FC918230

Overview
NameFC918230
Unique NameFC918230
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length941
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918230 vs. ExPASy Swiss-Prot
Match: NOS1_ARATH (Nitric oxide synthase 1 OS=Arabidopsis thaliana GN=NOS1 PE=1 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 3.850e-90
Identity = 171/264 (64.77%), Postives = 191/264 (72.35%), Query Frame = 1
Query:  103 HHFTNSTPKFLKTYTKPTL-IVCKSTLS---PETQFESDGAGAAAPTRGDRFLELQKAKEAXXXXXXXXXXXXXXXXXXXXX----NSAVASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQLKTVLCGRCRLLSHGHMITAVXXXXXXXXXKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKIDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKG 870
            H  T   P     Y  PT  IVCKS  +   P +  E DG  AAAPT G+RFLE Q+A EA                         +++V+ CYGCGAPLQTS+ D+PG+VD  TYELKKKHHQL+T++CGRC+LLSHGHMITAV         KQFVSADELREKLSHLR EKALIVKLVDIVDFNGSFLAR+RDL GANPIILV+TKIDLLPKGTD NC+GDWVVE T +KKLNVLSVHLTSSKSL G+ GVASEIQKEKKG
Sbjct:   16 HTTTRREPNLTVIYRNPTTSIVCKSIANSEPPVSLSERDGFAAAAPTPGERFLENQRAHEAQKVVKKEIKKEKKKKKEEIIARKVVDTSVSCCYGCGAPLQTSDVDSPGFVDLVTYELKKKHHQLRTMICGRCQLLSHGHMITAVGGNGGYPGGKQFVSADELREKLSHLRHEKALIVKLVDIVDFNGSFLARVRDLVGANPIILVITKIDLLPKGTDMNCIGDWVVEVTMRKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKG 279          

HSP 2 Score: 34.6538 bits (78), Expect = 3.850e-90
Identity = 18/26 (69.23%), Postives = 19/26 (73.08%), Query Frame = 3
Query:  861 EKGGGTFTFLGSANGGKSAFINALLK 938
            EK G     LG+AN GKSAFINALLK
Sbjct:  276 EKKGRDVYILGAANVGKSAFINALLK 301          
BLAST of FC918230 vs. ExPASy Swiss-Prot
Match: NOS_ORYSJ (Putative nitric oxide synthase OS=Oryza sativa subsp. japonica GN=Os02g0104700 PE=3 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 2.770e-80
Identity = 157/250 (62.80%), Postives = 179/250 (71.60%), Query Frame = 1
Query:  148 KPTLIVCKSTLSPETQFES-----DGAGAAAPTRGDRFLELQKAKEAXXXXXXXXXXXXXXXXXXXXXNSA----VASCYGCGAPLQTSESDAPGYVDPDTYELKKKHHQLKTVLCGRCRLLSHGHMITAVXXXXXXXXXKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKIDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKG 870
            KP L    S+ SP     +     +GAG AAP+RGDRFL  Q A EA                       A     A+CYGCGAPLQT++  APGYV P TY+LKK+HHQL+TVLCGRC+LLSHGHMITAV         KQFVSAD+LR+KLS+LR EKALI+KLVDIVDFNGSFLAR+RD AGANPIILV+TK+DLLP+ TD NC+GDWVVEA  KKKLNVLSVHLTSSKSL G+ GV SEIQ+EKKG
Sbjct:   22 KPQLAPNPSSFSPTRAASTAPPPPEGAGPAAPSRGDRFLGTQLAAEAAARVLAPEDAERRRRRREKRKALARKPSAAACYGCGAPLQTADEAAPGYVHPATYDLKKRHHQLRTVLCGRCKLLSHGHMITAVGGHGGYPGGKQFVSADQLRDKLSYLRHEKALIIKLVDIVDFNGSFLARVRDFAGANPIILVITKVDLLPRDTDLNCIGDWVVEAVVKKKLNVLSVHLTSSKSLVGVTGVISEIQQEKKG 271          
BLAST of FC918230 vs. ExPASy Swiss-Prot
Match: YQEH_BACSU (Uncharacterized protein yqeH OS=Bacillus subtilis GN=yqeH PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.945e-14
Identity = 53/172 (30.81%), Postives = 81/172 (47.09%), Query Frame = 1
Query:  355 CYGCGAPLQTSESDAPGYVDPDTYELKKKHHQLKTVLCGRCRLLSHGHMITAVXXXXXXXXXKQFVSADELREKLSHLRREKALIVKLVDIVDFNGSFLARIRDLAGANPIILVVTKIDLLPKGTDFNCVGDWVVEATTKKKLNVLSVHLTSSKSLAGIVGVASEIQKEKKG 870
            C GCG  +QT +    GY  P +  L K++     V+C RC  L + + I  V            ++ D+    L  +    +L+VK+VDI DFNGS++  ++ L G NPI+LV  K D+LPK      +  W+     +  L  + V L S+    GI  V   I+  + G
Sbjct:    6 CIGCGVTIQTEDKTGLGYAPPAS--LTKEN-----VICQRCFRLKNYNEIQDVS-----------LTDDDFLNILHGIGETDSLVVKIVDIFDFNGSWINGLQRLVGGNPILLVGNKADILPKSLKRERLIQWMKREAKELGLKPVDVFLVSAGRGQGIREVIDAIEHYRNG 159          

HSP 2 Score: 23.8682 bits (50), Expect = 2.945e-14
Identity = 10/26 (38.46%), Postives = 15/26 (57.69%), Query Frame = 3
Query:  864 KGGGTFTFLGSANGGKSAFINALLKK 941
            + G     +G  N GKS FIN ++K+
Sbjct:  157 RNGKDVYVVGCTNVGKSTFINRIIKE 182          
The following BLAST results are available for this feature:
BLAST of FC918230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
NOS1_ARATH3.850e-9064.77Nitric oxide synthase 1 OS=Arabidopsis thaliana GN... [more]
NOS_ORYSJ2.770e-8062.80Putative nitric oxide synthase OS=Oryza sativa sub... [more]
YQEH_BACSU2.945e-1430.81Uncharacterized protein yqeH OS=Bacillus subtilis ... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA62BH06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA62BH06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918230 ID=FC918230; Name=FC918230; organism=Citrus clementina; type=EST; length=941bp
CAAACCCACTGTCACAGCTGAAGCTCACTCATACAACGCAACGGTTGCTA
ATTTATGGCGCTTAAAACGCTCACAACATTTCTCTCCCCGCTCTCTCTCC
CCCACCACTTCACAAACTCTACCCCTAAATTCCTCAAAACTTACACTAAA
CCCACTCTCATAGTTTGCAAATCAACGCTCTCACCCGAGACCCAATTCGA
ATCCGACGGAGCCGGAGCCGCCGCCCCGACCCGCGGGGACCGGTTCCTTG
AGCTCCAAAAAGCTAAGGAGGCTTCCAAGGTAGTCGTAAGAGACAGTAAG
AAGAAAAGGAAGAAGAAAGATAAGGTTTTGAAGGTTAACTCTGCCGTTGC
TTCTTGTTACGGCTGTGGAGCTCCGTTGCAGACCTCGGAGTCGGATGCTC
CGGGTTATGTTGACCCGGATACGTATGAATTGAAGAAGAAACACCACCAG
CTTAAAACTGTGCTTTGTGGGAGGTGTCGGCTTTTATCCCATGGACACAT
GATAACTGCGGTTGGAGGAAATGGAGGTTACGCCGGTGGGAAGCAGTTTG
TTTCAGCCGATGAGCTCAGGGAGAAGCTGTCTCACTTACGTCGTGAGAAA
GCTTTAATTGTTAAATTGGTTGATATTGTGGACTTCAATGGCAGCTTTTT
GGCTCGTATACGTGATCTTGCTGGTGCAAATCCAATAATATTAGTTGTGA
CCAAGATTGATCTTCTTCCGAAAGGAACAGATTTTAATTGTGTTGGCGAT
TGGGTTGTAGAAGCTACAACAAAGAAGAAGCTTAACGTCTTGAGTGTTCA
TCTCACCAGTTCAAAGTCTTTAGCAGGAATTGTGGGAGTTGCATCAGAGA
TTCAAAAGGAGAAAAAGGGGGCGGGACGTTTACATTTCTGGGGTCAGCTA
ATGGTGGGAAGTCAGCATTCATCAATGCATTACTCAAAAAA
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