FC918058

Overview
NameFC918058
Unique NameFC918058
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length787
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918058 vs. ExPASy Swiss-Prot
Match: ITPK2_ARATH (Inositol-tetrakisphosphate 1-kinase 2 OS=Arabidopsis thaliana GN=ITPK2 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 7.008e-36
Identity = 71/101 (70.30%), Postives = 85/101 (84.16%), Query Frame = 3
Query:  477 RNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCEIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVITKDSLSIPDQV 779
            RNKGI FVAIDQN+PLS+QGPFD+VLHK  G EW  I+E++R  HP+VT+LDPPDAI HL NRQSMLQ VAD+NLSD NG+V VP+Q+VI KD+ SIP+ V
Sbjct:   65 RNKGILFVAIDQNKPLSEQGPFDIVLHKQIGKEWRRILEEFRLAHPDVTVLDPPDAILHLRNRQSMLQCVADMNLSDSNGRVGVPKQLVIKKDASSIPEAV 165          
BLAST of FC918058 vs. ExPASy Swiss-Prot
Match: ITPK3_ARATH (Inositol-tetrakisphosphate 1-kinase 3 OS=Arabidopsis thaliana GN=ITPK3 PE=2 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 1.195e-35
Identity = 71/103 (68.93%), Postives = 85/103 (82.52%), Query Frame = 3
Query:  477 RNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCEIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVITKDSLSIPDQVFE 785
            R KGI FVAID NRPLS+QGPFDVVLHKL G EW E+IEDY+QKHPEVT+LDPP +I+ ++NRQSMLQ +ADL LSDC+G + VP+QMV+ KDS +  D V E
Sbjct:  105 RRKGIFFVAIDLNRPLSEQGPFDVVLHKLLGKEWEEVIEDYQQKHPEVTVLDPPGSIQRIYNRQSMLQGMADLKLSDCSGSLFVPKQMVVLKDSAASADAVVE 207          
BLAST of FC918058 vs. ExPASy Swiss-Prot
Match: ITPK1_MAIZE (Inositol-tetrakisphosphate 1-kinase 1 OS=Zea mays GN=ITPK1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.519e-14
Identity = 38/96 (39.58%), Postives = 63/96 (65.62%), Query Frame = 3
Query:  462 IFAWCRNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCEIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADL-NLSDCNGKVRVPRQMVI 746
            + A   ++G+  V +D ++PL++QGPF +++HKL G +W   +  +  +HP V I+DPP AI  LHNR SMLQ V++L + +D +    +P Q+V+
Sbjct:   38 LVAQAASRGMDLVPVDASQPLAEQGPFHLLIHKLYGDDWRAQLVAFAARHPAVPIVDPPHAIDRLHNRISMLQVVSELDHAADQDSTFGIPSQVVV 133          
BLAST of FC918058 vs. ExPASy Swiss-Prot
Match: ITPK1_ARATH (Inositol-tetrakisphosphate 1-kinase 1 OS=Arabidopsis thaliana GN=ITPK1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.168e-12
Identity = 37/97 (38.14%), Postives = 60/97 (61.86%), Query Frame = 3
Query:  477 RNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCEIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLN--LSDCNGKVRVPRQMVITKDSL 761
            R +GI  V +D  + L +QG  D ++HKL  + W E + ++R+K P V ++D P+AI+ LHNR SML+ +  L   +SD + +  VP Q+V+   S+
Sbjct:   33 RQRGIDLVKLDPTKSLLEQGKLDCIIHKLYDVYWKENLHEFREKCPGVPVIDLPEAIERLHNRVSMLEVITQLRFPVSD-SERFGVPEQVVVMDSSV 128          
The following BLAST results are available for this feature:
BLAST of FC918058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ITPK2_ARATH7.008e-3670.30Inositol-tetrakisphosphate 1-kinase 2 OS=Arabidops... [more]
ITPK3_ARATH1.195e-3568.93Inositol-tetrakisphosphate 1-kinase 3 OS=Arabidops... [more]
ITPK1_MAIZE1.519e-1439.58Inositol-tetrakisphosphate 1-kinase 1 OS=Zea mays ... [more]
ITPK1_ARATH3.168e-1238.14Inositol-tetrakisphosphate 1-kinase 1 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ12YD16RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ12YD16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918058 ID=FC918058; Name=FC918058; organism=Citrus clementina; type=EST; length=787bp
TCCATTAATGTATACCATGTGTTTGAATGATGGTGAGACCTAAACTGGTG
CAAATCATAGTCACATGATATAAATTTTGACCTTGTACTATGTAGCGTTA
TAACGTTCAATCATGGCGACGGAGGTGATGGATCTTCCTCGAAGAACTTG
ACATGTTTAAACGTTGCATTAAAGTTCTTTAAGATTTTCTTGATTTACAT
AAGACAAAGGATTTTAGTTAACTAGTTTTATGCTTTTAACTTTGGAGCAG
TAATTACTAGGAAGTCTTTTCTGCTGTTTTGTTGATAAACATTTTCTTGC
ACTTGGTTTTTACTACGTTCTTTTGAGTTTTGAGAAAGAGAAAAAATTTA
GTGAGTTGTTTATTCTGAGTGTGAAGTTAGATAAAGTTAATTACTTTGAT
TGATTAACTTCACAGAATGTTGCCTATTAATTTAGACAGCCAATAACAAT
CAATGATTTATATTTTTGCTTGGTGCAGAAATAAGGGAATAAGTTTTGTT
GCCATTGATCAGAACAGGCCACTGTCAGATCAAGGGCCTTTTGATGTTGT
CTTGCACAAGTTGTCAGGAATGGAGTGGTGCGAGATCATTGAGGATTACA
GGCAGAAACATCCAGAAGTTACCATCCTTGATCCACCAGATGCAATTAAA
CATCTACACAATCGACAGTCCATGCTTCAGGATGTGGCAGATCTTAACTT
GTCTGACTGCAATGGCAAGGTTCGTGTTCCTAGGCAAATGGTCATAACCA
AAGATTCATTATCAATCCCTGATCAAGTTTTTGAAGC
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