FC918118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918118 vs. ExPASy Swiss-Prot
Match: ACBP2_ARATH (Acyl-CoA-binding domain-containing protein 2 OS=Arabidopsis thaliana GN=ACBP2 PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.911e-48 Identity = 109/218 (50.00%), Postives = 133/218 (61.01%), Query Frame = 2 Query: 164 MSDWQPLLQSILIGLLFSYLVAKLISVVLSFKEDNLSITRSNNNNYNEPKRTKDDVVVAAPNPRGPEADSGRPHDTESMIAEQGSVRNEESLPCXXXXXXXXXXXXXXXSTELDE-MXXXXXXXXXXXXXXXXXXXXNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELYPTWAAGSSLKSKRGQEDAAS 814 M DW L QS+++GL+FSYL+AKLIS+V++FKEDNLS+TR + E K D + R + G + +S++AEQGS R++ STELDE +DVQ QLY LYKIATEGPC+APQPSALKMTARAKWQAWQKLGAMPPEEAM+KYI+IVT+LYPTW G RG +DAAS Sbjct: 1 MGDWAQLAQSVILGLIFSYLLAKLISIVVTFKEDNLSLTRHPEESQLEIKPEGVD------SRRLDSSCGGFGGEADSLVAEQGSSRSDS---VAGDDSEEDDDWEGVESTELDEAFSAATLFVTTAAADRLSQKVPSDVQQQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIEIVTQLYPTWLDGGVKAGSRGGDDAAS 209
BLAST of FC918118 vs. ExPASy Swiss-Prot
Match: ACBP1_ARATH (Acyl-CoA-binding domain-containing protein 1 OS=Arabidopsis thaliana GN=ACBP1 PE=1 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 8.911e-48 Identity = 108/216 (50.00%), Postives = 135/216 (62.50%), Query Frame = 2 Query: 164 MSDWQPLLQSILIGLLFSYLVAKLISVVLSFKEDNLSITRSNNNNYNEPKRTKDDVVVAAPNPRGPEADSGRPHDTESMIAEQGSVRNEESLPCXXXXXXXXXXXXXXXSTELDE-MXXXXXXXXXXXXXXXXXXXXNDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELYPTWAAGSSLKSKRGQEDA 808 M+DW L QSI+ GL+F+YL+AKLIS++L+FK++NLS+TR N+ +E + N R E +G +T+S+IAEQGS+R +E STELDE N++QLQLY LYKIATEGPC+APQPSALKMTARAKWQAWQKLGAMPPEEAM+KYID+VT+LYP W G S + R E A Sbjct: 1 MADWYQLAQSIIFGLIFAYLLAKLISILLAFKDENLSLTR-NHTTQSEYE-----------NLRKVETLTGISGETDSLIAEQGSLRGDED-------ESDDDDWEGVESTELDEAFSAATAFVAAAASDRLSQKVSNELQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIDLVTQLYPAWVEGGSKRRNRSGEAA 197
BLAST of FC918118 vs. ExPASy Swiss-Prot
Match: PECI_MOUSE (Peroxisomal 3,2-trans-enoyl-CoA isomerase OS=Mus musculus GN=Peci PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 4.464e-15 Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 572 NDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELYPTWAAGSSLKSKRGQEDAA 811 N+V+L+LYALYK ATEGPC+ P+P L +AKW AW LG++P E A Q Y+D+V+ L + A S + KRG ++ A Sbjct: 57 NEVKLRLYALYKQATEGPCNMPKPGMLDFVNKAKWDAWNALGSLPKETARQNYVDLVSSLSSSSEAPS--QGKRGADEKA 134
BLAST of FC918118 vs. ExPASy Swiss-Prot
Match: PECI_HUMAN (Peroxisomal 3,2-trans-enoyl-CoA isomerase OS=Homo sapiens GN=PECI PE=1 SV=4) HSP 1 Score: 81.2629 bits (199), Expect = 7.614e-15 Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 2 Query: 572 NDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELYPTWAAGSSLK 784 N+V+L+LYALYK ATEGPC+ P+P + +AKW AW LG++P E A Q Y+D+V+ L P+ + S ++ Sbjct: 59 NEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNYVDLVSSLSPSLESSSQVE 129
BLAST of FC918118 vs. ExPASy Swiss-Prot
Match: PECI_RAT (Peroxisomal 3,2-trans-enoyl-CoA isomerase OS=Rattus norvegicus GN=Peci PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.696e-14 Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 2 Query: 572 NDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELYPTWAAGSSLKSKRGQEDAASTDSK 826 N+V+L+LYALYK ATEGPC+ P+P +AKW AW LG++P E A Q Y+D+V+ L + A S K G D + +SK Sbjct: 57 NEVKLRLYALYKQATEGPCTMPKPGVFDFVNKAKWDAWNALGSLPKETARQNYVDLVSSLSSSSEASSQGK---GGADGKAQESK 138
BLAST of FC918118 vs. ExPASy Swiss-Prot
Match: ACBP3_ARATH (Acyl-CoA-binding domain-containing protein 3 OS=Arabidopsis thaliana GN=ACBP3 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.537e-12 Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 2 Query: 575 DVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELYP 757 + +++L+ L+KIATEG C QP A+ ++ARAKW AWQKLG M EEAM++Y+ +V++ P Sbjct: 254 EAKMELFGLHKIATEGSCREAQPMAVMISARAKWNAWQKLGNMSQEEAMEQYLALVSKEIP 314
BLAST of FC918118 vs. ExPASy Swiss-Prot
Match: ACBP4_ARATH (Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana GN=ACBP4 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.029e-11 Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 2 Query: 572 NDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELYPTWAAGSS 778 +D L LYALY+ AT GPC+ P+PSA + ++KW++WQ LG MP EAM+ ++ I+ E P W + +S Sbjct: 41 DDTALLLYALYQQATVGPCNTPKPSAWRPVEQSKWKSWQGLGTMPSIEAMRLFVKILEEDDPGWYSRAS 109
BLAST of FC918118 vs. ExPASy Swiss-Prot
Match: ACBP5_ARATH (Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana GN=ACBP5 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.292e-11 Identity = 31/64 (48.44%), Postives = 42/64 (65.62%), Query Frame = 2 Query: 572 NDVQLQLYALYKIATEGPCSAPQPSALKMTARAKWQAWQKLGAMPPEEAMQKYIDIVTELYPTW 763 ND L LY L++ AT GPCS P+PSA ++KW++WQ LG MP EAM+ ++ I+ E P W Sbjct: 42 NDTSLLLYTLHQQATLGPCSIPKPSAWNPVEQSKWKSWQGLGTMPSIEAMRLFVKILEEADPGW 105 The following BLAST results are available for this feature:
BLAST of FC918118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC918118 ID=FC918118; Name=FC918118; organism=Citrus clementina; type=EST; length=835bpback to top |