FC918060
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918060 vs. ExPASy Swiss-Prot
Match: TCP9_ARATH (Transcription factor TCP9 OS=Arabidopsis thaliana GN=TCP9 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.920e-37 Identity = 75/85 (88.24%), Postives = 82/85 (96.47%), Query Frame = 3 Query: 438 KRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVNGTLKIPTTTTSN 692 KR+STKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGET+RWLLE+AE AII ATGTGTVPAIA+SVNGTLKIPTTT ++ Sbjct: 71 KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAEPAIIAATGTGTVPAIAMSVNGTLKIPTTTNAD 155
BLAST of FC918060 vs. ExPASy Swiss-Prot
Match: TCP19_ARATH (Transcription factor TCP19 OS=Arabidopsis thaliana GN=TCP19 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.855e-35 Identity = 71/82 (86.59%), Postives = 78/82 (95.12%), Query Frame = 3 Query: 438 KRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVNGTLKIPTTT 683 KR ++KDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGET+RWLLE AE AIIEATGTGTVPAIAVSVNGTLKIPT++ Sbjct: 53 KRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVSVNGTLKIPTSS 134
BLAST of FC918060 vs. ExPASy Swiss-Prot
Match: PCF2_ORYSJ (Transcription factor PCF2 OS=Oryza sativa subsp. japonica GN=PCF2 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.615e-30 Identity = 62/80 (77.50%), Postives = 73/80 (91.25%), Query Frame = 3 Query: 453 KDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVNGTLKIPTTTTSN 692 +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGET+RWLL+ +E AII ATGTGTVPAIA +V+G L+IPT ++S+ Sbjct: 76 RDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIAATGTGTVPAIATTVDGVLRIPTQSSSS 155
BLAST of FC918060 vs. ExPASy Swiss-Prot
Match: PCF2_ORYSI (Transcription factor PCF2 OS=Oryza sativa subsp. indica GN=PCF2 PE=4 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.615e-30 Identity = 62/80 (77.50%), Postives = 73/80 (91.25%), Query Frame = 3 Query: 453 KDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVNGTLKIPTTTTSN 692 +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGET+RWLL+ +E AII ATGTGTVPAIA +V+G L+IPT ++S+ Sbjct: 76 RDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSEPAIIAATGTGTVPAIATTVDGVLRIPTQSSSS 155
BLAST of FC918060 vs. ExPASy Swiss-Prot
Match: TCP15_ARATH (Transcription factor TCP15 OS=Arabidopsis thaliana GN=TCP15 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.435e-28 Identity = 60/87 (68.97%), Postives = 72/87 (82.76%), Query Frame = 3 Query: 438 KRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVNGTLKIPTTTTSNVH 698 KR+STKDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGET+ WLL+ AE A+I ATGTGT+PA S+N +L+ ++ S H Sbjct: 48 KRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSRSSLSAAH 134
BLAST of FC918060 vs. ExPASy Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.586e-27 Identity = 61/101 (60.40%), Postives = 76/101 (75.25%), Query Frame = 3 Query: 438 KRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVNGTLKIPTTTTSNVHH---------PNNV 713 KR+STKDRHTKV+GRGRRIR+PA CAAR+FQLTRELGHKSDGET+ WLL+ AE ++I ATGTGT+PA S+N +L+ ++ S H PNN+ Sbjct: 113 KRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPSHFRSAASTFSPNNI 213
BLAST of FC918060 vs. ExPASy Swiss-Prot
Match: TCP20_ARATH (Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.873e-27 Identity = 61/92 (66.30%), Postives = 71/92 (77.17%), Query Frame = 3 Query: 423 NNNNNKRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVNGTLKIPTTTTSNVH 698 N KRSS KDRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGET++WLL+ AE +II ATG+GT+PA A++ + TSN H Sbjct: 69 NQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALA-------SSAATSNHH 153
BLAST of FC918060 vs. ExPASy Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.137e-25 Identity = 55/83 (66.27%), Postives = 69/83 (83.13%), Query Frame = 3 Query: 441 RSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVNGTLKIPTTTTS 689 + STKDRHTKV+GRGRRIR+PA CAAR+FQLTRELGHKSDGET+ WLL+ AE AI+ ATGTGT+PA +++ +L+ +T S Sbjct: 57 KRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTIPANFSTLSVSLRSSGSTLS 139
BLAST of FC918060 vs. ExPASy Swiss-Prot
Match: TCP22_ARATH (Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.939e-25 Identity = 53/76 (69.74%), Postives = 65/76 (85.53%), Query Frame = 3 Query: 441 RSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVNGTLK 668 + TKDRHTKV+GRGRRIR+PA CAAR+FQLTRELGHKSDGET+ WLL+ AE AII +TGTGT+PA ++N +L+ Sbjct: 60 KKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLR 135
BLAST of FC918060 vs. ExPASy Swiss-Prot
Match: PCF3_ORYSJ (Transcription factor PCF3 OS=Oryza sativa subsp. japonica GN=PCF3 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.369e-25 Identity = 54/81 (66.67%), Postives = 67/81 (82.72%), Query Frame = 3 Query: 450 TKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVNGTLKIPTTTTSN 692 TKDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHK+DGET+ WLL+ AE AI+ ATGTGT+PA S+ +L+ + +S+ Sbjct: 152 TKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAIVAATGTGTIPANFSSLAVSLRSAASHSSS 232 The following BLAST results are available for this feature:
BLAST of FC918060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC918060 ID=FC918060; Name=FC918060; organism=Citrus clementina; type=EST; length=791bpback to top |