FC918192

Overview
NameFC918192
Unique NameFC918192
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length935
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC918192 vs. ExPASy Swiss-Prot
Match: TOM6_ARATH (Mitochondrial import receptor subunit TOM6 homolog OS=Arabidopsis thaliana GN=TOM6 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.439e-13
Identity = 32/42 (76.19%), Postives = 38/42 (90.48%), Query Frame = 2 
Query:   71 MFPGMFMKKPDKAAALKQLRSHVAMFGTWVVVIRVTPYLLHY 196
            MFPGMFM+KPDKA ALKQLR+HVA+FG+WVV+IR  PY+L Y
Sbjct:    1 MFPGMFMRKPDKAEALKQLRTHVALFGSWVVIIRAAPYVLSY 42
The following BLAST results are available for this feature:
BLAST of FC918192 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TOM6_ARATH6.439e-1376.19Mitochondrial import receptor subunit TOM6 homolog... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA33CE12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA33CE12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918192 ID=FC918192; Name=FC918192; organism=Citrus clementina; type=EST; length=935bp
CAGCAACAAAACATATTGAAGCGTCTGATCAACAGAGTAACACAAAGCTA
GGGTTTAAGCCGAAGCAAGGATGTTTCCGGGAATGTTCATGAAGAAGCCA
GACAAGGCGGCGGCCTTGAAGCAGCTGCGGAGCCACGTGGCCATGTTCGG
GACCTGGGTCGTTGTGATTCGCGTCACCCCCTACCTTCTTCACTATTTCT
CCAGAGAAAAAGAAGAGCTCAAGCTCGAATTCTAACTCTCTCTTTCTCTC
TCTAGGTATTGTTTATCAATTGTTTTAAATAGTTACGAGTTTGATGTGAT
TAGGGATTGATCGATGTGGTAAAGTTCGATTATTGATTTTGTTGTGAAGT
GGGCATTCGTCGGTTTCTTCTTTGTTTTGATTCTTTTTGTGGTTTGCATG
AGTATTTAATTTAGGTTGTGTGATGATTTTTTGTTTTATTTAGGTTGTTT
TTGTGAATAGTCCAAATACAACTAAGATGTTTTTAATCTATGAGACGCAT
TATTTCAATTAGTTAGTAAGTAGCAGGAATTCAGAAATGTCGACAAGGTA
TAGGAGATTGCTGGTCAATGGTTACTTTGCTGCCCCTTTGAATTAGTATT
ATTACTGAGCTTGATGAAGAGGAGGATTGCAAGGAGTGGTTAAGCAGTGG
AACACTAAATTCGTTGTTGGGATGATTATTCCCAATGTCAAATATATGGC
GCAAAACAATTAATGTGATTTATGCACAGCTAAAGATATATGTTATATAA
TGTCGCTGACTATACCAACGGGGGCATCGAGATACTTAGATTGCCTATTT
TCTTCTCCATACACTCCTGATCAACAAGTCTGTTGCATTTGCCATTACTT
CTTTACANGGGAAATAGTTTGCTGGATAAGCGTGTCATAAATGTCTCCCT
CGTCTGTATTGTTAGAAACAAACCATGATTGGCTT
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