FC918137
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918137 vs. ExPASy Swiss-Prot
Match: UBP25_ARATH (Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis thaliana GN=UBP25 PE=1 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.520e-67 Identity = 137/210 (65.24%), Postives = 151/210 (71.90%), Query Frame = 3 Query: 279 LAHELQMSWQPSLLSEXXXXXXXXXXXXXXXXSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKXXXXXXXXXXXXXXXXXXXVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKE 908 + +LQMSW PSLLS+ +CYLNSVLQCLT+TPPLANFCL +HSS C D+ +D ERKR+CPFCI+EKRI RSLSVDLT DAP KI SCL+IFAEHFK GRQEDAHEFLRYVIDACHNT LRLKKLR VVKEIFGGALQSQVKCL+CGAESNK DEIMDISL+IL S S+KE Sbjct: 1 MGFKLQMSWMPSLLSQKRRNGPPLGLRNLGN-TCYLNSVLQCLTFTPPLANFCLTHKHSSHC-----DTYVDGERKRDCPFCIVEKRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLR----------YNGNEPFNGNSVVKEIFGGALQSQVKCLSCGAESNKADEIMDISLEILQSSSVKE 194
BLAST of FC918137 vs. ExPASy Swiss-Prot
Match: UBP36_HUMAN (Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens GN=USP36 PE=1 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 1.760e-23 Identity = 62/177 (35.03%), Postives = 92/177 (51.98%), Query Frame = 3 Query: 375 SCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKLRRKXXXXXXXXXXXXXXXXXXXVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSL 902 +C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++ IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL R+ +V +IFGG L+S+VKC C + S+ D +D++L+I + ++ Sbjct: 130 TCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANI 281
BLAST of FC918137 vs. ExPASy Swiss-Prot
Match: UBP36_MOUSE (Ubiquitin carboxyl-terminal hydrolase 36 OS=Mus musculus GN=Usp36 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.298e-23 Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 3 Query: 375 SCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKLRRKXXXXXXXXXXXXXXXXXXXVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSL 902 +C+LNS +QCLTYTPPLAN+ L +H+ C Q C C+++ +V++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL R+ +V +IFGG L+S+VKC C + S+ D +DI+L+I + ++ Sbjct: 130 TCFLNSTIQCLTYTPPLANYLLSKEHARSCHQ-----------GGFCMLCLMQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKLDRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANI 281
BLAST of FC918137 vs. ExPASy Swiss-Prot
Match: UBP42_HUMAN (Ubiquitin carboxyl-terminal hydrolase 42 OS=Homo sapiens GN=USP42 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 2.541e-22 Identity = 63/171 (36.84%), Postives = 88/171 (51.46%), Query Frame = 3 Query: 375 SCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKLRRKXXXXXXXXXXXXXXXXXXXVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 884 +C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++ I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL R +V +IFGG L+S+VKCL C S+ D +DI+L+I Sbjct: 119 TCFANAALQCLTYTPPLANYMLSHEHSKTC-----------HAEGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDR--------------HTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEI 264
BLAST of FC918137 vs. ExPASy Swiss-Prot
Match: UBP16_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 16 OS=Schizosaccharomyces pombe GN=ubp16 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.174e-21 Identity = 61/177 (34.46%), Postives = 86/177 (48.59%), Query Frame = 3 Query: 375 SCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDA----PAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKXXXXXXXXXXXXXXXXXXXVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 893 +C++NSVLQ +T TPPL + L QHS C R C C +E+ + R+ T A P+ IQS L++ + HF+ RQEDAHEF+RY++DA +CL+ K VV IFGG L+ Q+ C C SN ++D+S+D S Sbjct: 133 TCFMNSVLQLMTQTPPLVQYLLSGQHSLSC------------RMNACVLCRMEQHVARAYPNKGTKRASAFKPSGIQSMLKVISSHFRPYRQEDAHEFMRYLVDAWQKSCLQNHK-------------NLDHPSRETSVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVDAKGS 284
BLAST of FC918137 vs. ExPASy Swiss-Prot
Match: U17L8_HUMAN (Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8 OS=Homo sapiens GN=USP17L8 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.174e-21 Identity = 61/178 (34.27%), Postives = 86/178 (48.31%), Query Frame = 3 Query: 375 SCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKXXXXXXXXXXXXXXXXXXXVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKE 908 +CYLN+ LQCLTYTPPLAN+ L +HS C +R + C C ++ I L +P + + A F G+QEDAHEFL + +DA CL K ++ +IFGG +SQ+KCL C S+ D +DI+LDI + S+K+ Sbjct: 88 TCYLNASLQCLTYTPPLANYMLSREHSQTC-----------QRPKCCMLCTMQAHIT------WALHSPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHK-------------QVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQ 235
BLAST of FC918137 vs. ExPASy Swiss-Prot
Match: UBP17_HUMAN (Ubiquitin carboxyl-terminal hydrolase 17 OS=Homo sapiens GN=USP17A PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.378e-20 Identity = 60/178 (33.71%), Postives = 86/178 (48.31%), Query Frame = 3 Query: 375 SCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKXXXXXXXXXXXXXXXXXXXVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKE 908 +CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++ I R+ L P + + A F G+QEDAHEFL + +DA CL K ++ +IFGG +SQ+KCL C S+ D +DI+LDI + S+++ Sbjct: 88 TCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQAHITRA------LHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHK-------------QVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQ 235
BLAST of FC918137 vs. ExPASy Swiss-Prot
Match: U17L6_HUMAN (Ubiquitin carboxyl-terminal hydrolase 17-like protein 6 OS=Homo sapiens GN=USP17L6 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.378e-20 Identity = 60/178 (33.71%), Postives = 86/178 (48.31%), Query Frame = 3 Query: 375 SCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKXXXXXXXXXXXXXXXXXXXVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKE 908 +CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++ I R+ L P + + A F G+QEDAHEFL + +DA CL K ++ +IFGG +SQ+KCL C S+ D +DI+LDI + S+++ Sbjct: 88 TCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQAHITRA------LHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHK-------------QVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQ 235
BLAST of FC918137 vs. ExPASy Swiss-Prot
Match: U17L5_HUMAN (Ubiquitin carboxyl-terminal hydrolase 17-like protein 5 OS=Homo sapiens GN=USP17L5 PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.378e-20 Identity = 60/178 (33.71%), Postives = 86/178 (48.31%), Query Frame = 3 Query: 375 SCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKXXXXXXXXXXXXXXXXXXXVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKE 908 +CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++ I R+ L P + + A F G+QEDAHEFL + +DA CL K ++ +IFGG +SQ+KCL C S+ D +DI+LDI + S+++ Sbjct: 88 TCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQAHITRA------LHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHK-------------QVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQ 235
BLAST of FC918137 vs. ExPASy Swiss-Prot
Match: UBPW_MOUSE (Ubiquitin carboxyl-terminal hydrolase DUB-1 OS=Mus musculus GN=Dub1 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.057e-20 Identity = 58/178 (32.58%), Postives = 87/178 (48.88%), Query Frame = 3 Query: 375 SCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKXXXXXXXXXXXXXXXXXXXVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKE 908 SCYLN+ LQCLT+TPPLA++ L +HS C G C C +E + +SL + D F +H +QEDAHEFL + ++ H +CL++ + + + +IFGG +SQ+KCL C S+ D +DI LDI ++ S+K+ Sbjct: 59 SCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEG-----------CKLCAMEALVTQSLLHSHSGDVMKPSHILTSAFHKH----QQEDAHEFLMFTLETMHESCLQVHRQSKPTSEDSSP-------------IHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIPLDISSAQSVKQ 208 The following BLAST results are available for this feature:
BLAST of FC918137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC918137 ID=FC918137; Name=FC918137; organism=Citrus clementina; type=EST; length=922bpback to top |