FC918194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918194 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.348e-41 Identity = 97/240 (40.42%), Postives = 147/240 (61.25%), Query Frame = 3 Query: 177 YQPII-----ESEATDASC-RLENVLSDTNLSCFKR--LQIASWLELKLLVRLAAPAVFVYLINNLMSLSTRVFCGHLGNLELAAASLGNSGIQLLAYGLMLGMGSAVETLCGQAYGAGRYEMLGVYMQRATFVLLATGVPVMMVYIFCKPMLILLGESTAVASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVLPSAYISAATXXXXXXXXXXXXYKFGAGLIGASLVLKLSWYIIV 872 Y+P++ +S+ T+ S +E L + R L++A W E KLL L+ ++ V ++N ++S T +F GHLG+L+LA AS+ GIQ LAYG+MLGM SAV+T+CGQAYGA +Y +G+ QRA + LA V + +Y + P+L +G+S A+A +F G+IPQI+A+A+ P+Q+FLQAQ+IV P AY+S GL+GA+L+L SW+++V Sbjct: 7 YEPLLTRLHSDSQITERSSPEIEEFLRRRGSTVTPRWWLKLAVW-ESKLLWTLSGASIVVSVLNYMLSFVTVMFTGHLGSLQLAGASIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSFSWWLLV 245
BLAST of FC918194 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe GN=SPCC4B3.13 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.886e-21 Identity = 69/248 (27.82%), Postives = 119/248 (47.98%), Query Frame = 3 Query: 120 TEAQRHRGTAMESPVEAAQYQPIIESEATDASCRLENVLSDTNLSCFKRLQIASWLELKLLVRLAAPAVFVYLINNLMSLSTRVFCGHLGNLELAAASLGNSGIQLLAYGLMLGMGSAVETLCGQAYGAGRYEMLGVYMQRATFVLLATGVPVMMVYIFCKPMLILLGESTAVASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVLPSAYISAATXXXXXXXXXXXXYK--FGAGLIGASLVLKLS 857 T + R ++ P Y + E+E ++ +V D N + W EL LL++ A P V L+ ++T GHLG ELAAASL N + A+ + G+ SA++T+ Q++G+G YEM+G+++QR +LL P+ +++ + +L+ L + AA ++ ++ AYA+ +++FLQ Q I P YI A + G G +GA + + L+ Sbjct: 47 TTSLRKPTPRVQRPATDVSYGALEETEENESIASGLSVQEDFNSKAW-------WKELTLLIKFATPVVLTSLLQYGEVVTTVFSLGHLGKTELAAASLSNMTATITAFAIYQGIVSALDTVGTQSFGSGNYEMVGLHLQRILAILLLIQFPIFLIWWKIEGILLFLRQDPLTCMFAAKYMRVMMLASPAYALFEALKRFLQVQGIFHPVTYILAIVVPINIFLNYLFVWSPWVGFGFLGAPVAVALT 287
BLAST of FC918194 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.227e-18 Identity = 61/194 (31.44%), Postives = 96/194 (49.48%), Query Frame = 3 Query: 288 ELKLLVRLAAPAVFVYLINNLMSLSTRVFCGHLGNLELAAASLGNSGIQLLAYGLMLGMGSAVETLCGQAYGAGRYEMLGVYMQRATFVLLATGVPVMMVYIFCKPMLILLGESTAVASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVLPSAYISAATXXXXXXXXXXXXYKFGAGLIGASLVLKLSWYII 869 EL+ L+ LA PA V L+ L+S + VFCGHLG LEL A +L + I + + G+ SA +TL Q YG+ + +GV +QR+ VLL P +++ + +L+L + V+ +V IP + A + K+L Q IVLP A ++ G+IG++L +S Y + Sbjct: 34 ELRALLVLAGPAFLVQLMVFLISFISSVFCGHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGVIGSALANLISQYTL 227
BLAST of FC918194 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.603e-18 Identity = 56/185 (30.27%), Postives = 95/185 (51.35%), Query Frame = 3 Query: 288 ELKLLVRLAAPAVFVYLINNLMSLSTRVFCGHLGNLELAAASLGNSGIQLLAYGLMLGMGSAVETLCGQAYGAGRYEMLGVYMQRATFVLLATGVPVMMVYIFCKPMLILLGESTAVASAAALFVYGLIPQIFAYAVNFPIQ-KFLQAQSIVLPSAYISAATXXXXXXXXXXXXYKFGAGLIGAS 839 E LV LA P L+ L+S+ + +FCGHLG +EL A +L S + + + G+ SA +TL Q++G + +GV +QR +LL P +++ + +L+LL + VA A ++V IP + A A F +Q ++LQ+Q I++P + A Y G++G++ Sbjct: 43 EAAALVALAGPVFLAQLMIFLISIVSSIFCGHLGKVELDAVTLAVSVVNVTGISVGTGLASACDTLMSQSFGGKNLKRVGVILQRGILILLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPALPA-AFLFQLQTRYLQSQGIIMPQVIVGIAANVVNVGMNAFLLYALDLGVVGSA 226
BLAST of FC918194 vs. ExPASy Swiss-Prot
Match: YAO6_SCHPO (Uncharacterized transporter C11D3.06 OS=Schizosaccharomyces pombe GN=SPAC11D3.06 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.094e-18 Identity = 58/193 (30.05%), Postives = 96/193 (49.74%), Query Frame = 3 Query: 288 ELKLLVRLAAPAVFVYLINNLMSLSTRVFCGHLGNLELAAASLGNSGIQLLAYGLMLGMGSAVETLCGQAYGAGRYEMLGVYMQRATFVLLATGVPVMMVYIFCKPMLILLGESTAVASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVLPSAYISAATXXXXXXXXXXXXYKFGAGLIGASLVLKLSWYI 866 E+K L+ +AP + Y + N + S+ + G LG EL+ A+ + + LG +A +TL +GAG+ + LG+ +Q VL +P+ +V+ + KP+LI L ++ +A A+ F+ LIP Y ++KFLQ Q I +YI T + +G GL GA L LS+++ Sbjct: 7 EVKYLLINSAPVILGYALQNSLQTSSVIVTGRLGPSELSVAAFAYMFAMSTGWLIALGGTTAFDTLGSNLWGAGKKQELGILLQTGFIVLSILYLPICLVWWYSKPILIFLHQTPELAEASQKFLRYLIPGGLGYVCFELLKKFLQTQEITRAGSYILLVTSPLNVALNFLLVHYYGLGLKGAPLATGLSYWL 199
BLAST of FC918194 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.734e-18 Identity = 55/200 (27.50%), Postives = 96/200 (48.00%), Query Frame = 3 Query: 267 LQIASWLELKLLVRLAAPAVFVYLINNLMSLSTRVFCGHLGNLELAAASLGNSGIQLLAYGLMLGMGSAVETLCGQAYGAGRYEMLGVYMQRATFVLLATGVPVMMVYIFCKPMLILLGESTAVASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVLPSAYISAATXXXXXXXXXXXXYKFGAGLIGASLVLKLSWYI 866 L + W E + L+ LAAPA L+ L+S+ + +FCGHLG +EL A SL + I + + G+ A +TL Q +G +++G+ +QR +LL P + I + +L+L + V+ ++V +P + A + + K+LQ Q I+ P Y G G++G++ +S +I Sbjct: 41 LPMEVWQEAQQLLALAAPAFLSQLMIFLISIVSSIFCGHLGKVELDAVSLAITIINITGVAVGTGLAGACDTLISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPALPAAFLYQLLAKYLQNQGIIYPQVLTGFIANIFNALFNYILLYVLGLGVMGSACANTVSQFI 240
BLAST of FC918194 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.734e-18 Identity = 60/194 (30.93%), Postives = 95/194 (48.97%), Query Frame = 3 Query: 288 ELKLLVRLAAPAVFVYLINNLMSLSTRVFCGHLGNLELAAASLGNSGIQLLAYGLMLGMGSAVETLCGQAYGAGRYEMLGVYMQRATFVLLATGVPVMMVYIFCKPMLILLGESTAVASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVLPSAYISAATXXXXXXXXXXXXYKFGAGLIGASLVLKLSWYII 869 EL+ L+ LA PA V L+ L+S + VFCGHLG LEL A +L + I + + G+ SA +TL Q YG+ + +GV +QR+ +LL P +++ + +L+L + V+ +V IP + A + K+L Q IVLP A ++ G IG++L +S Y + Sbjct: 34 ELRALLVLAGPAFLVQLMVFLISFISSVFCGHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALILLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGAIGSALANLISQYTL 227
BLAST of FC918194 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 4.664e-18 Identity = 60/194 (30.93%), Postives = 94/194 (48.45%), Query Frame = 3 Query: 288 ELKLLVRLAAPAVFVYLINNLMSLSTRVFCGHLGNLELAAASLGNSGIQLLAYGLMLGMGSAVETLCGQAYGAGRYEMLGVYMQRATFVLLATGVPVMMVYIFCKPMLILLGESTAVASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVLPSAYISAATXXXXXXXXXXXXYKFGAGLIGASLVLKLSWYII 869 EL+ L+ LA PA L+ L+S + VFCGHLG LEL A +L + I + + G+ SA +TL Q YG+ + +GV +QR T +LL P ++I + +L+L + V+ +V IP + A + K+L Q IVLP A Y G++G++L +S + + Sbjct: 34 ELRALLVLAGPAFLAQLMMFLISFISSVFCGHLGKLELDAVTLAIAVINVTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMIFIPALPAAFLYTLQVKYLLNQGIVLPQIMTGIAANLVNALANYVFLYHLHLGVMGSALANTISQFAL 227
BLAST of FC918194 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.091e-18 Identity = 59/194 (30.41%), Postives = 95/194 (48.97%), Query Frame = 3 Query: 288 ELKLLVRLAAPAVFVYLINNLMSLSTRVFCGHLGNLELAAASLGNSGIQLLAYGLMLGMGSAVETLCGQAYGAGRYEMLGVYMQRATFVLLATGVPVMMVYIFCKPMLILLGESTAVASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVLPSAYISAATXXXXXXXXXXXXYKFGAGLIGASLVLKLSWYII 869 EL+ L+ LA PA L+ L+S + VFCGHLG LEL A +L + I + + G+ SA +TL Q YG+ + +GV +QR T +LL P ++I + +L+L + V+ +V IP + A + K+L Q IVLP A ++ G++G++L +S + + Sbjct: 33 ELRALLVLAGPAFLAQLMMFLISFISSVFCGHLGKLELDAVTLAIAVINVTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMVFIPALPAAFLYTLQVKYLLNQGIVLPQVITGIAANLVNALANYLFLHQLHLGVMGSALANTISQFAL 226
BLAST of FC918194 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.091e-18 Identity = 57/185 (30.81%), Postives = 93/185 (50.27%), Query Frame = 3 Query: 288 ELKLLVRLAAPAVFVYLINNLMSLSTRVFCGHLGNLELAAASLGNSGIQLLAYGLMLGMGSAVETLCGQAYGAGRYEMLGVYMQRATFVLLATGVPVMMVYIFCKPMLILLGESTAVASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVLPSAYISAATXXXXXXXXXXXXYKFGAGLIGASL 842 EL+ L+ LA PA L+ L+S + VFCGHL LEL A +L + I ++ + G+ SA +TL Q YG+ + +GV +QR + +LL +P +++ + +L+L + AV+ +V IP + A + K+L Q IVLP A Y+ G++G++L Sbjct: 33 ELRALLVLACPAFLAQLMVFLISFVSSVFCGHLSKLELNAVTLAIAVINVMGVSVGFGLSSACDTLISQTYGSRNLKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQTYVTIFIPALPATFLYTLQVKYLLNQGIVLPQVVTGVAANLVNALANYLFVYQLHLGVMGSAL 217 The following BLAST results are available for this feature:
BLAST of FC918194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC918194 ID=FC918194; Name=FC918194; organism=Citrus clementina; type=EST; length=882bpback to top |