FC918234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918234 vs. ExPASy Swiss-Prot
Match: OPDA_HAEIN (Oligopeptidase A OS=Haemophilus influenzae GN=prlC PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.646e-30 Identity = 63/187 (33.69%), Postives = 114/187 (60.96%), Query Frame = 1 Query: 259 NPLLQDFEFPPFDVVKAEHVRPGIRALLKQLESDLDELERTVEPSWPKLVEPLEKIVDQLTVVWGMINHLKSVKDTPELRSAIEEVQPEKVKFQLRLGQSKPIYNAFKAIQESPEWNALSHARKRIVESQIKEAVLNGVSLEDDKREQFNKIEQELEKLSHKFSENVLDATKKFEKLITDKKEIEXL 819 NPLL PPF +K EH+RP + L++ + ++++ + +W + PL + D+L W ++HL SVK++ ELR A + P ++ +GQ K +YNA+ A++ S E+ S A+K+ +E+ +++ L+G+ L ++K++++ +I L +L+ +FS NVLDAT +EKLI ++ E+ L Sbjct: 5 NPLLNIQGLPPFSQIKPEHIRPAVEKLIQDCRNTIEQVLKQPHFTWENFILPLTETNDRLNRAWSPVSHLNSVKNSTELREAYQTCLPLLSEYSTWVGQHKGLYNAYLALKNSAEFADYSIAQKKAIENSLRDFELSGIGLSEEKQQRYGEIVARLSELNSQFSNNVLDATMGWEKLIENEAELAGL 191
BLAST of FC918234 vs. ExPASy Swiss-Prot
Match: OPDA_SALTY (Oligopeptidase A OS=Salmonella typhimurium GN=prlC PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29 Identity = 64/185 (34.59%), Postives = 112/185 (60.54%), Query Frame = 1 Query: 259 NPLLQDFEFPPFDVVKAEHVRPGIRALLKQLESDLDELERTVEP-SWPKLVEPLEKIVDQLTVVWGMINHLKSVKDTPELRSAIEEVQPEKVKFQLRLGQSKPIYNAFKAIQESPEWNALSHARKRIVESQIKEAVLNGVSLEDDKREQFNKIEQELEKLSHKFSENVLDATKKFEKLITDKKEI 810 NPLL F PPF +K EHV P + L + ++ + P SW L +PL + D L ++ I+HL SVK++PELR A E+ P ++ +GQ + +YNA++ +++ + L+ A+K+ V++ +++ L+G+ L +K++++ +I L +L +++S NVLDAT + KLITD+ E+ Sbjct: 3 NPLLTSFSLPPFSAIKPEHVVPAVTKALADCRAAVEGVVAHGAPYSWENLCQPLAEADDVLGRIFSPISHLNSVKNSPELREAYEQTLPLLSEYSTWVGQHEGLYNAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLSELGNQYSNNVLDATMGWTKLITDEAEL 187
BLAST of FC918234 vs. ExPASy Swiss-Prot
Match: OPDA_ECOLI (Oligopeptidase A OS=Escherichia coli (strain K12) GN=prlC PE=3 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 2.613e-28 Identity = 60/185 (32.43%), Postives = 112/185 (60.54%), Query Frame = 1 Query: 259 NPLLQDFEFPPFDVVKAEHVRPGIRALLKQLESDLDELERTVEP-SWPKLVEPLEKIVDQLTVVWGMINHLKSVKDTPELRSAIEEVQPEKVKFQLRLGQSKPIYNAFKAIQESPEWNALSHARKRIVESQIKEAVLNGVSLEDDKREQFNKIEQELEKLSHKFSENVLDATKKFEKLITDKKEI 810 NPLL FE PPF + EHV P + L +++ + P +W L +PL ++ D L ++ ++HL SVK++PELR A E+ P ++ +GQ + +Y A++ +++ + L+ A+K+ V++ +++ L+G+ L +K++++ +I L +L +++S NVLDAT + KL+TD+ E+ Sbjct: 3 NPLLTPFELPPFSKILPEHVVPAVTKALNDCRENVERVVAQGAPYTWENLCQPLAEVDDVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQHEGLYKAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLSELGNQYSNNVLDATMGWTKLVTDEAEL 187 The following BLAST results are available for this feature:
BLAST of FC918234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC918234 ID=FC918234; Name=FC918234; organism=Citrus clementina; type=EST; length=819bpback to top |