FC918129
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918129 vs. ExPASy Swiss-Prot
Match: GLYG_MOUSE (Glycogenin-1 OS=Mus musculus GN=Gyg1 PE=2 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 3.446e-22 Identity = 63/178 (35.39%), Postives = 99/178 (55.62%), Query Frame = 3 Query: 225 TDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLL-----ANPNQVRPKRFWGVYTKLKIFNMTNYKKVVYLDADTIVIKNIEDLFKCRKFCA--NLKHSERLNSGVMVVEPSAAVFNDMMTKVNTLGSYTGGDQGFLNSYYSDFPNAHV 737 TDQA+VTL D + G VLG S++ + + MVVL S VSD +K+L+ V + +L A+ ++ TKL +++T Y K V++DADT+V+ NI+DLF+ + A + + NSGV V +PS +N ++ + GS+ GGDQG LN+Y+S + + Sbjct: 2 TDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRMVVLTSPQVSDSMRKVLETVFDDVIMVDVLDSGDSAHLTLMKRPELGITLTKLHCWSLTQYSKCVFMDADTLVLSNIDDLFEREELSAAPDPGWPDCFNSGVFVYQPSIETYNQLLHLASEQGSFDGGDQGLLNTYFSGWATTDI 179
BLAST of FC918129 vs. ExPASy Swiss-Prot
Match: GLYG_RAT (Glycogenin-1 OS=Rattus norvegicus GN=Gyg1 PE=2 SV=4) HSP 1 Score: 103.219 bits (256), Expect = 1.710e-21 Identity = 62/178 (34.83%), Postives = 98/178 (55.06%), Query Frame = 3 Query: 225 TDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLL-----ANPNQVRPKRFWGVYTKLKIFNMTNYKKVVYLDADTIVIKNIEDLFKCRKFCA--NLKHSERLNSGVMVVEPSAAVFNDMMTKVNTLGSYTGGDQGFLNSYYSDFPNAHV 737 TDQA+VTL D + G VLG S++ + + VVL S VSD +K+L+ V + +L A+ ++ TKL +++T Y K V++DADT+V+ NI+DLF+ + A + + NSGV V +PS +N ++ + GS+ GGDQG LN+Y+S + + Sbjct: 2 TDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRTVVLASPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPELGITLTKLHCWSLTQYSKCVFMDADTLVLSNIDDLFEREELSAAPDPGWPDCFNSGVFVYQPSIETYNQLLHLASEQGSFDGGDQGLLNTYFSGWATTDI 179
BLAST of FC918129 vs. ExPASy Swiss-Prot
Match: GLYG_HUMAN (Glycogenin-1 OS=Homo sapiens GN=GYG1 PE=1 SV=4) HSP 1 Score: 101.679 bits (252), Expect = 4.976e-21 Identity = 60/178 (33.71%), Postives = 98/178 (55.06%), Query Frame = 3 Query: 225 TDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLL-----ANPNQVRPKRFWGVYTKLKIFNMTNYKKVVYLDADTIVIKNIEDLFKCRKFCA--NLKHSERLNSGVMVVEPSAAVFNDMMTKVNTLGSYTGGDQGFLNSYYSDFPNAHV 737 TDQA+VTL D + G VLG S++ + + +VVL + VSD +K+L+ V + +L A+ ++ TKL +++T Y K V++DADT+V+ NI+DLF + A + + NSGV V +PS +N ++ + GS+ GGDQG LN+++S + + Sbjct: 2 TDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAAPDPGWPDCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDI 179
BLAST of FC918129 vs. ExPASy Swiss-Prot
Match: GLYG_RABIT (Glycogenin-1 OS=Oryctolagus cuniculus GN=GYG1 PE=1 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 2.470e-20 Identity = 58/178 (32.58%), Postives = 98/178 (55.06%), Query Frame = 3 Query: 225 TDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLL-----ANPNQVRPKRFWGVYTKLKIFNMTNYKKVVYLDADTIVIKNIEDLFKCRKFCA--NLKHSERLNSGVMVVEPSAAVFNDMMTKVNTLGSYTGGDQGFLNSYYSDFPNAHV 737 TDQA+VTL D + G VLG S++ +++ + VL + VSD +K L+ V + +L A+ ++ TKL +++T Y K V++DADT+V+ NI+DLF+ + A + + NSGV V +PS +N ++ + GS+ GGDQG LN++++ + + Sbjct: 2 TDQAFVTLTTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPDPGWPDCFNSGVFVYQPSVETYNQLLHVASEQGSFDGGDQGLLNTFFNSWATTDI 179
BLAST of FC918129 vs. ExPASy Swiss-Prot
Match: GLYG2_HUMAN (Glycogenin-2 OS=Homo sapiens GN=GYG2 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.498e-17 Identity = 59/183 (32.24%), Postives = 98/183 (53.55%), Query Frame = 3 Query: 213 GSQSTDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLANPNQV------RPKRFWGVYTKLKIFNMTNYKKVVYLDADTIVIKNIEDLFKCRKFCA--NLKHSERLNSGVMVVEPSAAVFNDMMTKVNTLGSYTGGDQGFLNSYYSDFPNAHV 737 G TDQA+VTL D + G VLG+S+R + +VVL++ VS + +L V +++L+ + + + RP+ TKL + +T+Y K V+LDADT+V+ N+++LF +F A + + NSGV V +PS ++ GS+ G DQG LNS++ ++ + Sbjct: 31 GMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIEVNLIDSADYIHLAFLKRPE-LGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEFSAAPDPGWPDCFNSGVFVFQPSLHTHKLLLQHAMEHGSFDGADQGLLNSFFRNWSTTDI 212
BLAST of FC918129 vs. ExPASy Swiss-Prot
Match: YR707_MIMIV (Uncharacterized protein R707 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R707 PE=4 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.645e-14 Identity = 56/187 (29.95%), Postives = 92/187 (49.20%), Query Frame = 3 Query: 234 AYVTLLYGDE-FLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLANPNQV---RPKRFWGVYTKLKIFNMTNYKKVVYLDADTIVIKNIEDLFK------CRK--------------FCANLKHSERLNSGVMVVEPSAAVFNDM---MTKVNTLGSYTGGDQGFLNSYY 713 AYVT++YG+ +L G VLG +++ T + D V+L + VS+ + LK + I + + RF V+TKL ++T Y K++ LD D I+ KNI+ LFK C K C+N K +N+G+M++EP + D+ + K N +G + +Q +L+ Y Sbjct: 5 AYVTVIYGNNIYLTGALVLGYTLQQTNTKYDRVILATKDVSEEYRSYLKKYYTHIIDIDYVKVNEDIFLEENTRFHDVFTKLSCLSLTQYDKIILLDLDMIIAKNIDHLFKLSAPAACLKRFHIPYGQKIPPKMICSNGKLVGSINAGLMLLEPDKREWEDIKKDIVKENFIGKFKYPEQDYLSLRY 191 The following BLAST results are available for this feature:
BLAST of FC918129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC918129 ID=FC918129; Name=FC918129; organism=Citrus clementina; type=EST; length=794bpback to top |