FC918223

Overview
NameFC918223
Unique NameFC918223
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length912
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918223 vs. ExPASy Swiss-Prot
Match: CML3_ARATH (Calmodulin-like protein 3 OS=Arabidopsis thaliana GN=CML3 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 4.015e-52
Identity = 102/149 (68.46%), Postives = 117/149 (78.52%), Query Frame = 1
Query:  220 MDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMMKGGGFSAL 666
            MDQAEL R+FQMFD NGDG+I+K+ELNDSLENLGIYIPD +L QMIE+ID+NGDG VDI+EFG LY++I            AFNVFDQN DGFIT +EL+SVL SLGLKQGRT+EDCKRMI K          +KEFKQMMKGGGF+AL
Sbjct:    1 MDQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIEEFGGLYQTIMEERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRMISKVDVDGDGMVNFKEFKQMMKGGGFAAL 149          
BLAST of FC918223 vs. ExPASy Swiss-Prot
Match: CML5_ARATH (Calmodulin-like protein 5 OS=Arabidopsis thaliana GN=CML5 PE=2 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 2.602e-51
Identity = 112/213 (52.58%), Postives = 136/213 (63.85%), Query Frame = 1
Query:   73 LLRIFLLY----TFIXXXXXXXXXXXXXXSWFPA-------PALGPSLSSQSNTNPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKSI-----XXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMMKGGGFSA 663
            ++RIFLLY    +F+              SWF         P+    L S S+++     +D +EL RVFQMFD NGDGRI+K+ELNDSLENLGIYIPD +LTQMI +ID NGDGCVDIDEF +LY SI                 AFNVFDQ+GDGFIT +ELKSV+ SLGLKQG+T++ CK+MIM+          YKEF QMMKGGGFS+
Sbjct:    1 MVRIFLLYNILNSFLLSLVPKKLRTLFPLSWFDKTLHKNSPPSPSTMLPSPSSSSAPTKRIDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDIDEFESLYSSIVDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGKTLDGCKKMIMQVDADGDGRVNYKEFLQMMKGGGFSS 213          
BLAST of FC918223 vs. ExPASy Swiss-Prot
Match: CML7_ARATH (Calmodulin-like protein 7 OS=Arabidopsis thaliana GN=CML7 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.410e-50
Identity = 100/150 (66.67%), Postives = 115/150 (76.67%), Query Frame = 1
Query:  220 MDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKSI-XXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMMKGGGFSAL 666
            MD  EL RVFQMFD NGDG I+ KEL+++L +LGIYIPD ELTQMIE+IDVNGDGCVDIDEFG LYK+I             AFNVFDQNGDGFIT DELK+VL SLGLKQG+T++DCK+MI K          YKEF+QMMKGGGF++L
Sbjct:    1 MDPTELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDEFGELYKTIMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKKMIKKVDVDGDGRVNYKEFRQMMKGGGFNSL 150          
BLAST of FC918223 vs. ExPASy Swiss-Prot
Match: CML2_ARATH (Calmodulin-like protein 2 OS=Arabidopsis thaliana GN=CML2 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.059e-44
Identity = 86/150 (57.33%), Postives = 111/150 (74.00%), Query Frame = 1
Query:  220 MDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMMKGGGFSALT 669
            MD+ EL RVFQMFD NGDG+I+K EL D  +++GI +P+ E+ +MI ++DVNGDG +DIDEFG+LY+ +            AF VFDQNGDGFIT +EL+SVL S+GLKQGRT+EDCK+MI K          +KEFKQMM+GGGF+AL+
Sbjct:    1 MDRGELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEFGSLYQEMVEEKEEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKMISKVDVDGDGMVNFKEFKQMMRGGGFAALS 150          
BLAST of FC918223 vs. ExPASy Swiss-Prot
Match: CML6_ARATH (Calmodulin-like protein 6 OS=Arabidopsis thaliana GN=CML6 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.359e-44
Identity = 90/149 (60.40%), Postives = 111/149 (74.50%), Query Frame = 1
Query:  220 MDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKSI---XXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMMKGGGF 657
            MD  EL+RVFQMFD +GDG+I+ KELN+S +NLGI IP+ ELTQ+I++IDVNGDGCVDI+EFG LYK+I               AFNVFD+NGDGFIT DELK+VL SLGLKQG+T+E+C++MIM+          Y EF+QMMK G F
Sbjct:    1 MDSTELNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIEEFGELYKTIMVEDEDEVGEEDMKEAFNVFDRNGDGFITVDELKAVLSSLGLKQGKTLEECRKMIMQVDVDGDGRVNYMEFRQMMKKGRF 149          
BLAST of FC918223 vs. ExPASy Swiss-Prot
Match: CML4_ARATH (Calmodulin-like protein 4 OS=Arabidopsis thaliana GN=CML4 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.864e-44
Identity = 99/200 (49.50%), Postives = 123/200 (61.50%), Query Frame = 1
Query:   73 LLRIFLLY----TFIXXXXXXXXXXXXXXSWFPAPALGPSLSSQSNTNPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKSIXXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMMKGGGFS 660
            ++R+FLLY    +F+              SW+      P        +P        +L RVFQMFD NGDGRI+K+ELNDSLENLGI++PD +L QMI+++D NGDGCVDI+EF +LY SI            AFNVFDQ+GDGFIT +EL SV+ SLGLKQG+T+E CK MIM+          YKEF QMMK G FS
Sbjct:    1 MVRVFLLYNLFNSFLLCLVPKKLRVFFPPSWYIDDKNPPPPDESETESPV-------DLKRVFQMFDKNGDGRITKEELNDSLENLGIFMPDKDLIQMIQKMDANGDGCVDINEFESLYGSI-VEEKEEGDMRDAFNVFDQDGDGFITVEELNSVMTSLGLKQGKTLECCKEMIMQVDEDGDGRVNYKEFLQMMKSGDFS 192          
BLAST of FC918223 vs. ExPASy Swiss-Prot
Match: CML28_ORYSJ (Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica GN=CML28 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.912e-43
Identity = 90/170 (52.94%), Postives = 108/170 (63.53%), Query Frame = 1
Query:  220 MDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKSI---------------------XXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMMKGGGFSAL 666
            MD  EL +VF+MFD NGDGRI+KKEL +S +N GI+IPD EL   +++ID NGDGCVD++EFG LY+SI                                 AFNVFDQNGDGFIT DEL+SVL SLGLK GRT +DC+RMI            +KEFKQMM+GGGF+AL
Sbjct:    1 MDSTELRKVFKMFDKNGDGRITKKELGESFKNFGIFIPDDELDATMDKIDANGDGCVDVEEFGLLYRSILGDDAAGRAPRTAAAAIGGEGGAPDDEDEGMREAFNVFDQNGDGFITVDELRSVLSSLGLKHGRTADDCRRMISMVDADGDGRVDFKEFKQMMRGGGFAAL 170          
BLAST of FC918223 vs. ExPASy Swiss-Prot
Match: CML22_ORYSJ (Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica GN=CML22 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.481e-38
Identity = 85/161 (52.80%), Postives = 103/161 (63.98%), Query Frame = 1
Query:  223 DQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKSI-------------XXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMMKGGGFSAL 666
            D AEL RVF++FD NGDGRI+++EL DSL  LGI +P  EL  +I RID NGDGCVD++EFG LY+SI                         AF VFD NGDG+IT DEL +VL SLGLKQGRT E+C+RMI +          + EF QMM+GGGF+AL
Sbjct:   89 DAAELARVFELFDRNGDGRITREELEDSLGKLGIPVPADELAAVIARIDANGDGCVDVEEFGELYRSIMAGGDDSKDGRAKEEEEEEDGDMREAFRVFDANGDGYITVDELGAVLASLGLKQGRTAEECRRMIGQVDRDGDGRVDFHEFLQMMRGGGFAAL 249          
BLAST of FC918223 vs. ExPASy Swiss-Prot
Match: CML17_ORYSJ (Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica GN=CML17 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.986e-36
Identity = 80/158 (50.63%), Postives = 101/158 (63.92%), Query Frame = 1
Query:  226 QAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKSI-----------XXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMMKGGGFSAL 666
            QAEL RVF++FD +GDGRI+++EL +SLE LG+ +   EL   I RID NGDGCVD+DEF  LY+++                       AF+VFD+NGDGFIT DEL +VL SLG+KQGRT EDC RMI +          + EFKQMM+GG F+ L
Sbjct:    6 QAELRRVFELFDRDGDGRITREELTESLERLGMPVHREELAATIARIDANGDGCVDMDEFTQLYETVMRVDGGGGGGGGACDVDEASMREAFDVFDRNGDGFITVDELGAVLASLGIKQGRTAEDCGRMIGQVDRDGDGRVDFLEFKQMMRGGAFATL 163          
BLAST of FC918223 vs. ExPASy Swiss-Prot
Match: CML10_ORYSJ (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica GN=CML10 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.393e-20
Identity = 66/167 (39.52%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  157 PAPALGPSLSSQSNTNPTRSTMDQAELDRVFQMFDHNGDGRISKKELNDSLENLGIYIPDVELTQMIERIDVNGDGCVDIDEFGALYKSI-XXXXXXXXXXXXAFNVFDQNGDGFITFDELKSVLGSLGLKQGRTVEDCKRMIMKXXXXXXXXXXYKEFKQMMKGGG 654
            P P   P+ S   +  PT     + E++RVF+ FD NGDGRIS+ EL    E+LG    D EL +M+   D +GDG + +DEF AL  +              AF VFD +G+G I+  EL  VL  LG K   TV+ C+RMI            ++EFK MM GGG
Sbjct:   20 PLPQADPA-SGGGSPAPT----PEEEMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEFAALNATASGDAAAVEEDLRHAFRVFDADGNGTISAAELARVLHGLGEK--ATVQQCRRMIEGVDQNGDGLISFEEFKVMMAGGG 179          
The following BLAST results are available for this feature:
BLAST of FC918223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
CML3_ARATH4.015e-5268.46Calmodulin-like protein 3 OS=Arabidopsis thaliana ... [more]
CML5_ARATH2.602e-5152.58Calmodulin-like protein 5 OS=Arabidopsis thaliana ... [more]
CML7_ARATH6.410e-5066.67Calmodulin-like protein 7 OS=Arabidopsis thaliana ... [more]
CML2_ARATH1.059e-4457.33Calmodulin-like protein 2 OS=Arabidopsis thaliana ... [more]
CML6_ARATH2.359e-4460.40Calmodulin-like protein 6 OS=Arabidopsis thaliana ... [more]
CML4_ARATH6.864e-4449.50Calmodulin-like protein 4 OS=Arabidopsis thaliana ... [more]
CML28_ORYSJ9.912e-4352.94Probable calcium-binding protein CML28 OS=Oryza sa... [more]
CML22_ORYSJ1.481e-3852.80Probable calcium-binding protein CML22 OS=Oryza sa... [more]
CML17_ORYSJ8.986e-3650.63Probable calcium-binding protein CML17 OS=Oryza sa... [more]
CML10_ORYSJ1.393e-2039.52Probable calcium-binding protein CML10 OS=Oryza sa... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA29CD07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA29CD07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918223 ID=FC918223; Name=FC918223; organism=Citrus clementina; type=EST; length=912bp
ATAGCGTCCTCCCCCGCAGCGCCCCTAATTTAAGCGTTCATCATATATTT
TGTTCCTCAAATGCGCTCCATTTTGTTGAGAATTTTCCTTCTTTACACTT
TCATCCTTCATTTGCTCCCAAAGAAGCTCCGTCGCTTCCTCCCCCGTTCC
TGGTTCCCCGCCCCCGCTCTGGGCCCCAGCCTGTCGTCACAGTCCAACAC
GAACCCGACGCGATCGACAATGGACCAGGCAGAGCTGGACCGGGTTTTCC
AAATGTTCGACCACAACGGAGACGGGCGGATATCGAAGAAGGAGCTGAAC
GACTCGTTGGAGAACCTGGGAATATACATTCCGGACGTGGAGCTGACCCA
GATGATCGAGCGGATCGACGTCAACGGAGACGGCTGCGTCGACATCGACG
AGTTCGGGGCGCTGTACAAGTCCATCATGGAAGAGAAAGACGAGGAGGAA
GACATGAAGGAAGCGTTCAACGTGTTTGACCAGAACGGCGACGGGTTCAT
CACGTTTGACGAGTTGAAATCCGTGTTGGGGTCCCTGGGGCTCAAGCAAG
GCCGGACCGTAGAGGATTGCAAGCGGATGATCATGAAGGTCGACGTGGAC
GGTGACGGCATGGTTGATTACAAGGAGTTCAAGCAGATGATGAAAGGCGG
TGGGTTCAGTGCTTTGACTTGATTCAATTTAGAGAGGATTTTGTCTTTTT
TTTTATTCCATCATAATCAATGAAATCAATTTGTTGTTGTAAATATAAAA
TTTCCGAAACTTACAATCATACGATTTGGGTGACGGTGATGATGATGATG
ATAATGATGATTGATGATCATTCCGACGCCGTAACGCCAAGGGAGACGTC
GTGTCGTGTCGTGTCGTGTGACGAGTCAGTCGGGTAATATTTACAACTAT
CTATTAAAATCA
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