FC918200

Overview
NameFC918200
Unique NameFC918200
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length526
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918200 vs. ExPASy Swiss-Prot
Match: PT110_ORYSJ (Probable inorganic phosphate transporter 1-10 OS=Oryza sativa subsp. japonica GN=PHT1-10 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.845e-31
Identity = 66/94 (70.21%), Postives = 78/94 (82.98%), Query Frame = 2
Query:  185 VLSALDSAKTQYYHFKAIIIAGMGLFTDAYDLFCIPPIMKLLGRIYYSDGADRFQI-PNAVVSRGGALALLGTVIGQLVFGRLGDLIGRRRVYG 463
            VL+ALD A+TQYYHFKAI+IAGMGLFTD+YDLFCI P+MK++GR+YYSDG  R  + P AVVS    +ALLG VIG +VFG LGD +GRRRVYG
Sbjct:    6 VLTALDQARTQYYHFKAIVIAGMGLFTDSYDLFCIAPVMKIVGRVYYSDGGARPGVTPPAVVSATVGVALLGAVIGNVVFGALGDRVGRRRVYG 99          
BLAST of FC918200 vs. ExPASy Swiss-Prot
Match: PHT18_ARATH (Probable inorganic phosphate transporter 1-8 OS=Arabidopsis thaliana GN=PHT1-8 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.322e-29
Identity = 63/98 (64.29%), Postives = 78/98 (79.59%), Query Frame = 2
Query:  173 MALKVLSALDSAKTQYYHFKAIIIAGMGLFTDAYDLFCIPPIMKLLGRIYYSDGADRFQIPNAVVSRGGALALLGTVIGQLVFGRLGDLIGRRRVYGI 466
            M +KVLS+LD A+TQ+YHFKAII+AGMGLFTDAYDLFCI P+MK++  +YY+  +    I  AV+S   A+ALLGT  GQLVFG LGD +GRRRVYG+
Sbjct:    1 MPIKVLSSLDVARTQWYHFKAIIVAGMGLFTDAYDLFCIAPVMKMISHVYYNGDS----INTAVLSTSYAIALLGTATGQLVFGYLGDRVGRRRVYGL 94          
BLAST of FC918200 vs. ExPASy Swiss-Prot
Match: PHT19_ORYSJ (Probable inorganic phosphate transporter 1-9 OS=Oryza sativa subsp. japonica GN=PHT1-9 PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 1.461e-28
Identity = 62/102 (60.78%), Postives = 76/102 (74.51%), Query Frame = 2
Query:  179 LKVLSALDSAKTQYYHFKAIIIAGMGLFTDAYDLFCIPPIMKLLGRIYYS-------DGADRFQIPNAVVSRGGALALLGTVIGQLVFGRLGDLIGRRRVYG 463
            ++VL+ALD A+TQYYHFKAI+IAGMGLFTD+YDLFCI P+MK+ GR+YY+        G+     P AVVS    +ALLG V G +VFG LGD +GRRRVYG
Sbjct:    5 IRVLAALDQARTQYYHFKAIVIAGMGLFTDSYDLFCISPVMKIFGRVYYAPSGSVDGSGSGPGVTPPAVVSATVGVALLGAVAGNVVFGALGDRVGRRRVYG 106          
BLAST of FC918200 vs. ExPASy Swiss-Prot
Match: PHT19_ARATH (Probable inorganic phosphate transporter 1-9 OS=Arabidopsis thaliana GN=PHT1-9 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.256e-28
Identity = 60/97 (61.86%), Postives = 78/97 (80.41%), Query Frame = 2
Query:  179 LKVLSALDSAKTQYYHFKAIIIAGMGLFTDAYDLFCIPPIMKLLGRIYYSDGADRFQIPNAVVSRGGALALLGTVIGQLVFGRLGDLIGRRRVYGIT 469
            L +LSALD+A+ Q+YHFKAII+AGMGLFTDAYDLFCI PIMK++ +IYY     +  I  A++S   A+ALLGT +GQL+FG LGD +GRR+VYG++
Sbjct:    4 LSLLSALDAARIQWYHFKAIIVAGMGLFTDAYDLFCIAPIMKMISQIYY----HKDSIGTALLSTSYAIALLGTALGQLIFGYLGDRVGRRKVYGLS 96          
BLAST of FC918200 vs. ExPASy Swiss-Prot
Match: PT112_ORYSJ (Probable inorganic phosphate transporter 1-12 OS=Oryza sativa subsp. japonica GN=PHT1-12 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.198e-26
Identity = 59/99 (59.60%), Postives = 74/99 (74.75%), Query Frame = 2
Query:  179 LKVLSALDSAKTQYYHFKAIIIAGMGLFTDAYDLFCIPPIMKLLGRIYYSDGADRF--QIPNAVVSRGGALALLGTVIGQLVFGRLGDLIGRRRVYGIT 469
            L+VL+ALD+AKTQ+YHF AII+AGMG FTDAYDLFCI  + KLLGRIYY+D A      +P  + +    +AL GT+ GQL FG LGD +GR+ VYG+T
Sbjct:    8 LQVLNALDAAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYTDPASPTPGSLPPNIAAAVNGVALCGTLSGQLFFGWLGDKLGRKSVYGMT 106          
BLAST of FC918200 vs. ExPASy Swiss-Prot
Match: PHT18_ORYSJ (Probable inorganic phosphate transporter 1-8 OS=Oryza sativa subsp. japonica GN=PHT1-8 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 8.867e-26
Identity = 59/99 (59.60%), Postives = 74/99 (74.75%), Query Frame = 2
Query:  179 LKVLSALDSAKTQYYHFKAIIIAGMGLFTDAYDLFCIPPIMKLLGRIYYSDGA--DRFQIPNAVVSRGGALALLGTVIGQLVFGRLGDLIGRRRVYGIT 469
            L+VLSALD+AKTQ+YHF AI++AGMG FTDAYDLFCI  + KLLGRIYY+D A  +   +P  V +    +A  GT+ GQL FG LGD +GR+ VYG+T
Sbjct:   10 LQVLSALDAAKTQWYHFTAIVVAGMGFFTDAYDLFCISLVTKLLGRIYYTDLAKENPGSLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKLGRKSVYGMT 108          
BLAST of FC918200 vs. ExPASy Swiss-Prot
Match: PHT17_ORYSJ (Probable inorganic phosphate transporter 1-7 OS=Oryza sativa subsp. japonica GN=PHT1-7 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 8.867e-26
Identity = 59/99 (59.60%), Postives = 75/99 (75.76%), Query Frame = 2
Query:  179 LKVLSALDSAKTQYYHFKAIIIAGMGLFTDAYDLFCIPPIMKLLGRIYY-SDGADR-FQIPNAVVSRGGALALLGTVIGQLVFGRLGDLIGRRRVYGIT 469
            + VLSALDSAKTQ+YHF AI+IAGMG FTDAYDLFCI  + KL+GR+YY +DGA +   +P  V +    +A +GT+ GQL FG LGD +GR+ VYG+T
Sbjct:    6 MHVLSALDSAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLIGRVYYTADGASKPGSLPPNVSAAVNGVAFVGTLTGQLFFGWLGDRVGRKSVYGMT 104          
BLAST of FC918200 vs. ExPASy Swiss-Prot
Match: PT111_ORYSJ (Inorganic phosphate transporter 1-11 OS=Oryza sativa subsp. japonica GN=PHT1-11 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.158e-25
Identity = 58/101 (57.43%), Postives = 70/101 (69.31%), Query Frame = 2
Query:  179 LKVLSALDSAKTQYYHFKAIIIAGMGLFTDAYDLFCIPPIMKLLGRIYYSDGADRFQIPNAVVSRGG----ALALLGTVIGQLVFGRLGDLIGRRRVYGIT 469
            L VL ALDSA+TQ YH KAI+IAGMG FTDAYDLFCI  + KLLGR+YY         P A+          +AL+GT++GQLVFG  GD +GR+RVYG+T
Sbjct:   10 LAVLDALDSARTQMYHMKAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYQPDGSTDSKPGALSKTANNMVIGVALVGTLMGQLVFGYFGDKLGRKRVYGVT 110          
BLAST of FC918200 vs. ExPASy Swiss-Prot
Match: PHT13_ORYSJ (Probable inorganic phosphate transporter 1-3 OS=Oryza sativa subsp. japonica GN=PHT1-3 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.512e-25
Identity = 59/99 (59.60%), Postives = 72/99 (72.73%), Query Frame = 2
Query:  179 LKVLSALDSAKTQYYHFKAIIIAGMGLFTDAYDLFCIPPIMKLLGRIYYSD--GADRFQIPNAVVSRGGALALLGTVIGQLVFGRLGDLIGRRRVYGIT 469
            LKVL+ LD A+TQ+YHF AI+IAGMG FTDAYDLFCI  + KLLGRIYY+D  G +   +P  V +    +AL GT+ GQL FG LGD +GR+ VYG T
Sbjct:    6 LKVLTTLDHARTQWYHFMAIVIAGMGFFTDAYDLFCISLVSKLLGRIYYTDLAGDNPGSLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKSVYGFT 104          
BLAST of FC918200 vs. ExPASy Swiss-Prot
Match: PHT14_ARATH (Inorganic phosphate transporter 1-4 OS=Arabidopsis thaliana GN=PHT1-4 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.580e-25
Identity = 61/102 (59.80%), Postives = 75/102 (73.53%), Query Frame = 2
Query:  170 RMALKVLSALDSAKTQYYHFKAIIIAGMGLFTDAYDLFCIPPIMKLLGRIYYS-DGADR-FQIPNAVVSRGGALALLGTVIGQLVFGRLGDLIGRRRVYGIT 469
            R  L+VL+ALD AKTQ+YHF AIIIAGMG FTDAYDLFCI  + KLLGRIYY  +GA +   +P  V +    +A  GT+ GQL FG LGD +GR++VYG+T
Sbjct:    3 REQLQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVEGAQKPGTLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMT 104          
The following BLAST results are available for this feature:
BLAST of FC918200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PT110_ORYSJ1.845e-3170.21Probable inorganic phosphate transporter 1-10 OS=O... [more]
PHT18_ARATH1.322e-2964.29Probable inorganic phosphate transporter 1-8 OS=Ar... [more]
PHT19_ORYSJ1.461e-2860.78Probable inorganic phosphate transporter 1-9 OS=Or... [more]
PHT19_ARATH3.256e-2861.86Probable inorganic phosphate transporter 1-9 OS=Ar... [more]
PT112_ORYSJ5.198e-2659.60Probable inorganic phosphate transporter 1-12 OS=O... [more]
PHT18_ORYSJ8.867e-2659.60Probable inorganic phosphate transporter 1-8 OS=Or... [more]
PHT17_ORYSJ8.867e-2659.60Probable inorganic phosphate transporter 1-7 OS=Or... [more]
PT111_ORYSJ1.158e-2557.43Inorganic phosphate transporter 1-11 OS=Oryza sati... [more]
PHT13_ORYSJ1.512e-2559.60Probable inorganic phosphate transporter 1-3 OS=Or... [more]
PHT14_ARATH2.580e-2559.80Inorganic phosphate transporter 1-4 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA1DD04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA1DD04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918200 ID=FC918200; Name=FC918200; organism=Citrus clementina; type=EST; length=526bp
AACCATGAACCCACTAGTTTACTTTGTCGTTTTTGATTATATATCTAGAT
ATATTTATATATATACAGAGAGAGAGAGATCTTGAATTAATTGTTCATGA
GCTATATAAATATCCAGCTCGCTGATGATCAAGAGCAAGCAGAATAAAGA
GATAAGAAAAAAATAAATAAGAATGGCGTTGAAAGTGCTCTCAGCGCTAG
ACTCAGCAAAGACCCAGTACTATCACTTCAAAGCCATAATAATAGCCGGG
ATGGGGCTCTTTACCGATGCCTATGACCTCTTCTGTATCCCGCCCATCAT
GAAGCTCCTCGGAAGAATCTACTACAGCGATGGCGCCGATCGATTCCAAA
TCCCAAACGCGGTCGTATCGCGGGGGGGAGCCCTGGCTTTACTGGGCACG
GTGATAGGGCAGCTGGTCTTCGGCAGACTAGGTGACCTCATCGGACGTCG
GCGCGTGTACGGGATAACTTGATGTTGATGGTGCTTACCTCCCTGCATGG
GGCTTCTCCTTTTGCCCACTAAACAA
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