FC918122

Overview
NameFC918122
Unique NameFC918122
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length799
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATM_PONAB (Aspartate aminotransferase, mitochondrial OS=Pongo abelii GN=GOT2 PE=2 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 3.209e-84
Identity = 147/259 (56.76%), Postives = 191/259 (73.75%), Query Frame = 1
Query:   22 SRTALRASAQASKLRLQLQSSVRAASAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKKNLDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKTIYIPNPSWANHNAVFKDSGLKVEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            S  AL   A A    L   +S RA+S W+ V  GPPD ILG+TEAFK D++ +K+NLGVGAYRDD GKPYVLPSV++AE ++  KNLDKEY  I G+ +F KA+A LA G +S  LK GR V  Q+ISGTGALRIG +FL+RF+   + +++P PSW NH  +F+D+G++++ YRYY+  T G DF G VEDI  +P+ S++LLHACAHNPTGVDP  +QW+ ++ VVK+   + FFDMAYQGFASGD DKDA+ +RHF
Sbjct:    6 SGRALPGIAAAFHPGLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFAFFDMAYQGFASGDGDKDAWAVRHF 264          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATM_RAT (Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus GN=Got2 PE=1 SV=2)

HSP 1 Score: 310.457 bits (794), Expect = 7.148e-84
Identity = 145/259 (55.98%), Postives = 190/259 (73.36%), Query Frame = 1
Query:   22 SRTALRASAQASKLRLQLQSSVRAASAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKKNLDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKTIYIPNPSWANHNAVFKDSGLKVEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            S   L   A A    L   +S RA+S W+ V  GPPD ILG+TEAFK D++ +K+NLGVGAYRDD GKPYVLPSV++AE ++  KNLDKEY  I G+ DF KA+A LA G +S  LK GR V  Q+ISGTGALR+G +FL+RF+   + +++P PSW NH  +F+D+G++++ YRYY+  T G DF G +EDI  +P+ S++LLHACAHNPTGVDP  +QW+ ++ VVK+   + FFDMAYQGFASGD DKDA+ +RHF
Sbjct:    6 SGRVLSGMAAAFHPGLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAGKNLDKEYLPIGGLADFCKASAELALGENSEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEMAAVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHF 264          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATM_MACFA (Aspartate aminotransferase, mitochondrial OS=Macaca fascicularis GN=GOT2 PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 7.148e-84
Identity = 146/259 (56.37%), Postives = 190/259 (73.36%), Query Frame = 1
Query:   22 SRTALRASAQASKLRLQLQSSVRAASAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKKNLDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKTIYIPNPSWANHNAVFKDSGLKVEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            S   L   A A    L   +S RA+S W+ V  GPPD ILG+TEAFK D++ +K+NLGVGAYRDD GKPYVLPSV++AE ++  KNLDKEY  I G+ +F KA+A LA G +S  LK GR V  Q+ISGTGALRIG +FL+RF+   + +++P PSW NH  +F+D+G++++ YRYY+  T G DF G VEDI  +P+ S++LLHACAHNPTGVDP  +QW+ ++ VVK+   + FFDMAYQGFASGD DKDA+ +RHF
Sbjct:    6 SGRVLSGIAAAFHPGLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFAFFDMAYQGFASGDGDKDAWAVRHF 264          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATM_BOVIN (Aspartate aminotransferase, mitochondrial OS=Bos taurus GN=GOT2 PE=1 SV=2)

HSP 1 Score: 309.301 bits (791), Expect = 1.592e-83
Identity = 139/244 (56.97%), Postives = 186/244 (76.23%), Query Frame = 1
Query:   67 LQLQSSVRAASAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKKNLDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKTIYIPNPSWANHNAVFKDSGLKVEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            L   +S RA+S W+ V  GPPD ILG+TEAFK D++ +K+NLGVGAYRDD GKPYVLPSV++AE ++  KNLDKEY  I G+ +F KA+A LA G ++  LK GR V  Q+ISGTGALRIG +FL+RF+   + +++P P+W NH  +F+D+G++++ YRYY+  T G DF G +EDI  +P  S++LLHACAHNPTGVDP  +QW+ ++ VVK+N  + FFDMAYQGFASGD +KDA+ +RHF
Sbjct:   21 LAAAASARASSWWAHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIAGLAEFCKASAELALGENNEVLKSGRYVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQSYRYYDPKTCGFDFTGAIEDISKIPAQSVILLHACAHNPTGVDPRPEQWKEMATVVKKNNLFAFFDMAYQGFASGDGNKDAWAVRHF 264          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATM_MOUSE (Aspartate aminotransferase, mitochondrial OS=Mus musculus GN=Got2 PE=1 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 2.080e-83
Identity = 143/259 (55.21%), Postives = 190/259 (73.36%), Query Frame = 1
Query:   22 SRTALRASAQASKLRLQLQSSVRAASAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKKNLDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKTIYIPNPSWANHNAVFKDSGLKVEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            S   L   A A    L   +S RA+S W+ V  GPPD ILG+TEAFK D++ +K+NLGVGAYRDD GKPYVLPSV++AE ++  KNLDKEY  I G+ +F KA+A LA G ++  LK GR V  Q+ISGTGALR+G +FL+RF+   + +++P PSW NH  +F+D+G++++ YRYY+  T G DF G +EDI  +P+ S++LLHACAHNPTGVDP  +QW+ ++ VVK+   + FFDMAYQGFASGD DKDA+ +RHF
Sbjct:    6 SSRILSGMAAAFHPGLAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENNEVLKSGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFSGALEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIASVVKKKNLFAFFDMAYQGFASGDGDKDAWAVRHF 264          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATM_HUMAN (Aspartate aminotransferase, mitochondrial OS=Homo sapiens GN=GOT2 PE=1 SV=2)

HSP 1 Score: 308.916 bits (790), Expect = 2.080e-83
Identity = 141/244 (57.79%), Postives = 186/244 (76.23%), Query Frame = 1
Query:   67 LQLQSSVRAASAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKKNLDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKTIYIPNPSWANHNAVFKDSGLKVEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            L   +S RA+S W+ V  GPPD ILG+TEAFK D++ +K+NLGVGAYRDD GKPYVLPSV++AE ++  KNLDKEY  I G+ +F KA+A LA G +S  LK GR V  Q+ISGTGALRIG +FL+RF+   + +++P P+W NH  +F+D+G++++ YRYY+  T G DF G VEDI  +P+ S++LLHACAHNPTGVDP  +QW+ ++ VVK+   + FFDMAYQGFASGD DKDA+ +RHF
Sbjct:   21 LAAAASARASSWWTHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEVLKSGRFVTVQTISGTGALRIGASFLQRFFKFSRDVFLPKPTWGNHTPIFRDAGMQLQGYRYYDPKTCGFDFTGAVEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIATVVKKRNLFAFFDMAYQGFASGDGDKDAWAVRHF 264          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATM_PIG (Aspartate aminotransferase, mitochondrial OS=Sus scrofa GN=GOT2 PE=1 SV=2)

HSP 1 Score: 306.605 bits (784), Expect = 1.032e-82
Identity = 143/259 (55.21%), Postives = 188/259 (72.59%), Query Frame = 1
Query:   22 SRTALRASAQASKLRLQLQSSVRAASAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKKNLDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKTIYIPNPSWANHNAVFKDSGLKVEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            S   L   A A    L   +S RA+S W+ V  GPPD ILG+TEAFK D++ +K+NLGVGAYRDD GKPYVLPSV++AE ++  KNLDKEY  I G+ +F KA+A LA G ++  LK GR V  Q+ISGTGALRIG  FL+RF+   + +++P PSW NH  +F+D+G+++  YRYY+  T G DF G +EDI  +P  S++LLHACAHNPTGVDP  +QW+ ++ +VK+N  + FFDMAYQGFASGD +KDA+ +RHF
Sbjct:    6 SGRVLSGVASAFHPGLAAAASARASSWWAHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENNEVLKSGRYVTVQTISGTGALRIGANFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGMQLHSYRYYDPKTCGFDFTGALEDISKIPAQSVILLHACAHNPTGVDPRPEQWKEMATLVKKNNLFAFFDMAYQGFASGDGNKDAWAVRHF 264          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATM_XENTR (Aspartate aminotransferase, mitochondrial OS=Xenopus tropicalis GN=got2 PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 5.664e-81
Identity = 134/237 (56.54%), Postives = 181/237 (76.37%), Query Frame = 1
Query:   88 RAASAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKKNLDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKTIYIPNPSWANHNAVFKDSGLKVEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            RA+S WS V  GPPD ILG+TEAFK D++ +K+NLGVGAYRDD GKPYVL SV++AE ++  KNLDKEY  I G+ +F +A+A LA G +   ++ GR +  Q+ISGTG+LR+G  FL+RFY   + +Y+P PSW NH  +F+D+GL+V+ YRYY+  T G DF G ++DI  +P+ SI+L HACAHNPTGVDP ++QW+ L+ ++K    +PFFDMAYQGFASGDT++DA+ +RHF
Sbjct:   25 RASSWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLSSVRKAEAQLASKNLDKEYLPIGGLAEFARASAQLALGENCDAIQSGRFITVQTISGTGSLRVGANFLQRFYKYSRDVYLPKPSWGNHTPIFRDAGLEVKGYRYYDPKTCGFDFTGALDDISKIPEQSIILFHACAHNPTGVDPKQEQWKELAALIKSRRLFPFFDMAYQGFASGDTNRDAWAVRHF 261          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATM_HORSE (Aspartate aminotransferase, mitochondrial OS=Equus caballus GN=GOT2 PE=1 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.671e-80
Identity = 136/235 (57.87%), Postives = 179/235 (76.17%), Query Frame = 1
Query:   94 ASAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKKNLDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKTIYIPNPSWANHNAVFKDSGLKVEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            +S W+ V  GPPD ILG+TEA+K D++ +K+NLGVGAYRDD GKPYVLPSV++AE ++  KNLDKEY  I G+ +F KA+A LA G +S  LK GR V  QSISGTGALRIG  FL+RF+   + +++P PSW NH  +F+D+GL++  YRYY+  T G D  G +EDI  +P+ SI+LLHACAHNPTGVDP  +QW+ ++ +VK+N  + FFDMAYQGFASGD +KDA+ +R+F
Sbjct:    1 SSWWAHVEMGPPDPILGVTEAYKRDTNSKKMNLGVGAYRDDNGKPYVLPSVRKAEAQIAAKNLDKEYLPIGGLAEFCKASAELALGENSEALKSGRYVTVQSISGTGALRIGANFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGLQLHAYRYYDPKTCGFDVTGALEDISKIPQQSIILLHACAHNPTGVDPRPEQWKEIATLVKKNNLFAFFDMAYQGFASGDGNKDAWAVRYF 235          
BLAST of FC918122 vs. ExPASy Swiss-Prot
Match: AATM_CHICK (Aspartate aminotransferase, mitochondrial OS=Gallus gallus GN=GOT2 PE=1 SV=2)

HSP 1 Score: 295.049 bits (754), Expect = 3.108e-79
Identity = 134/240 (55.83%), Postives = 178/240 (74.17%), Query Frame = 1
Query:   79 SSVRAASAWSQVPQGPPDAILGITEAFKADSHPEKINLGVGAYRDDKGKPYVLPSVKEAEQRVVKKNLDKEYAGITGVPDFTKAAAVLAYGADSAPLKEGRVVITQSISGTGALRIGGAFLERFYPGDKTIYIPNPSWANHNAVFKDSGLKVEKYRYYNKDTIGLDFEGMVEDIKNMPKGSIVLLHACAHNPTGVDPTEDQWRALSDVVKENGHYPFFDMAYQGFASGDTDKDAFPIRHF 798
            ++ RA+S WS V  GPPD ILG+TEAFK D++ +K+NLGVGAYRDD GK YVL  V++AE  +  K +DKEY  I G+ DFT+A+A LA G +S   K GR V  Q ISGTG+LR+G  FL+RF+   + +Y+P PSW NH  +F+D+GL+++ YRYY+  T  LDF G +EDI  +P+ SI+LLHACAHNPTGVDP ++QW+ L+ VVK+     +FDMAYQGFASGD ++DA+ +RHF
Sbjct:   18 ATARASSWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKSYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHF 257          
The following BLAST results are available for this feature:
BLAST of FC918122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
AATM_PONAB3.209e-8456.76Aspartate aminotransferase, mitochondrial OS=Pongo... [more]
AATM_RAT7.148e-8455.98Aspartate aminotransferase, mitochondrial OS=Rattu... [more]
AATM_MACFA7.148e-8456.37Aspartate aminotransferase, mitochondrial OS=Macac... [more]
AATM_BOVIN1.592e-8356.97Aspartate aminotransferase, mitochondrial OS=Bos t... [more]
AATM_MOUSE2.080e-8355.21Aspartate aminotransferase, mitochondrial OS=Mus m... [more]
AATM_HUMAN2.080e-8357.79Aspartate aminotransferase, mitochondrial OS=Homo ... [more]
AATM_PIG1.032e-8255.21Aspartate aminotransferase, mitochondrial OS=Sus s... [more]
AATM_XENTR5.664e-8156.54Aspartate aminotransferase, mitochondrial OS=Xenop... [more]
AATM_HORSE3.671e-8057.87Aspartate aminotransferase, mitochondrial OS=Equus... [more]
AATM_CHICK3.108e-7955.83Aspartate aminotransferase, mitochondrial OS=Gallu... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA64AD10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA64AD10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918122 ID=FC918122; Name=FC918122; organism=Citrus clementina; type=EST; length=799bp
ATACCCAAGATGCTGTCAGGATCTAGAACTGCTTTGAGAGCATCCGCTCA
AGCTTCCAAGCTTCGTCTGCAGCTGCAGTCTAGCGTCAGAGCTGCCTCGG
CCTGGTCGCAAGTGCCCCAAGGACCTCCCGATGCCATCCTTGGTATCACC
GAGGCCTTCAAGGCCGACAGCCACCCCGAGAAGATCAACCTCGGTGTTGG
TGCATACCGCGACGACAAGGGCAAGCCCTACGTCCTGCCCTCCGTGAAGG
AGGCCGAGCAAAGAGTCGTCAAGAAGAACCTTGACAAGGAATACGCTGGC
ATTACCGGTGTGCCCGACTTCACCAAGGCCGCCGCTGTCCTCGCATACGG
TGCCGACTCAGCACCTCTCAAGGAGGGCAGAGTCGTCATCACCCAGTCAA
TCTCTGGTACTGGTGCCCTCAGAATCGGTGGTGCTTTCCTCGAGCGCTTC
TACCCTGGCGACAAGACCATCTACATTCCCAACCCCAGTTGGGCCAACCA
CAATGCCGTCTTCAAGGACTCAGGCCTCAAGGTCGAGAAGTACCGCTACT
ACAACAAGGACACCATCGGTCTCGACTTTGAGGGTATGGTTGAGGACATC
AAGAACATGCCCAAGGGCAGCATTGTCCTTCTCCACGCTTGCGCGCACAA
CCCCACTGGTGTCGACCCCACCGAGGACCAATGGCGCGCTCTGAGCGACG
TTGTCAAGGAAAACGGACACTACCCCTTCTTCGACATGGCCTACCAGGGC
TTTGCCAGTGGTGACACTGACAAGGACGCTTTCCCCATCCGCCACTTTA
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