FC918203

Overview
NameFC918203
Unique NameFC918203
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length879
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DJB13_HUMAN (DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.412e-32
Identity = 90/246 (36.59%), Postives = 138/246 (56.10%), Query Frame = 1
Query:  214 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAK-FKLISEAYDVLSDPRKRQIYDLYGPEGLKAS---DFG-----TPSY----------------HHPH-DIKPCATRXXXXXXHRXXXXXXXXXXXXIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGNQEPGLPAADLIFVVEEKPHAVFQRDGNDLVVNHKISLLGALT 870
            MG DYY++L ++R + +  +K++Y+RLA+K HP K+   N+ + A+ F+ I+EAYDVLSDP KR IYD +G EGLK     +FG     T  Y                ++P  +                           +E  L  +LE+L+ G  KK+KISR + +  G   T+++ IL ID+KPGW++GT+ITF ++G+Q P +  AD+IF+V+EK H  F+R+ ++L   + I L  ALT
Sbjct:    1 MGQDYYSVLGITRNSEDAQIKQAYRRLALKHHPLKS---NEPSSAEIFRQIAEAYDVLSDPMKRGIYDKFGEEGLKGGIPLEFGSQTPWTTGYVFHGKPEKVFHEFFGGNNPFSEFFDAEGSEVDLNFGGLQGRGVKKQDPQVERDLYLSLEDLFFGCTKKIKISRRVLNEDGYSSTIKDKILTIDVKPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRRENDNLFFVNPIPLGKALT 243          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DJB13_MOUSE (DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.804e-31
Identity = 89/245 (36.33%), Postives = 134/245 (54.69%), Query Frame = 1
Query:  214 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS---DFGTPS-------YHHPHD---------------IKPCATRXXXXXXHRXXXXXXXXXXXXIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGNQEPGLPAADLIFVVEEKPHAVFQRDGNDLVVNHKISLLGALT 870
            MG+DYY +L+V+R + +  +KK+Y++LA+K HP K+  +   A   FK I+EAYDVLSDP KR IYD +G EGLK     +FG+ +       +H   D                                          IE  L  +LE+L+ G  KK+KISR + +      T+++ IL ID++PGW++GT+ITF ++G+Q P +  AD+IF+V+EK H  F+R+ ++L   + I L  ALT
Sbjct:    1 MGLDYYAVLQVTRNSEDAQIKKAYRKLALKNHPLKS--SEPGAPEIFKQIAEAYDVLSDPVKRGIYDKFGEEGLKGGIPLEFGSQTPWTTGYVFHGNPDKVFHEFFGGDNPFSEFFDAEGNDIDLNFGGLWGRGVQKQDPPIERDLYLSLEDLFFGCTKKIKISRRVLNEDRYSSTIKDKILTIDVRPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRREHDNLFFVYPIPLGKALT 243          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DNJB6_PONAB (DnaJ homolog subfamily B member 6 OS=Pongo abelii GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.076e-22
Identity = 46/87 (52.87%), Postives = 62/87 (71.26%), Query Frame = 1
Query:  220 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPSYHHPHD 480
            VDYY +L V R A+ +D+KK+Y++LA+KWHPDKNP   ++AE KFK ++EAY+VLSD +KR IYD YG EGL     G   +  P +
Sbjct:    2 VDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFE 88          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DNJB6_MACFA (DnaJ homolog subfamily B member 6 OS=Macaca fascicularis GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.076e-22
Identity = 46/87 (52.87%), Postives = 62/87 (71.26%), Query Frame = 1
Query:  220 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPSYHHPHD 480
            VDYY +L V R A+ +D+KK+Y++LA+KWHPDKNP   ++AE KFK ++EAY+VLSD +KR IYD YG EGL     G   +  P +
Sbjct:    2 VDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFE 88          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DNJB6_HUMAN (DnaJ homolog subfamily B member 6 OS=Homo sapiens GN=DNAJB6 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 4.076e-22
Identity = 46/87 (52.87%), Postives = 62/87 (71.26%), Query Frame = 1
Query:  220 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPSYHHPHD 480
            VDYY +L V R A+ +D+KK+Y++LA+KWHPDKNP   ++AE KFK ++EAY+VLSD +KR IYD YG EGL     G   +  P +
Sbjct:    2 VDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFE 88          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DNJB6_BOVIN (DnaJ homolog subfamily B member 6 OS=Bos taurus GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.076e-22
Identity = 46/87 (52.87%), Postives = 62/87 (71.26%), Query Frame = 1
Query:  220 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPSYHHPHD 480
            VDYY +L V R A+ +D+KK+Y++LA+KWHPDKNP   ++AE KFK ++EAY+VLSD +KR IYD YG EGL     G   +  P +
Sbjct:    2 VDYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDRYGKEGLNGGGGGGSHFDSPFE 88          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DNAJ2_THET8 (Chaperone protein dnaJ 2 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaJ2 PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 9.081e-22
Identity = 73/212 (34.43%), Postives = 105/212 (49.53%), Query Frame = 1
Query:  223 DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYG---------PEGLKASDFGTPSYHHPHDIKPCATRXXXXXXHRXXXXXXXXXXXXIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPAADLIFVVEEKPHAVFQRDGNDL 831
            DYY IL V R AT++++K++YKRLA ++HPD N   + +AE KFK I+EAY VLSDP KR+IYD YG         P G   S F    +           +                    +  +L  TLEE + G  + ++++       G+ ++V+      I PG ++G+ I  P  G Q  G P  DL+ VV   PH VF+ +G DL
Sbjct:    6 DYYAILGVPRNATQEEIKRAYKRLARQYHPDVN--KSPEAEEKFKEINEAYAVLSDPEKRRIYDTYGTTEAPPPPPPGGYDFSGFDVEDFSE-------FFQELFGPGLFGGFGRRSRKGRDLRAELPLTLEEAFHGGERVVEVA-------GRRVSVR------IPPGVREGSVIRVPGMGGQ--GNPPGDLLLVVRLLPHPVFRLEGQDL 193          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DNJ6B_XENLA (DnaJ homolog subfamily B member 6-B OS=Xenopus laevis GN=dnajb6-B PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.186e-21
Identity = 45/83 (54.22%), Postives = 63/83 (75.90%), Query Frame = 1
Query:  220 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPSYH 468
            V+YY++L V R ++ DD+KK+Y+RLA+KWHPDKNP   ++AE +FK ++EAY+VLSD +KR IYD YG EGL     G  S++
Sbjct:    2 VEYYDVLGVQRNSSPDDIKKAYRRLALKWHPDKNPDNKEEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGLAGGGGGGGSHY 84          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.642e-21
Identity = 53/99 (53.54%), Postives = 69/99 (69.70%), Query Frame = 1
Query:  214 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK----ASDFGTPSYHHPHDIKPCAT 498
            MG DYY IL +  GA ED++KK+Y+++A+K+HPDKN   N  AE KFK I+EAYDVLSDP+KR +YD YG EGLK    +S   + S+H+     P AT
Sbjct:    1 MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPN--AEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLKTGGGSSGGSSGSFHYTFHGDPHAT 97          

HSP 2 Score: 91.2781 bits (225), Expect = 7.955e-18
Identity = 48/102 (47.06%), Postives = 72/102 (70.59%), Query Frame = 1
Query:  571 QLLCTLEELYKGARKKMKISRVLPDHFGKPI-TVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPAADLIFVVEEKPHAVFQRDGNDLVVNHKISLLGALTG 873
            +L  +LEE+Y G+ K+MKI+R   +  G+ + T  +IL I IK GWK+GTKITFP++G+  P    AD++FV+++KPHA F+RDG +++ +  ISL  AL G
Sbjct:  174 ELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCG 275          
BLAST of FC918203 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.451e-21
Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 1
Query:  214 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK----ASDFGTPSYHHPHDIKPCAT 498
            MG DYY IL +  GA ED++KK+Y+++A+K+HPDKN   N  AE KFK I+EAYDVLSDP+KR +YD YG EGLK    +S     S+H+     P AT
Sbjct:    1 MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPN--AEEKFKEIAEAYDVLSDPKKRSLYDQYGEEGLKTGGGSSGGSGGSFHYTFHGDPHAT 97          

HSP 2 Score: 91.2781 bits (225), Expect = 7.955e-18
Identity = 48/102 (47.06%), Postives = 72/102 (70.59%), Query Frame = 1
Query:  571 QLLCTLEELYKGARKKMKISRVLPDHFGKPI-TVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPAADLIFVVEEKPHAVFQRDGNDLVVNHKISLLGALTG 873
            +L  +LEE+Y G+ K+MKI+R   +  G+ + T  +IL I IK GWK+GTKITFP++G+  P    AD++FV+++KPHA F+RDG +++ +  ISL  AL G
Sbjct:  174 ELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCG 275          
The following BLAST results are available for this feature:
BLAST of FC918203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DJB13_HUMAN7.412e-3236.59DnaJ homolog subfamily B member 13 OS=Homo sapiens... [more]
DJB13_MOUSE4.804e-3136.33DnaJ homolog subfamily B member 13 OS=Mus musculus... [more]
DNJB6_PONAB4.076e-2252.87DnaJ homolog subfamily B member 6 OS=Pongo abelii ... [more]
DNJB6_MACFA4.076e-2252.87DnaJ homolog subfamily B member 6 OS=Macaca fascic... [more]
DNJB6_HUMAN4.076e-2252.87DnaJ homolog subfamily B member 6 OS=Homo sapiens ... [more]
DNJB6_BOVIN4.076e-2252.87DnaJ homolog subfamily B member 6 OS=Bos taurus GN... [more]
DNAJ2_THET89.081e-2234.43Chaperone protein dnaJ 2 OS=Thermus thermophilus (... [more]
DNJ6B_XENLA1.186e-2154.22DnaJ homolog subfamily B member 6-B OS=Xenopus lae... [more]
DNJB5_BOVIN2.642e-2153.54DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNJB5_MOUSE3.451e-2153.54DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA17AH02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA17AH02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918203 ID=FC918203; Name=FC918203; organism=Citrus clementina; type=EST; length=879bp
CTGCGCTCTACATATTCATTCATTCATCGTAACGAATAACGATTAACTAA
CCTCCCTCTCCAGTCTCCACTCCTCCTACAATACAATAATAATACTTTGA
TGGTCCAGTTCTTATAACAAACACCTTCCTTATTATTACTCGGTCTCTGT
CTCTCGTTTGTACATCTCATGATTGAATTCTGATTCACACCGACACCGAC
ACGGTCGAATAGAATGGGAGTGGATTATTATAACATACTGAAAGTGAGCC
GCGGCGCTACTGAAGATGACTTGAAGAAGTCTTACAAAAGACTCGCCATG
AAGTGGCATCCCGACAAGAATCCCGCCACCAATCAACAGGCCGAAGCCAA
GTTTAAACTCATCTCCGAGGCCTATGACGTCTTGAGTGATCCCCGTAAGC
GCCAGATCTATGATCTCTACGGCCCCGAGGGTTTGAAGGCCTCCGACTTC
GGCACGCCCTCCTATCATCATCCCCACGACATCAAGCCCTGTGCTACTCG
CAACAATAATAACAACAATCATAGAGCTGGGGGTGCTGGGCCCAAGCCCA
CCCCGACGCCCATTGAGACCCAATTGCTGTGTACCTTGGAGGAGCTTTAC
AAAGGTGCTAGAAAAAAGATGAAGATTTCTCGCGTTCTTCCTGATCATTT
TGGCAAGCCAATCACTGTCCAGGAGATCCTGAAAATTGACATTAAACCTG
GCTGGAAGAAAGGAACCAAGATCACTTTCCCCGAGAAAGGAAACCAGGAA
CCTGGTCTACCTGCGGCTGATCTTATCTTTGTGGTGGAAGAGAAACCTCA
TGCTGTTTTCCAGAGGGACGGGAACGATCTGGTGGTCAATCACAAAATCT
CACTGCTGGGAGCCCTCACAGGGCTGTCT
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