYIITYGLGIYLLNLLMGFLSPQIDP----EYSDGPTLPTRGSDEFRPFVRRLPEFKFWYCVTRSFCIGFVLTFFSAFDVPVFWPILLFYWLMLFTLTMRRQIMHMIKYRYVPFSLGKQRYDGK 519 + + R+ + + YQ LDKS PH RWVV L + IY +RVYL+QG+YI+TY LGIY LNL + FLSP++DP + DGP+LPT+ ++EFRPF+RRLPEFKFW+ T+ + V TFF AF+VPVFWPIL+ Y++MLF +TM+RQI HMIKYRY+PF+ GK+ Y GK Sbjct: 16 SVVYRFFTRLGQIYQSWLDKSTPHTAVRWVVTLGLSFIYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRTYKGK 187
BLAST of FC918054 vs. ExPASy Swiss-Prot
Match: RER1_RAT (Protein RER1 OS=Rattus norvegicus GN=Rer1 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.544e-54 Identity = 95/172 (55.23%), Postives = 129/172 (75.00%), Query Frame = 1 Query: 16 AAISRWKYNVSRRYQHLLDKSVPHVLHRWVVCLAVVSIYAVRVYLVQGFYIITYGLGIYLLNLLMGFLSPQIDP----EYSDGPTLPTRGSDEFRPFVRRLPEFKFWYCVTRSFCIGFVLTFFSAFDVPVFWPILLFYWLMLFTLTMRRQIMHMIKYRYVPFSLGKQRYDGK 519 + + R+ + + YQ LDKS P+ RWVV L + +Y +RVYL+QG+YI+TY LGIY LNL + FLSP++DP + DGP+LPT+ ++EFRPF+RRLPEFKFW+ T+ + + TFF AF+VPVFWPIL+ Y++MLF +TM+RQI HMIKYRY+PF+ GK+RY GK Sbjct: 16 SVVYRFFSRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMICTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRYKGK 187
BLAST of FC918054 vs. ExPASy Swiss-Prot
Match: RER1_PONAB (Protein RER1 OS=Pongo abelii GN=RER1 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.544e-54 Identity = 96/172 (55.81%), Postives = 129/172 (75.00%), Query Frame = 1 Query: 16 AAISRWKYNVSRRYQHLLDKSVPHVLHRWVVCLAVVSIYAVRVYLVQGFYIITYGLGIYLLNLLMGFLSPQIDP----EYSDGPTLPTRGSDEFRPFVRRLPEFKFWYCVTRSFCIGFVLTFFSAFDVPVFWPILLFYWLMLFTLTMRRQIMHMIKYRYVPFSLGKQRYDGK 519 + + R+ + + YQ LDKS P+ RWVV L + +Y +RVYL+QG+YI+TY LGIY LNL + FLSP++DP + DGP+LPT+ ++EFRPF+RRLPEFKFW+ T+ + V TFF AF+VPVFWPIL+ Y++MLF +TM+RQI HMIKYRY+PF+ GK+RY GK Sbjct: 16 SVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRYRGK 187
BLAST of FC918054 vs. ExPASy Swiss-Prot
Match: RER1_MOUSE (Protein RER1 OS=Mus musculus GN=Rer1 PE=1 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.544e-54 Identity = 95/172 (55.23%), Postives = 129/172 (75.00%), Query Frame = 1 Query: 16 AAISRWKYNVSRRYQHLLDKSVPHVLHRWVVCLAVVSIYAVRVYLVQGFYIITYGLGIYLLNLLMGFLSPQIDP----EYSDGPTLPTRGSDEFRPFVRRLPEFKFWYCVTRSFCIGFVLTFFSAFDVPVFWPILLFYWLMLFTLTMRRQIMHMIKYRYVPFSLGKQRYDGK 519 + + R+ + + YQ LDKS P+ RWVV L + +Y +RVYL+QG+YI+TY LGIY LNL + FLSP++DP + DGP+LPT+ ++EFRPF+RRLPEFKFW+ T+ + + TFF AF+VPVFWPIL+ Y++MLF +TM+RQI HMIKYRY+PF+ GK+RY GK Sbjct: 16 SVVYRFFSRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMICTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRYKGK 187
BLAST of FC918054 vs. ExPASy Swiss-Prot
Match: RER1_HUMAN (Protein RER1 OS=Homo sapiens GN=RER1 PE=1 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.544e-54 Identity = 96/172 (55.81%), Postives = 129/172 (75.00%), Query Frame = 1 Query: 16 AAISRWKYNVSRRYQHLLDKSVPHVLHRWVVCLAVVSIYAVRVYLVQGFYIITYGLGIYLLNLLMGFLSPQIDP----EYSDGPTLPTRGSDEFRPFVRRLPEFKFWYCVTRSFCIGFVLTFFSAFDVPVFWPILLFYWLMLFTLTMRRQIMHMIKYRYVPFSLGKQRYDGK 519 + + R+ + + YQ LDKS P+ RWVV L + +Y +RVYL+QG+YI+TY LGIY LNL + FLSP++DP + DGP+LPT+ ++EFRPF+RRLPEFKFW+ T+ + V TFF AF+VPVFWPIL+ Y++MLF +TM+RQI HMIKYRY+PF+ GK+RY GK Sbjct: 16 SVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRYRGK 187
BLAST of FC918054 vs. ExPASy Swiss-Prot
Match: RER1_CHICK (Protein RER1 OS=Gallus gallus GN=RER1 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 7.402e-54 Identity = 95/172 (55.23%), Postives = 128/172 (74.42%), Query Frame = 1 Query: 16 AAISRWKYNVSRRYQHLLDKSVPHVLHRWVVCLAVVSIYAVRVYLVQGFYIITYGLGIYLLNLLMGFLSPQIDP----EYSDGPTLPTRGSDEFRPFVRRLPEFKFWYCVTRSFCIGFVLTFFSAFDVPVFWPILLFYWLMLFTLTMRRQIMHMIKYRYVPFSLGKQRYDGK 519 + + R+ + + YQ LDKS P+ RW+V L + IY +RVYL+QG+YI+TY LGIY LNL + FLSP++DP + DGP+LPTR ++EFRPF+RRLPEFKFW+ T+ + TFF AF+VPVFWPIL+ Y++MLF +TM+RQI HMIKYRY+PF+ GK++Y GK Sbjct: 16 SVVYRFFTRLGQIYQSWLDKSTPYTAVRWIVTLGLSFIYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTRQNEEFRPFIRRLPEFKFWHSATKGILVAMACTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRKYKGK 187
BLAST of FC918054 vs. ExPASy Swiss-Prot
Match: RER1_CAEEL (Protein RER1 homolog OS=Caenorhabditis elegans GN=rer-1 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 5.490e-49 Identity = 89/170 (52.35%), Postives = 121/170 (71.18%), Query Frame = 1 Query: 25 SRWKYNVSRRYQHLLDKSVPHVLHRWVVCLAVVSIYAVRVYLVQGFYIITYGLGIYLLNLLMGFLSPQIDP-----EYSDGPTLPTRGSDEFRPFVRRLPEFKFWYCVTRSFCIGFVLTFFSAFDVPVFWPILLFYWLMLFTLTMRRQIMHMIKYRYVPFSLGKQRYDGK 519 SR+ +++ +YQ+ LD+ PH RWV+ L + +A R+ L+QGFYI+ Y +GIY LNL + FL+P IDP + DGP LP++ +DEFRPF+RRLPEFKFW+ ++ I TFF FDVPVFWPIL+ Y+ +L LT++RQIMHMIKYRY+PF++GK R GK Sbjct: 13 SRFFHSLEVKYQYYLDRLTPHTAFRWVIALISLVFFASRIILLQGFYIVAYAVGIYYLNLFLLFLTPSIDPALEFEDEDDGPVLPSKTNDEFRPFMRRLPEFKFWHSFMKATLIAITCTFFEFFDVPVFWPILVMYFFILTFLTLKRQIMHMIKYRYIPFTVGKPRMAGK 182 The following BLAST results are available for this feature:
BLAST of FC918054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC918054 ID=FC918054; Name=FC918054; organism=Citrus clementina; type=EST; length=925bpback to top |