FC918226

Overview
NameFC918226
Unique NameFC918226
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length858
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918226 vs. ExPASy Swiss-Prot
Match: SAND_TAKRU (Protein SAND OS=Takifugu rubripes GN=sand PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.083e-22
Identity = 52/134 (38.81%), Postives = 83/134 (61.94%), Query Frame = 3
Query:  459 PGKRHVDEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEESYESLRGQLELLYGQMILILT-KSVNRCFEKNPKFDMTPLLGG 857
            P  R  +ED +S +WR  +KH F+LS +GKPIY+RYG E  L+     + A++SFVE+ K+ I+ + A   +V+FL K P+ LV +S T +S + L  +L+ +Y Q++ +LT   +N  F+    +D+  LL G
Sbjct:  102 PQSRSKEEDMSSEAWRSHRKHVFVLSEAGKPIYTRYGSEEALSSTMGVMMALVSFVESDKNTIRSIHADGCKVIFLAKSPLVLVGVSQTYQSDKELLRELQYIYYQIVSLLTLTQLNHIFQNKQNYDLRRLLAG 235          
BLAST of FC918226 vs. ExPASy Swiss-Prot
Match: MON1B_MOUSE (Vacuolar fusion protein MON1 homolog B OS=Mus musculus GN=Mon1b PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.523e-21
Identity = 66/181 (36.46%), Postives = 95/181 (52.49%), Query Frame = 3
Query:  318 GERGSSSEGTSNSRIGDEDDDGIQEVINDHDGFVDGVGDSSPSPSWVPGKRHVDEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEESYESLRGQLELLYGQMILILTK-SVNRCFEKNPKFDMTPLLGG 857
            GE  S+SEG      G++ DDG               GD S            DED     WR ++KH F+LS +GKPIYSRYG    L+     + A++SFV++  D I+ + A  H++VFL +GP+ LV +S T +S   LRG+L  ++ Q++  LT+ SV R F     +D+  LL G
Sbjct:   87 GEPESNSEGQ-----GEDPDDG---------------GDPS------------DED-----WRSQRKHVFVLSEAGKPIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAVSRTPQSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAG 230          
BLAST of FC918226 vs. ExPASy Swiss-Prot
Match: MON1B_HUMAN (Vacuolar fusion protein MON1 homolog B OS=Homo sapiens GN=MON1B PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.303e-21
Identity = 51/126 (40.48%), Postives = 78/126 (61.90%), Query Frame = 3
Query:  483 DDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEESYESLRGQLELLYGQMILILTK-SVNRCFEKNPKFDMTPLLGG 857
            D +   WR ++KH F+LS +GKPIYSRYG    L+     + A++SFV++  D I+ + A  H++VFL +GP+ LV +S T +S   LRG+L  ++ Q++  LT+ SV R F     +D+  LL G
Sbjct:   99 DPSDEEWRSQRKHVFVLSEAGKPIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTSQSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAG 224          
BLAST of FC918226 vs. ExPASy Swiss-Prot
Match: MON1B_MACFA (Vacuolar fusion protein MON1 homolog B OS=Macaca fascicularis GN=MON1B PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.635e-20
Identity = 53/143 (37.06%), Postives = 83/143 (58.04%), Query Frame = 3
Query:  432 DSSPSPSWVPGKRHVDEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEESYESLRGQLELLYGQMILILTK-SVNRCFEKNPKFDMTPLLGG 857
            ++SP+ S          D +   WR ++KH F+LS +GKPIY RYG    L+     + A++SFV++  D I+ + A  H++VFL +GP+ LV +S T +S   LRG+L  ++ Q++  LT+ SV R F     +D+  LL G
Sbjct:   82 ENSPTRSPESSSGGQGGDPSDEEWRSQRKHVFVLSEAGKPIYLRYGSVEALSATMGVMTALVSFVQSAGDTIRAIYAEDHKLVFLQQGPLLLVAMSRTSQSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAG 224          
BLAST of FC918226 vs. ExPASy Swiss-Prot
Match: MON1A_MACFA (Vacuolar fusion protein MON1 homolog A OS=Macaca fascicularis GN=MON1A PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.635e-20
Identity = 48/133 (36.09%), Postives = 83/133 (62.41%), Query Frame = 3
Query:  462 GKRHVDEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEESYESLRGQLELLYGQMILILT-KSVNRCFEKNPKFDMTPLLGG 857
            G    DE+DA+ +WR  +KH F+LS +GKP+YSRYG E  L+     + A++SF+E  K+ I+ + A  ++VVF+ + P+ LV ++ T +S + L  +L  +Y Q++ +LT   ++  F++   +D+  LL G
Sbjct:  138 GTAEGDEEDATEAWRLHQKHVFVLSEAGKPVYSRYGSEEALSSTMGVMVALVSFLEADKNAIRSIHADGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQKQNYDLRRLLSG 270          
BLAST of FC918226 vs. ExPASy Swiss-Prot
Match: MON1A_HUMAN (Vacuolar fusion protein MON1 homolog A OS=Homo sapiens GN=MON1A PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.635e-20
Identity = 48/133 (36.09%), Postives = 83/133 (62.41%), Query Frame = 3
Query:  462 GKRHVDEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEESYESLRGQLELLYGQMILILT-KSVNRCFEKNPKFDMTPLLGG 857
            G    DE+DA+ +WR  +KH F+LS +GKP+YSRYG E  L+     + A++SF+E  K+ I+ + A  ++VVF+ + P+ LV ++ T +S + L  +L  +Y Q++ +LT   ++  F++   +D+  LL G
Sbjct:  138 GTTEGDEEDATEAWRLHQKHVFVLSEAGKPVYSRYGSEEALSSTMGVMVALVSFLEADKNAIRSIHADGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQKQNYDLRRLLSG 270          
BLAST of FC918226 vs. ExPASy Swiss-Prot
Match: MON1A_BOVIN (Vacuolar fusion protein MON1 homolog A OS=Bos taurus GN=MON1A PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.136e-20
Identity = 46/128 (35.94%), Postives = 83/128 (64.84%), Query Frame = 3
Query:  477 DEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEESYESLRGQLELLYGQMILILT-KSVNRCFEKNPKFDMTPLLGG 857
            DE++A+ +WR+ +KH F+LS +GKP+YSRYG E  L+     + A++SF+E  K+ I+ + A  ++VVF+ + P+ LV ++ T +S + L  +L  +Y Q++ +LT   ++  F++   +D+  LL G
Sbjct:  143 DEEEAAEAWRRHQKHVFVLSEAGKPVYSRYGSEEALSSTMGVMVALVSFLEADKNAIRSIHADGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQKQNYDLRRLLSG 270          
BLAST of FC918226 vs. ExPASy Swiss-Prot
Match: MON1A_MOUSE (Vacuolar fusion protein MON1 homolog A OS=Mus musculus GN=Mon1a PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 3.643e-20
Identity = 47/133 (35.34%), Postives = 83/133 (62.41%), Query Frame = 3
Query:  462 GKRHVDEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEESYESLRGQLELLYGQMILILT-KSVNRCFEKNPKFDMTPLLGG 857
            G    +E+DA+ +WR  +KH F+LS +GKP+YSRYG E  L+     + A++SF+E  K+ I+ + A  ++VVF+ + P+ LV ++ T +S + L  +L  +Y Q++ +LT   ++  F++   +D+  LL G
Sbjct:  139 GSTEGEEEDATEAWRLHQKHVFVLSEAGKPVYSRYGSEEALSSTMGVMVALVSFLEADKNAIRSIHADGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQKQNYDLRRLLSG 271          
BLAST of FC918226 vs. ExPASy Swiss-Prot
Match: MON1A_CHICK (Vacuolar fusion protein MON1 homolog A OS=Gallus gallus GN=MON1A PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.214e-20
Identity = 57/190 (30.00%), Postives = 102/190 (53.68%), Query Frame = 3
Query:  324 RGSSSEGTSNSRIGDEDD-----------DGIQEVINDHDGFVDGVGDSSPSPSWVPGKRHVDEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEESYESLRGQLELLYGQMILILT-KSVNRCFEKNPKFDMTPLLGG 857
            RG  +E TS  +I  +             D  +E+    +G ++    ++   S + GK   +ED    +WR  +KH F+LS +GKP+YSRYG E  L+     + A++SF+E  K+ I+ + A  ++VVF+ + P+ LV ++ T +S + +  +L  +Y Q++ +LT   +N  F++   +D+  LL G
Sbjct:   77 RGEPAEPTSMEQISKDFSELSTQLTGMALDLEEEMRQSQEGKLEPSPQATRHDSVLSGKE--EEDVTMDTWRMHRKHVFVLSEAGKPVYSRYGSEEALSSTMGVMMALVSFLEAEKNAIRSIHADGYKVVFVRRSPLVLVAVARTRQSEQEIAHELLYIYYQILSLLTWTQLNHIFQQKQNYDLRRLLAG 264          
BLAST of FC918226 vs. ExPASy Swiss-Prot
Match: MON1_COCIM (Vacuolar fusion protein MON1 OS=Coccidioides immitis GN=MON1 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.028e-19
Identity = 61/169 (36.09%), Postives = 95/169 (56.21%), Query Frame = 3
Query:  354 SRIGDEDDDGIQEVINDHDGFVDGVGDSSPSPSWVPGKRHVDEDDASISWRKRKKHFFILSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGKDRIKLVRAGKHQVVFLIKGPIYLVCISCTEESYESLRGQLELLYGQMILILT-KSVNRCFEKNPKFDM-TPLLG 854
            S  G EDDD   +  ++ D   D   D +       G + ++E      WR+++KH+FILS +GKPIY+R+GD+  ++ + A +Q IISF +   + +K   AG+ ++V L +GP++LV IS   ES   LR QL+ LY Q++  LT  ++   F   P  D+  PL G
Sbjct:  183 SEPGLEDDDLSLDFESEFDCVEDIAADDN-------GDKILEE------WRQKRKHYFILSAAGKPIYTRHGDDGLISPYIAIIQTIISFHQESSNPLKSFSAGRTKIVILSQGPLHLVAISRLLESDSQLRNQLDALYMQILSTLTLPALQHIFAVRPSTDLRRPLQG 338          
The following BLAST results are available for this feature:
BLAST of FC918226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
SAND_TAKRU5.083e-2238.81Protein SAND OS=Takifugu rubripes GN=sand PE=3 SV=... [more]
MON1B_MOUSE2.523e-2136.46Vacuolar fusion protein MON1 homolog B OS=Mus musc... [more]
MON1B_HUMAN4.303e-2140.48Vacuolar fusion protein MON1 homolog B OS=Homo sap... [more]
MON1B_MACFA1.635e-2037.06Vacuolar fusion protein MON1 homolog B OS=Macaca f... [more]
MON1A_MACFA1.635e-2036.09Vacuolar fusion protein MON1 homolog A OS=Macaca f... [more]
MON1A_HUMAN1.635e-2036.09Vacuolar fusion protein MON1 homolog A OS=Homo sap... [more]
MON1A_BOVIN2.136e-2035.94Vacuolar fusion protein MON1 homolog A OS=Bos taur... [more]
MON1A_MOUSE3.643e-2035.34Vacuolar fusion protein MON1 homolog A OS=Mus musc... [more]
MON1A_CHICK6.214e-2030.00Vacuolar fusion protein MON1 homolog A OS=Gallus g... [more]
MON1_COCIM4.028e-1936.09Vacuolar fusion protein MON1 OS=Coccidioides immit... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA96BA03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA96BA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918226 ID=FC918226; Name=FC918226; organism=Citrus clementina; type=EST; length=858bp
ACCACTCTTCGCAAAAAGAAACCCACGCTTCTCTTTCAAAGTACCCAAAA
AAAAAACCCTAAATTGAACCCAATTCCAATCCAATGTCCACCAGCTCTTC
ATCGCCATCCTCCGATGAAGAACTCATTTTTAACCCTAACCCTATCCCTA
AGCCGATTGATGACGAATTGACGCTGGCGTCGTTAACATTGACCGAGTCT
AACGGTAATGGATCGGTGGGCGAAAGCGATCGTTACGGTGGTGCTGGGGT
GGTGTTGGAGGCGGAGCGGGAAGGGGAAAGGGAGGGGCCATCGAGTCCGA
GTAGTAGTGGGTATGCTGGAGAGAGAGGGAGCAGTAGCGAGGGGACGAGT
AACTCGAGAATTGGTGATGAGGACGATGATGGGATACAGGAAGTGATAAA
TGATCATGATGGTTTTGTTGATGGAGTTGGGGATTCTTCACCCTCGCCCT
CGTGGGTCCCCGGCAAACGCCACGTCGATGAGGACGATGCTTCCATATCA
TGGAGAAAGAGAAAGAAACACTTCTTTATTTTGAGTCATTCTGGAAAACC
GATATATTCCAGATATGGAGATGAACATAAACTTGCAGGATTTTCTGCAA
CATTGCAAGCAATTATCTCCTTTGTAGAGAATGGGAAAGATCGTATCAAA
TTGGTTAGGGCAGGAAAACATCAGGTAGTATTTCTCATCAAGGGACCAAT
CTACTTAGTTTGCATCAGCTGCACAGAAGAGTCTTATGAATCATTGAGGG
GACAATTGGAGCTTCTTTATGGCCAGATGATACTTATTTTAACTAAGTCC
GTAAACAGATGTTTTGAGAAGAACCCGAAGTTCGATATGACACCTTTGCT
TGGGGGAA
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