FC918212

Overview
NameFC918212
Unique NameFC918212
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length314
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC918212 vs. ExPASy Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.002e-20
Identity = 49/65 (75.38%), Postives = 51/65 (78.46%), Query Frame = 1 
Query:  118 FVEHCKGVNGLEKVVLREVRGCSAEIYLYGGQVISWKNEYGEELLFLSSKATFKHPKPIRGGIPI 312
            F E  K  +GLEKVVLR  R C AEIYLYGGQV SWKN+ GEELLFLSSKA FK PK IRGGIPI
Sbjct:   23 FAELVKTPSGLEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRGGIPI 87
The following BLAST results are available for this feature:
BLAST of FC918212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AAPC_CENCI3.002e-2075.38Putative glucose-6-phosphate 1-epimerase OS=Cenchr... [more]
back to top
Properties
Property NameValue
Genbank descriptionIC0AAA1DD06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA1DD06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918212 ID=FC918212; Name=FC918212; organism=Citrus clementina; type=EST; length=314bp
AAACCCGGCGCGCGATTCGATTCATCAATTTCGGTTCGATCCACTACCAC
CTCCACCGCCACGTCCACCGCCTCCGCCGCCGAAACTAACATGAATTCTC
CTTGCCGGGAGAAGCTCTTCGTGGAGCATTGTAAAGGCGTTAACGGCCTC
GAAAAAGTCGTTTTGCGCGAAGTTCGCGGCTGTTCCGCTGAGATATATCT
CTATGGGGGACAAGTAATATCTTGGAAGAACGAGTATGGGGAAGAATTGC
TTTTTCTTAGTAGCAAGGCCACTTTTAAGCATCCAAAGCCAATTCGTGGA
GGTATACCAATATG
back to top