FC918117

Overview
NameFC918117
Unique NameFC918117
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918117 vs. ExPASy Swiss-Prot
Match: AATM_PONAB (Aspartate aminotransferase, mitochondrial OS=Pongo abelii GN=GOT2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.446e-37
Identity = 82/181 (45.30%), Postives = 106/181 (58.56%), Query Frame = -1
Query:  177 GFASGDIDKDAFPFRHFIKEGPNISFCQSFAKNMXXXXXXXXXXXXFCADADGKKGVDSQIKILVRPFFSNPPVPGARVASPLFNDPGFNNQGVGGVKGLGDRFFPLRVFFKGNLGKFGRKPDWGPLPSQIGMFASPGFKPEQMDPLAKGPRVFAPKGGGISVAGFPSPNVKGFAGSFSKV 719
            GFASGD DKDA+  RHFI++G N+  CQS+AKNM             C DAD  K V+SQ+KIL+RP +SNPP+ GAR+A+ + N P    Q +  VKG+ DR   +R     NL K G   +W  +  QIGMF   G KPEQ++ L K   ++  K G ISVAG  S NV   A +  +V
Sbjct:  248 GFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTMVCKDADEAKRVESQLKILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKGMADRIIGMRTQLVSNLKKEGSTHNWQHITDQIGMFCFTGLKPEQVERLIKEFSIYMTKDGRISVAGVTSSNVGYLAHAIHQV 428          
BLAST of FC918117 vs. ExPASy Swiss-Prot
Match: AATM_MACFA (Aspartate aminotransferase, mitochondrial OS=Macaca fascicularis GN=GOT2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.446e-37
Identity = 82/181 (45.30%), Postives = 106/181 (58.56%), Query Frame = -1
Query:  177 GFASGDIDKDAFPFRHFIKEGPNISFCQSFAKNMXXXXXXXXXXXXFCADADGKKGVDSQIKILVRPFFSNPPVPGARVASPLFNDPGFNNQGVGGVKGLGDRFFPLRVFFKGNLGKFGRKPDWGPLPSQIGMFASPGFKPEQMDPLAKGPRVFAPKGGGISVAGFPSPNVKGFAGSFSKV 719
            GFASGD DKDA+  RHFI++G N+  CQS+AKNM             C DAD  K V+SQ+KIL+RP +SNPP+ GAR+A+ + N P    Q +  VKG+ DR   +R     NL K G   +W  +  QIGMF   G KPEQ++ L K   ++  K G ISVAG  S NV   A +  +V
Sbjct:  248 GFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTMVCKDADEAKRVESQLKILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKGMADRIIGMRTQLVSNLKKEGSTHNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVTSGNVGYLAHAIHQV 428          
BLAST of FC918117 vs. ExPASy Swiss-Prot
Match: AATM_HUMAN (Aspartate aminotransferase, mitochondrial OS=Homo sapiens GN=GOT2 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.446e-37
Identity = 82/181 (45.30%), Postives = 106/181 (58.56%), Query Frame = -1
Query:  177 GFASGDIDKDAFPFRHFIKEGPNISFCQSFAKNMXXXXXXXXXXXXFCADADGKKGVDSQIKILVRPFFSNPPVPGARVASPLFNDPGFNNQGVGGVKGLGDRFFPLRVFFKGNLGKFGRKPDWGPLPSQIGMFASPGFKPEQMDPLAKGPRVFAPKGGGISVAGFPSPNVKGFAGSFSKV 719
            GFASGD DKDA+  RHFI++G N+  CQS+AKNM             C DAD  K V+SQ+KIL+RP +SNPP+ GAR+A+ + N P    Q +  VKG+ DR   +R     NL K G   +W  +  QIGMF   G KPEQ++ L K   ++  K G ISVAG  S NV   A +  +V
Sbjct:  248 GFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTMVCKDADEAKRVESQLKILIRPMYSNPPLNGARIAAAILNTPDLRKQWLQEVKGMADRIIGMRTQLVSNLKKEGSTHNWQHITDQIGMFCFTGLKPEQVERLIKEFSIYMTKDGRISVAGVTSSNVGYLAHAIHQV 428          
BLAST of FC918117 vs. ExPASy Swiss-Prot
Match: AATM_RAT (Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus GN=Got2 PE=1 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.214e-36
Identity = 81/181 (44.75%), Postives = 105/181 (58.01%), Query Frame = -1
Query:  177 GFASGDIDKDAFPFRHFIKEGPNISFCQSFAKNMXXXXXXXXXXXXFCADADGKKGVDSQIKILVRPFFSNPPVPGARVASPLFNDPGFNNQGVGGVKGLGDRFFPLRVFFKGNLGKFGRKPDWGPLPSQIGMFASPGFKPEQMDPLAKGPRVFAPKGGGISVAGFPSPNVKGFAGSFSKV 719
            GFASGD DKDA+  RHFI++G N+  CQS+AKNM             C DA+  K V+SQ+KIL+RP +SNPP+ GAR+A+ +   P    Q +  VKG+ DR   +R     NL K G   +W  +  QIGMF   G KPEQ++ L K   V+  K G ISVAG  S NV   A +  +V
Sbjct:  248 GFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTVVCKDAEEAKRVESQLKILIRPLYSNPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSVYMTKDGRISVAGVTSGNVGYLAHAIHQV 428          
BLAST of FC918117 vs. ExPASy Swiss-Prot
Match: AATM_MOUSE (Aspartate aminotransferase, mitochondrial OS=Mus musculus GN=Got2 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.214e-36
Identity = 81/181 (44.75%), Postives = 105/181 (58.01%), Query Frame = -1
Query:  177 GFASGDIDKDAFPFRHFIKEGPNISFCQSFAKNMXXXXXXXXXXXXFCADADGKKGVDSQIKILVRPFFSNPPVPGARVASPLFNDPGFNNQGVGGVKGLGDRFFPLRVFFKGNLGKFGRKPDWGPLPSQIGMFASPGFKPEQMDPLAKGPRVFAPKGGGISVAGFPSPNVKGFAGSFSKV 719
            GFASGD DKDA+  RHFI++G N+  CQS+AKNM             C DA+  K V+SQ+KIL+RP +SNPP+ GAR+A+ +   P    Q +  VKG+ DR   +R     NL K G   +W  +  QIGMF   G KPEQ++ L K   V+  K G ISVAG  S NV   A +  +V
Sbjct:  248 GFASGDGDKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTVVCKDAEEAKRVESQLKILIRPLYSNPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSVYMTKDGRISVAGVTSGNVGYLAHAIHQV 428          
BLAST of FC918117 vs. ExPASy Swiss-Prot
Match: AATM_PIG (Aspartate aminotransferase, mitochondrial OS=Sus scrofa GN=GOT2 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.586e-36
Identity = 81/181 (44.75%), Postives = 105/181 (58.01%), Query Frame = -1
Query:  177 GFASGDIDKDAFPFRHFIKEGPNISFCQSFAKNMXXXXXXXXXXXXFCADADGKKGVDSQIKILVRPFFSNPPVPGARVASPLFNDPGFNNQGVGGVKGLGDRFFPLRVFFKGNLGKFGRKPDWGPLPSQIGMFASPGFKPEQMDPLAKGPRVFAPKGGGISVAGFPSPNVKGFAGSFSKV 719
            GFASGD +KDA+  RHFI++G N+  CQS+AKNM             C DA+  K V+SQ+KIL+RP +SNPPV GAR+AS +   P    Q +  VKG+ DR   +R     NL K G   +W  +  QIGMF   G KPEQ++ L K   ++  K G ISVAG  S NV   A +  +V
Sbjct:  248 GFASGDGNKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTVVCKDAEEAKRVESQLKILIRPMYSNPPVNGARIASTILTSPDLRQQWLQEVKGMADRIISMRTQLVSNLKKEGSSHNWQHIVDQIGMFCFTGIKPEQVERLTKEFSIYMTKDGRISVAGVTSGNVGYLAHAIHQV 428          
BLAST of FC918117 vs. ExPASy Swiss-Prot
Match: AATM_BOVIN (Aspartate aminotransferase, mitochondrial OS=Bos taurus GN=GOT2 PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.071e-36
Identity = 80/181 (44.20%), Postives = 105/181 (58.01%), Query Frame = -1
Query:  177 GFASGDIDKDAFPFRHFIKEGPNISFCQSFAKNMXXXXXXXXXXXXFCADADGKKGVDSQIKILVRPFFSNPPVPGARVASPLFNDPGFNNQGVGGVKGLGDRFFPLRVFFKGNLGKFGRKPDWGPLPSQIGMFASPGFKPEQMDPLAKGPRVFAPKGGGISVAGFPSPNVKGFAGSFSKV 719
            GFASGD +KDA+  RHFI++G N+  CQS+AKNM             C DA+  K V+SQ+KIL+RP +SNPP+ GAR+AS +   P    Q +  VKG+ DR   +R     NL K G   +W  +  QIGMF   G KPEQ++ L K   ++  K G ISVAG  S NV   A +  +V
Sbjct:  248 GFASGDGNKDAWAVRHFIEQGINVCLCQSYAKNMGLYGERVGAFTVVCKDAEEAKRVESQLKILIRPMYSNPPINGARIASTILTSPDLRKQWLHEVKGMADRIISMRTQLVSNLKKEGSSHNWQHIIDQIGMFCYTGLKPEQVERLTKEFSIYMTKDGRISVAGVTSGNVAYLAHAIHQV 428          
BLAST of FC918117 vs. ExPASy Swiss-Prot
Match: AATM_HORSE (Aspartate aminotransferase, mitochondrial OS=Equus caballus GN=GOT2 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.025e-36
Identity = 80/181 (44.20%), Postives = 104/181 (57.46%), Query Frame = -1
Query:  177 GFASGDIDKDAFPFRHFIKEGPNISFCQSFAKNMXXXXXXXXXXXXFCADADGKKGVDSQIKILVRPFFSNPPVPGARVASPLFNDPGFNNQGVGGVKGLGDRFFPLRVFFKGNLGKFGRKPDWGPLPSQIGMFASPGFKPEQMDPLAKGPRVFAPKGGGISVAGFPSPNVKGFAGSFSKV 719
            GFASGD +KDA+  R+FI++G N+  CQS+AKNM             C DAD  K V+SQ+KIL+RP +SNPP+ GAR+AS +   P    Q +  VKG+ DR   +R     NL K G    W  +  QIGMF   G KPEQ++ L K   ++  K G ISVAG  S NV   A +  +V
Sbjct:  219 GFASGDGNKDAWAVRYFIEQGINVCLCQSYAKNMGLYGERVGAFTMVCKDADEAKRVESQLKILIRPLYSNPPLNGARIASTILTSPDLRKQWLQEVKGMADRIISMRTQLVSNLKKEGSSHSWQHIADQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVTSGNVGYLAHAIHQV 399          
BLAST of FC918117 vs. ExPASy Swiss-Prot
Match: AATM_CHICK (Aspartate aminotransferase, mitochondrial OS=Gallus gallus GN=GOT2 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35
Identity = 78/181 (43.09%), Postives = 106/181 (58.56%), Query Frame = -1
Query:  177 GFASGDIDKDAFPFRHFIKEGPNISFCQSFAKNMXXXXXXXXXXXXFCADADGKKGVDSQIKILVRPFFSNPPVPGARVASPLFNDPGFNNQGVGGVKGLGDRFFPLRVFFKGNLGKFGRKPDWGPLPSQIGMFASPGFKPEQMDPLAKGPRVFAPKGGGISVAGFPSPNVKGFAGSFSKV 719
            GFASGDI++DA+  RHFI++G ++   QS+AKNM             C DA+  K V+SQ+KIL+RP +SNPP+ GAR+AS + N P    + +  VKG+ DR   +R     NL K G   +W  +  QIGMF   G KPEQ++ L K   ++  K G ISVAG  S NV   A +  +V
Sbjct:  241 GFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIHQV 421          
BLAST of FC918117 vs. ExPASy Swiss-Prot
Match: AATM_XENTR (Aspartate aminotransferase, mitochondrial OS=Xenopus tropicalis GN=got2 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.064e-32
Identity = 72/170 (42.35%), Postives = 100/170 (58.82%), Query Frame = -1
Query:  210 GFASGDIDKDAFPFRHFIKEGPNISFCQSFAKNMXXXXXXXXXXXXFCADADGKKGVDSQIKILVRPFFSNPPVPGARVASPLFNDPGFNNQGVGGVKGLGDRFFPLRVFFKGNLGKFGRKPDWGPLPSQIGMFASPGFKPEQMDPLAKGPRVFAPKGGGISVAGFPSPN 719
            GFASGD ++DA+  RHFI+EG N+   QS+AKNM             C+DA+  K V+SQ+KIL+RP +SNPP+ GAR+A+ +   P    + +  VKG+ +R   +R     NL K G   +W  +  QIGMF   G +PEQ++ L K   ++  K G ISVAG  S N
Sbjct:  245 GFASGDTNRDAWAVRHFIQEGINVVLSQSYAKNMGLYGERVGAFTVVCSDAEEAKRVESQLKILIRPMYSNPPLNGARIAAAILTQPDLRKEWLQEVKGMANRIISMREQLVSNLKKEGSIHNWQHISDQIGMFCFTGLRPEQVERLIKEFSIYMTKDGRISVAGVTSAN 414          
The following BLAST results are available for this feature:
BLAST of FC918117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
AATM_PONAB2.446e-3745.30Aspartate aminotransferase, mitochondrial OS=Pongo... [more]
AATM_MACFA2.446e-3745.30Aspartate aminotransferase, mitochondrial OS=Macac... [more]
AATM_HUMAN2.446e-3745.30Aspartate aminotransferase, mitochondrial OS=Homo ... [more]
AATM_RAT1.214e-3644.75Aspartate aminotransferase, mitochondrial OS=Rattu... [more]
AATM_MOUSE1.214e-3644.75Aspartate aminotransferase, mitochondrial OS=Mus m... [more]
AATM_PIG1.586e-3644.75Aspartate aminotransferase, mitochondrial OS=Sus s... [more]
AATM_BOVIN2.071e-3644.20Aspartate aminotransferase, mitochondrial OS=Bos t... [more]
AATM_HORSE6.025e-3644.20Aspartate aminotransferase, mitochondrial OS=Equus... [more]
AATM_CHICK5.101e-3543.09Aspartate aminotransferase, mitochondrial OS=Gallu... [more]
AATM_XENTR1.064e-3242.35Aspartate aminotransferase, mitochondrial OS=Xenop... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA64AD10FM1 IVIA1 Citrus clementina cDNA clone IC0AAA64AD10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918117 ID=FC918117; Name=FC918117; organism=Citrus clementina; type=EST; length=719bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTAAAAAATCGGGATTGAGGCTTTTTGATTGGGACCCTTGTT
CCACAACCGGGTTGGCCAAATCCAAAATTACGGGCTTCCCCAAAAAACAA
AAAAATCAAACCCCACCCCAACCGGGGACCTTGGAAAAGGACCCGGCAAA
ACCCTTGACGTTGGGGGAAGGGAAACCGGCGACGGAAATTCCGCCGCCCT
TGGGAGCGAAAACACGGGGCCCCTTGGCCAAGGGGTCCATCTGTTCAGGC
TTAAAACCGGGGGAGGCAAACATGCCAATTTGGCTAGGGAGGGGGCCCCA
ATCGGGCTTGCGGCCAAACTTCCCAAGGTTCCCCTTGAAAAAAACACGCA
GGGGGAAGAAACGGTCACCCAAACCCTTGACCCCCCCCACCCCCTGGTTG
TTGAACCCGGGATCGTTAAAAAGGGGGGAGGCAACACGGGCCCCGGGAAC
GGGAGGGTTGGAAAAAAAAGGGCGGACCAAAATCTTGATCTGCGAGTCAA
CCCCCTTCTTCCCATCGGCGTCGGCACAAAAAAAGGAAAAGGCACCAACA
CCCCCCCCGAAAAAACCCATGTTCTTGGCAAAACTCTGGCAAAAGGAAAT
GTTGGGGCCCTCCTTGATAAAGTGGCGGAAGGGGAAAGCGTCCTTGTCAA
TGTCCCCACTGGCAAACCC
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