FC918123
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 410.994 bits (1055), Expect = 4.066e-114 Identity = 198/272 (72.79%), Postives = 235/272 (86.40%), Query Frame = 1 Query: 4 VYVGHFLRRLERDTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMRPVAMASTVAPRMPMYXXXXXXIEQQIFYGQGPPAMIPPQPAFGYQQQLVPGMRP 819 VYVG FLRR ERD+ +K+KFTNVYVKNL+ STT++DL+ +FGEYG I SAVVM+DG+GKSK FGFVNFEN+DDAARAVE+LNG KFDDKEWYVG+AQKKSERE EL+ ++EQN+KEAADKFQ +NLY+KNLD SI DEKLK +FSPFG +TS KVMRDP G S+GSGFVAF+TPEEA+ A+ +++G+M+ SKPLYVA+A RKEDRR RLQAQF+Q+RPVAM +V PRMP+Y I QQ+FYGQ PPAMIPPQP +GYQQQLVPGMRP Sbjct: 194 VYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRMPVYPPGGPGIGQQMFYGQAPPAMIPPQPGYGYQQQLVPGMRP 465 HSP 2 Score: 137.502 bits (345), Expect = 8.677e-32 Identity = 74/205 (36.10%), Postives = 113/205 (55.12%), Query Frame = 1 Query: 37 RDTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQ 651 RD + +S N+++KNL S + L +F +G I S V D G+SK +GFV + N + A +A+E LNG +DK+ YVG ++ ER+ A+K + TN+Y+KNL +S D+ LK+ F +G ITS VM+D G S+G GFV F ++A+ A+ +NG K YV A +K +R L+ ++ Q Sbjct: 114 RDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERD------------STANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQ 306 HSP 3 Score: 103.99 bits (258), Expect = 1.063e-21 Identity = 67/186 (36.02%), Postives = 101/186 (54.30%), Query Frame = 1 Query: 67 TNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRD-GDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDR 621 T++YV +L + T+ L +FG+ GT+ + V RD +S +G+VNF N DAARA++ LN Y+ K + H+ + A N++IKNLD+SID + L FS FGNI SCKV D G S+G GFV ++ E A A+ ++NG ++ K +YV R+++R Sbjct: 36 TSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELN---------YIPLYGKPI--RVMYSHRDPSVRRSGAG-----NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQER 205
BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.577e-76 Identity = 154/277 (55.60%), Postives = 193/277 (69.68%), Query Frame = 1 Query: 4 VYVGHFLRRLER--DTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMRPVAMASTV--APRMPMYXXXXXXIEQQIFYGQGPPAMIPPQP-AFGYQQQLVPGMRP 819 V+VGHF+RR ER D +FTNVYVKNL E++L+K+FG++G I+SAVVMRD G S+CFGFVNFE ++ AA AVE +NG D YVG+AQKKSERE EL+ +FEQ +K QG NLY+KNLDDS+DDEKLK +FS +GN+TS KVM +P+G+SRG GFVA+S PEEA AL EMNG+M+ KPLY+ALA RKEDRRA LQA F+Q+R S P PM Q ++ GQ +M+P QP +G+Q Q +PGMRP Sbjct: 206 VFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQIRAPGPMSGFHHPPGGPM-----PGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRP 477 HSP 2 Score: 123.635 bits (309), Expect = 1.297e-27 Identity = 76/207 (36.71%), Postives = 110/207 (53.14%), Query Frame = 1 Query: 37 RDTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMR 657 RD S N+++KNL S + L ++F +GTI S V D G+SK +GFV FE + A A++ LNG +DK+ +VG ++ ER + E + TN+Y+KNL I +++L+ F FG I+S VMRD G SR GFV F E A+ A+ +MNG + LYV A +K +R L+ +F Q R Sbjct: 126 RDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARD----------ENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQER 322 HSP 3 Score: 95.9005 bits (237), Expect = 2.895e-19 Identity = 61/185 (32.97%), Postives = 92/185 (49.73%), Query Frame = 1 Query: 67 TNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDR 621 +++Y +L TE L F + S V RD + +S + ++NF N +DA RA+EALN D+ + + + L K N++IKNLD SID++ L FS FG I SCKV D G S+G GFV F E A A+ ++NG ++ K ++V R+++R Sbjct: 49 SSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKG----------------NIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQER 217
BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2) HSP 1 Score: 269.626 bits (688), Expect = 1.463e-71 Identity = 143/280 (51.07%), Postives = 190/280 (67.86%), Query Frame = 1 Query: 4 VYVGHFLRRLERDTEISKS--KFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMRPVAMASTVAPRMPMY-----XXXXXXIEQQIFYGQGPPAMIPPQP-AFGYQQQLVPGMRP 819 V+VGHF+RR +R S + FTNVYVKNL T+++L+K+FG+YG I+SAVVM+D G S+ FGFVNF + + AA AVE +NG + YVG+AQKKS+RE EL+ +FEQ +K QG+NLY+KNLDDS++DEKLK +FS +GN+TSCKVM + +G+SRG GFVA+S PEEA +A+ EMNG+M+ KPLYVALA RKE+R+A LQ+ F Q+R S V M + +F G ++P QP +GYQ Q +PGMRP Sbjct: 202 VFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPGMRP 481 HSP 2 Score: 132.88 bits (333), Expect = 2.137e-30 Identity = 79/207 (38.16%), Postives = 115/207 (55.56%), Query Frame = 1 Query: 37 RDTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMR 657 RD S NV++KNL S + L ++F +GTI S V D G+SK +GFV FE + A A++ LNG +DK+ +VG ++ +R ++ A F TN+Y+KNL I D++LK F +G+I+S VM+D G SR GFV F +PE A++A+ +MNG + LYV A +K DR L+ +F Q R Sbjct: 122 RDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDR--------ARSESGAVPSF--TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQER 318 HSP 3 Score: 96.2857 bits (238), Expect = 2.217e-19 Identity = 62/185 (33.51%), Postives = 94/185 (50.81%), Query Frame = 1 Query: 67 TNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDR 621 +++YV +L S E L F + + + V RD +S + +VNF N +DA+RA+E+LN D+ + + + L K N++IKNLD SID++ L FS FG I SCKV D G S+G GFV F E A A+ ++NG ++ K ++V R++DR Sbjct: 45 SSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKG----------------NVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDR 213
BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP_USTMA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 8.897e-61 Identity = 126/288 (43.75%), Postives = 175/288 (60.76%), Query Frame = 1 Query: 4 VYVGHFLRRLERDTEISKSK--FTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMRPVAMASTVAPRMPMYXXXXXXIEQQIFYGQGPPAMIP--------------PQPAFGYQQQLVPGMRP 819 VYVGH + R ER +I +++ FTNVY KN+ T+++ +K F ++G I S V+ RD DGKSK FGFVNFE+ ++A +AV+ L+ F ++ +V +AQKKSERE EL+ +E E KFQG NLY+KN+ +S DDE+L+ F+PFG ITSCK+MR P G+SRG GFV +S PEEA+ A+ EMNG+M+ ++PLYVALA RK+ RR +L+AQ Q + + A + Y Q + P M+P P +G Q GM P Sbjct: 204 VYVGHHIPRKERQAKIEETRANFTNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALAQRKDVRRQQLEAQIMQRNQLRLQQQAAAQGMGYPGPGMYYPQPGAFPGQPGGMVPRPRYAPAGMMPQGMPMAPYGQPGQFPAGMMP 491 HSP 2 Score: 110.153 bits (274), Expect = 1.484e-23 Identity = 66/204 (32.35%), Postives = 110/204 (53.92%), Query Frame = 1 Query: 34 ERDTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQF 645 +RD + ++ N+++KNL + L +F +G I S V + G S +GFV++E ++ A A++ +NG +DK+ YVG + ER+ ++ +E F TN+Y KN+D + D++ + LF+ FG ITSC + RD G S+G GFV F EA A+ E++ + L+VA A +K +R L+ + Sbjct: 124 QRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKI--------EETRANF--TNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSY 316 HSP 3 Score: 91.6633 bits (226), Expect = 5.460e-18 Identity = 70/210 (33.33%), Postives = 106/210 (50.48%), Query Frame = 1 Query: 67 TNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDG-DGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMRPVAMASTVAPRM 693 T++YV L S TE L + F GT+AS V RD +S + +VNF N+ D RA+E LN ++ + S+R+ L+ + N ++IKNLD ID++ L F+ FGNI SCKV + G S G GFV + T E A A+ +NG ++ K +YV +++R+A+++ A V A V P + Sbjct: 47 TSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQLNYSLIRNRPCRI----MWSQRDPALRRTGQGN------------IFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEETRANFTNV-YAKNVDPEV 238
BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.285e-59 Identity = 123/218 (56.42%), Postives = 160/218 (73.39%), Query Frame = 1 Query: 4 VYVGHFLRRLERDTEI-SKSK-FTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQ 651 V+VG F R ER+ E+ +K+K FTNVY+KN +E L++ F ++G S VMRD +GKSK FGFV++E +DA +AVE +NGK+ K +VG+AQKK ER+ ELK +FEQ +E ++QG NLYIKNLDD+IDDEKL+ FSPFG+ITS KVM + G S+G GFV FS+PEEA+ A+ EMNGR+V SKPLYVALA RKE+R+A L Q+ Q Sbjct: 168 VFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED-GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQ 384 HSP 2 Score: 150.599 bits (379), Expect = 9.905e-36 Identity = 83/208 (39.90%), Postives = 126/208 (60.58%), Query Frame = 1 Query: 34 ERDTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMR 657 +RD + KS NV++KNL S + L +F +G I S V+ D +G SK + FV+FE + A +A+E +NG +D++ +VG+ + + ERE EL A + TN+YIKN + +DDE LK LFS FG S KVMRDP G S+G GFV++ E+A+ A+ EMNG+ + K ++V A +K +R+A L+ +F Q++ Sbjct: 88 QRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL----------GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 284 HSP 3 Score: 83.5741 bits (205), Expect = 1.487e-15 Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 1 Query: 4 VYVGHFLRRLERDTE------------ISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNM 348 ++VG +++ER E IS+ + N+Y+KNL + +E L+K F +G+I SA VM + DG+SK FGFV F + ++A +AV +NG+ K YV AQ+K ER+ L +Q+ Q + Sbjct: 261 IFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRV 386
BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PAP1L_HUMAN (Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.678e-59 Identity = 130/268 (48.51%), Postives = 173/268 (64.55%), Query Frame = 1 Query: 4 VYVGHFLRRLERDTEISKS--KFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQ----MRPVA---MASTVAPRMPMYXXXXXXIEQQIFYGQGPPAMIPPQPA 780 V+VGHF R ER+ E+ +FTN+YVKNL E+ LQ F ++G + S VMRD G S+CFGFVNFE ++A +AV +NGK+ + Y G+AQK+ ER+ ELK +FEQ ++ ++QG NLY+KNLDDSIDD+KL+ FSP+G ITS KVM + G S+G GFV FS+PEEA+ A+ EMNGR+V +KPLYVALA RKE+R+A L Q+ Q MR ++ + S P Q +YG GP + P QPA Sbjct: 168 VFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE-GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAMPQPPAQAAYYGCGP--VTPTQPA 432 HSP 2 Score: 134.42 bits (337), Expect = 7.346e-31 Identity = 79/208 (37.98%), Postives = 118/208 (56.73%), Query Frame = 1 Query: 34 ERDTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMR 657 +RD + KS N+++KNL S + L +F +G I S V D G S+ FGFV+FE + A +A+ +NG +D++ +VG + + ERE EL A + TN+Y+KNL +D++ L+ LFS FG + S KVMRD G SR GFV F EEA A++ MNG+ V + LY A ++ +R+ L+ +F QM+ Sbjct: 88 QRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL----------GARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMK 284 HSP 3 Score: 89.3521 bits (220), Expect = 2.710e-17 Identity = 66/192 (34.38%), Postives = 98/192 (51.04%), Query Frame = 1 Query: 70 NVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRD-GDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQ 642 ++YV +L TE L + F G I S V RD +S + ++NF+ DA RA++ +N + + + S+R+ L+ K N++IKNL+DSID++ L FS FGNI SCKV D G SRG GFV F T E A A+ MNG ++ + ++V + +R A L A+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRI----MWSQRDPGLR------------KSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELGAR 186
BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP_KLULA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Kluyveromyces lactis GN=PAB1 PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 4.882e-59 Identity = 129/268 (48.13%), Postives = 171/268 (63.81%), Query Frame = 1 Query: 4 VYVGHFLRRLERDTEISKSK--FTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFA-------QMRPVAMASTVAPRMPMYXXXXXXIEQQIFYGQGPPAMIP-PQP 777 VYV + + +R +++ ++K FTN+YVKN+ TT+E+ ++ F +YG I SA + +D +GK K FGFVNF + + AA+AVE LNGK+F + YVG+AQKK ER ELK Q+EQ E KFQG NL+IKNLDDSIDDEKLK F+P+G ITS +VMRD G S+G GFV FS+PEEA+ A+ E N ++V KPLYVA+A RK+ RR++L Q Q + A+ A MP Q+FYG P P P P Sbjct: 208 VYVAMHVPKKDRISKLEEAKANFTNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDEKLKEEFAPYGTITSARVMRDQEGNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARNQIRFQQQQQQQAAAAAAGMP------GQYMPQMFYGVMAPRGFPGPNP 469 HSP 2 Score: 124.79 bits (312), Expect = 5.820e-28 Identity = 75/208 (36.06%), Postives = 112/208 (53.85%), Query Frame = 1 Query: 34 ERDTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMR 657 ERD I K N+++KNL + + L ++F +G + S V D +G S+ FGFV+F+ DA A+EA+NG + E YV K +R +L +EA F TN+Y+KN+D DE+ + LFS +G I S + +D G +G GFV F A+ A+ E+NG+ S+ LYV A +K +R L+ Q+ Q R Sbjct: 127 ERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVLSCKVALDENGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKDRISKL--------EEAKANF--TNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYR 324 HSP 3 Score: 84.7297 bits (208), Expect = 6.675e-16 Identity = 62/201 (30.85%), Postives = 101/201 (50.25%), Query Frame = 1 Query: 43 TEISKSKFTN--VYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKC-FGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQ 636 + +SK + N +YV L + TE L F G I+S V RD K+ + +VN+ + + +A++ LN + + + + SER+ ++ K N++IKNL +ID++ L FS FG + SCKV D G SRG GFV F +A A+ +NG ++ +YVA+ K+DR ++L+ Sbjct: 40 SSVSKVENNNASLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAIQELNYAEINGRPCRI----MWSERDPAIR------------KKGSGNIFIKNLHPAIDNKALHETFSTFGEVLSCKVALDENGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKDRISKLE 224
BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 4.882e-59 Identity = 118/218 (54.13%), Postives = 156/218 (71.56%), Query Frame = 1 Query: 4 VYVGHFLRRLERDTEISK--SKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQ 651 V+VG F R ER+ E+ +FTNVY+KN +E L++ FG++G S VM D GKSK FGFV+FE +DA +AV+ +NGK+ + K+ YVG+AQKK ER+ ELK +FEQ ++ ++QG NLY+KNLDD IDDE+L+ FSPFG ITS KVM + G S+G GFV FS+PEEA+ A+ EMNGR+V +KPLYVALA RKE+R+A L Q+ Q Sbjct: 168 VFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQ 384 HSP 2 Score: 146.747 bits (369), Expect = 1.430e-34 Identity = 83/208 (39.90%), Postives = 123/208 (59.13%), Query Frame = 1 Query: 34 ERDTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMR 657 +RD + KS N+++KNL S + L +F +G I S V+ D +G SK +GFV+FE + A RA+E +NG +D++ +VG+ + + ERE EL A + TN+YIKN + +DDE+LK LF FG S KVM D G S+G GFV+F E+A A+ EMNG+ + K +YV A +K +R+ L+ +F QM+ Sbjct: 88 QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL----------GARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284 HSP 3 Score: 88.9669 bits (219), Expect = 3.539e-17 Identity = 53/128 (41.41%), Postives = 74/128 (57.81%), Query Frame = 1 Query: 4 VYVGHFLRRLERDTEISKSKF-------------TNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNM 348 +YVG +++ER TE+ K KF N+YVKNL +E L+K F +GTI SA VM +G G+SK FGFV F + ++A +AV +NG+ K YV AQ+K ER+ L +Q+ Q M Sbjct: 261 IYVGRAQKKVERQTEL-KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRM 386
BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABP_YEAST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4) HSP 1 Score: 227.639 bits (579), Expect = 6.376e-59 Identity = 126/263 (47.91%), Postives = 171/263 (65.02%), Query Frame = 1 Query: 4 VYVGHFLRRLERDTEISKSK--FTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFA---QMR---PVAMASTVAPRMPMYXXXXXXIEQQIFYGQGPPAMIP 768 +YV L R ERD+++ ++K +TN+YVKN++ TT+E Q+ F ++G I SA + +D DGK K FGFVN+E +DA +AVEALN + + ++ YVG+AQKK+ER LK Q+E E K+QG NL++KNLDDS+DDEKL+ F+P+G ITS KVMR G S+G GFV FSTPEEA+ A+ E N ++V KPLYVA+A RK+ RR++L Q QMR A A+ A MP +FYG PP +P Sbjct: 196 IYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARNQMRYQQATAAAAAAAAGMP------GQFMPPMFYGVMPPRGVP 452 HSP 2 Score: 117.857 bits (294), Expect = 7.115e-26 Identity = 71/213 (33.33%), Postives = 110/213 (51.64%), Query Frame = 1 Query: 34 ERDTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMRPVAMA 672 +RD + K N+++KNL + L +F +G I S+ + D +GKSK FGFV+FE A A++ALNG + +E YV + ER+ +L+ K TNLY+KN++ DE+ + LF+ FG I S + +D G +G GFV + E+A A+ +N + + LYV A +K +R L+ Q+ R MA Sbjct: 115 QRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEE----------TKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMA 317 HSP 3 Score: 77.0258 bits (188), Expect = 1.392e-13 Identity = 56/200 (28.00%), Postives = 99/200 (49.50%), Query Frame = 1 Query: 40 DTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKC-FGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQ 636 +++ ++ ++YV +L S +E L F G+++S V RD K+ + +VNF + + +A+E LN + + S+R+ L+ K N++IKNL ID++ L FS FG+I S K+ D G S+G GFV F A A+ +NG ++ + +YVA +++R ++L+ Sbjct: 29 ESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRI----MWSQRDPSLR------------KKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLE 212
BLAST of FC918123 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3) HSP 1 Score: 227.254 bits (578), Expect = 8.327e-59 Identity = 129/281 (45.91%), Postives = 170/281 (60.50%), Query Frame = 1 Query: 4 VYVGHFLRRLERDTEISK--SKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQM-------RPVAMASTVAPRMPMYXXXXXXIEQQIFYGQGPPAMIPPQPAFGYQQQLVPGMRP 819 V+VG F R ER+ E+ +FTNVY+KN +E L++ FG+YG S VM D +GKSK FGFV+FE +DA +AV+ +NGK + K +VG+AQKK ER+ ELK +FEQ ++ ++QG NLY+KNLDD IDDE+L+ F PFG ITS KVM + G S+G GFV FS+PEEA+ A+ EMNGR+V +KPLYVALA RKE+R+A L Q+ Q PV P + +Y G A + P P + Q G RP Sbjct: 168 VFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRVPNPVINPYQPPPSSYFMAAIPPAQNRAAYYPPGQIAQLRPSPRWTAQ-----GARP 442 HSP 2 Score: 141.739 bits (356), Expect = 4.601e-33 Identity = 79/208 (37.98%), Postives = 123/208 (59.13%), Query Frame = 1 Query: 34 ERDTEISKSKFTNVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDGDGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQFAQMR 657 +RD + KS N+++KNL S + L +F +G I S V+ D +G SK +GFV+FE + A RA++ +NG +D++ +VG+ + + ERE EL A + TN+YIKN D ++DE+LK +F +G S KVM D G S+G GFV+F E+A A+ EMNG+ + K ++V A +K +R+ L+ +F QM+ Sbjct: 88 QRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAEL----------GARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMK 284 HSP 3 Score: 88.5817 bits (218), Expect = 4.623e-17 Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 1 Query: 70 NVYVKNLS*STTEEDLQKSFGEYGTIASAVVMRDG-DGKSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAADKFQGTNLYIKNLDDSIDDEKLKHLFSPFGNITSCKVMRDPRGISRGSGFVAFSTPEEASIALLEMNGRMVVSKPLYVALA*RKEDRRARLQAQ 642 ++YV +L TE L + F G I S V RD +S + +VNF+ DA RA++ +N + + S+R+ L+ K N++IKNLD SID++ L FS FGNI SCKV+ D G S+G GFV F T E A A+ +MNG ++ + ++V +++R A L A+ Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRI----MWSQRDPSLR------------KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGAR 186 The following BLAST results are available for this feature:
BLAST of FC918123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >FC918123 ID=FC918123; Name=FC918123; organism=Citrus clementina; type=EST; length=821bpback to top |