FC918211

Overview
NameFC918211
Unique NameFC918211
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length898
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918211 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.457e-47
Identity = 94/131 (71.76%), Postives = 106/131 (80.92%), Query Frame = 2
Query:  110 GMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMVR----QLVR*KVSDSRG 490
            G  EL+ NYY +SCPKAEEII+QQV  LYYKHGNTAVSW+RNLFHDC VKSCDASLLLET  GV SEQ S+RSFGMRNFKYV  IK ALE ECP  VSCADIVALSAR+GIVM++    ++++    DSRG
Sbjct:   26 GNGELEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQKSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRG 156          

HSP 2 Score: 68.1662 bits (165), Expect = 7.457e-11
Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 1
Query:  733 LGGPRIP-IKTGRXDSRVSYLAEVEKFIPNHDDSIATALSVFNSIGIDDEGVVAL 894
            L GP+I  IKTGR DSR SYL +VE  IPNH+DS+++ +S FNSIGID E  VAL
Sbjct:  139 LKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVAL 193          
BLAST of FC918211 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.544e-32
Identity = 64/110 (58.18%), Postives = 84/110 (76.36%), Query Frame = 2
Query:  122 LQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVMV 451
            L  N+Y  +CP+AE+I+++QV  LY +H NTA SW+RN+FHDCAV+SCDASLLL++      E+  +RSFG+RNF+Y+  IK ALE ECP  VSC+DI+ LSAREGI  V
Sbjct:   31 LMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAV 140          
BLAST of FC918211 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.356e-20
Identity = 45/112 (40.18%), Postives = 73/112 (65.18%), Query Frame = 2
Query:  113 MSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVM 448
            +++L+F +Y++SCP AE I++  V Q + +  +   +  R  FHDC V+ CDASLL++  T   SE+ +  +F +R F+ +  IK ALEA+CP  VSC+DIV L+ R+ + +
Sbjct:   20 LAQLKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNFSVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFL 131          
BLAST of FC918211 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.557e-19
Identity = 48/113 (42.48%), Postives = 71/113 (62.83%), Query Frame = 2
Query:  107 SGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIV 445
            S  ++LQ N+YA+SCP AE+II   +    +   + A   +R  FHDC V+ CD S+L+ + +G A E+ +  +  +R F +V  IKA LE  CP  VSCADI+AL+AR+ +V
Sbjct:   24 SSEAQLQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSGNA-ERDAPPNLTLRGFGFVERIKALLEKVCPKTVSCADIIALTARDAVV 135          
BLAST of FC918211 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.696e-19
Identity = 42/110 (38.18%), Postives = 72/110 (65.45%), Query Frame = 2
Query:  122 LQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVA-SEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVM 448
            L ++YY ++CPK EEI++  +  ++     +  + +R +FHDC V+ CDAS+LLE +     +E  S ++FG+R    V +IK +LE ECP +VSC+D++ L+AR+ + +
Sbjct:   38 LSYSYYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAVAL 147          
BLAST of FC918211 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.269e-18
Identity = 45/110 (40.91%), Postives = 71/110 (64.55%), Query Frame = 2
Query:  116 SELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIV 445
            ++LQ N+YA SCP AE+I++  V        + A + +R  FHDC V+ CD S+L+ + +G A   A+  +  +R F ++  IK+ LEA+CP  VSCADI+AL++R+ +V
Sbjct:   24 AQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGNAERDATP-NLTVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVV 132          
BLAST of FC918211 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18
Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 2
Query:  131 NYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASE-RSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVM 448
            ++Y  SCP+AEEI++  V + + +    A S +R  FHDC V+ CD SLLL+T   + +E+ S   S   R F+ V  IKAALE ECP  VSCAD + L+AR+  V+
Sbjct:   38 DFYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVL 144          
BLAST of FC918211 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.298e-18
Identity = 48/106 (45.28%), Postives = 65/106 (61.32%), Query Frame = 2
Query:  134 YYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASE-RSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVM 448
            +Y  SCP+AEEI++  V +   +    A S +R  FHDC V+ CD SLLL+T   + +E+ S   S   R F+ V  IKAALE ECP  VSCAD + L+AR+  V+
Sbjct:   40 FYRSSCPRAEEIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVL 145          
BLAST of FC918211 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.225e-18
Identity = 41/114 (35.96%), Postives = 70/114 (61.40%), Query Frame = 2
Query:  107 SGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERSFGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVM 448
            S +++L+  +Y++SCP+AE I+   V   +    +   +++R  FHDC V+ CDASLL++   G  SE+++  +  +R ++ +   K  LEA CP  VSCADIV L+ R+ + +
Sbjct:   17 SALAQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNASVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVAL 130          
BLAST of FC918211 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.225e-18
Identity = 48/115 (41.74%), Postives = 69/115 (60.00%), Query Frame = 2
Query:  107 SGMSELQFNYYAQSCPKAEEIIKQQVVQLYYKHGNTAVSWVRNLFHDCAVKSCDASLLLETVTGVASEQASERS-FGMRNFKYVSTIKAALEAECPLKVSCADIVALSAREGIVM 448
            S ++ L   +Y  SCP A+ I++  V   Y+     A S +R  FHDC V  CDAS+LL++   + SE+ S  +    R F+ +  IK+ALE ECP  VSCAD++AL AR+ IV+
Sbjct:   36 SSVASLSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVI 150          
The following BLAST results are available for this feature:
BLAST of FC918211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
PER21_ARATH6.457e-4771.76Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER42_ARATH1.544e-3258.18Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER28_ARATH1.356e-2040.18Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER30_ARATH2.557e-1942.48Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER29_ARATH5.696e-1938.18Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER3_ARATH1.269e-1840.91Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER14_ARATH1.657e-1844.86Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER15_ARATH6.298e-1845.28Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER44_ARATH8.225e-1835.96Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER36_ARATH8.225e-1841.74Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA74DD04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA74DD04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918211 ID=FC918211; Name=FC918211; organism=Citrus clementina; type=EST; length=898bp
AAAGCTTGCAAGTGCTTATCAGAAAATGGCCACTACTAAGAGGCTACGGT
TTCATCTTTCCCCAAGTTTCTTCTTTCTGTTATTACCGTTGCTCTTGCAG
TTTCATTCTGGAATGAGTGAGCTGCAGTTTAATTACTACGCACAGAGTTG
CCCAAAAGCCGAAGAAATCATCAAGCAACAAGTCGTTCAGCTATACTACA
AACATGGAAACACTGCAGTCTCCTGGGTCAGAAATCTTTTCCACGATTGC
GCCGTCAAGTCATGCGATGCATCGCTCTTGCTGGAGACAGTGACAGGTGT
TGCATCGGAGCAGGCATCGGAAAGAAGCTTTGGAATGAGAAATTTCAAGT
ACGTGAGCACAATCAAAGCAGCTCTTGAGGCTGAATGCCCCTTGAAAGTT
TCTTGCGCCGATATCGTGGCCCTTTCTGCACGAGAAGGCATTGTCATGGT
ACGTCAATTAGTTCGTTAAAAGGTCAGTGATAGCCGTGGTTTGACGAAAT
GATGACGAAAGTTTATTGTTTTAAGATTTGTAGAATCATTTTTTAACAAA
AATGGGAAGAAATTAATGTGACCATTTCTAAAATTAAGAAATCTCTGCGA
TCATTTCAGCAAACCAGGACGGCGCTATTATCCTTTTATCCTCTTGAAAA
TTGAAAATGTTTCCGAAAATCAAATTTGATTATTGAAACGGATATGTATT
ATTTTGGTGGACGTGTTAATTATTACTAACAGTTGGGAGGCCCCCGTATC
CCAATTAAAACTGGACGAANGGATAGCAGAGTGAGTTATTTGGCGGAGGT
CGAAAAGTTCATCCCCAATCACGATGATAGCATAGCCACAGCCCTTTCCG
TTTTTAATTCCATTGGCATCGATGATGAAGGAGTCGTTGCTCTTTATG
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