FC920201
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920201 vs. ExPASy Swiss-Prot
Match: HPPD_ARATH (4-hydroxyphenylpyruvate dioxygenase OS=Arabidopsis thaliana GN=HPD PE=1 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 1.817e-51 Identity = 96/155 (61.94%), Postives = 115/155 (74.19%), Query Frame = 2 Query: 8 SDRFRVNRFHHVEFWCTDATNTSRHFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPNSPXXXXXXXXXXXXXXLPTFDHAACRSFSASHGLAARSIAVEIEDTDVAFYTRVAHRAKPSSPHVILDNLDVIAEVQLYGDVVLRYVSYK 472 SD+F+V RFHH+EFWC DATN +R FSWGLGM AKSDLSTGN VHASYLL SGDLRF+FTAP SP +P+FDH +CRSF +SHGL R++A+E+ED + AF VA+ A PSSP ++L+ IAEV+LYGDVVLRYVSYK Sbjct: 39 SDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYK 193
BLAST of FC920201 vs. ExPASy Swiss-Prot
Match: HPPD_DAUCA (4-hydroxyphenylpyruvate dioxygenase OS=Daucus carota PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 7.396e-45 Identity = 91/154 (59.09%), Postives = 110/154 (71.43%), Query Frame = 2 Query: 8 SDRFRVNRFHHVEFWCTDATNTSRHFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPNSPXXXXXXXXXXXXXXLPTFDHAACRSFSASHGLAARSIAVEIEDTDVAFYTRVAHRAKPSSPHVILDNLDVIAEVQLYGDVVLRYVSY 469 SD F V RFHH+EFWC DATNTSR FSWGLGMP+VAKSDLSTGN+VHASYL+RS +L FVFTAP SP +P+F + SF+A HGLA R+IA+E+ D AF VA A+P+S V LD+ +AEV+LYGDVVLR+VS+ Sbjct: 38 SDHFAVKRFHHIEFWCGDATNTSRRFSWGLGMPLVAKSDLSTGNSVHASYLVRSANLSFVFTAPYSP----STTTSSGSAAIPSFSASGFHSFAAKHGLAVRAIALEVADVAAAFEASVARGARPASAPVELDDQAWLAEVELYGDVVLRFVSF 187
BLAST of FC920201 vs. ExPASy Swiss-Prot
Match: HPPD_SOLSC (4-hydroxyphenylpyruvate dioxygenase OS=Solenostemon scutellarioides PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 2.152e-44 Identity = 90/154 (58.44%), Postives = 111/154 (72.08%), Query Frame = 2 Query: 8 SDRFRVNRFHHVEFWCTDATNTSRHFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPNSPXXXXXXXXXXXXXXLPTFDHAACRSFSASHGLAARSIAVEIEDTDVAFYTRVAHRAKPSSPHVILDNLD-VIAEVQLYGDVVLRYVS 466 SD F V+RFHHVEFWC DATNTSR FSWGLGMP+VAKSDLSTGN+ HASYLLRSG+L FVFTAP SP +PTF + R+F++SHGLA R++A++++ A+ V+ AKP SP V+L + + IAEV LYGD VLR+VS Sbjct: 31 SDHFPVHRFHHVEFWCGDATNTSRRFSWGLGMPLVAKSDLSTGNSAHASYLLRSGELSFVFTAPYSP-----SLAEPSSASIPTFSFSDHRAFTSSHGLAVRAVAIQVDSASSAYSAAVSRGAKPVSPPVVLADCETAIAEVHLYGDTVLRFVS 179
BLAST of FC920201 vs. ExPASy Swiss-Prot
Match: HPPD_HORVU (4-hydroxyphenylpyruvate dioxygenase OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 4.972e-33 Identity = 75/156 (48.08%), Postives = 94/156 (60.26%), Query Frame = 2 Query: 8 SDRFRVNRFHHVEFWCTDATNTSRHFSWGLGMPIVAKSDLSTGNTVHASYLLRSGDLRFVFTAPNSPXXXXXXXXXXXXXXLPTFDHAACRSFSASHGLAARSIAVEIEDTDVAFYTRVAHRAKPSSPHVILDNLDVIAEVQLYGDVVLRYVSYKD 475 SDRF FHHVEFWC DA + + F++ LG P+ A+SDLSTGN+ HAS LLRSG L F+FTAP + LP+F A R FSA HG+A RS+A+ + D AF A+P+ V L AEV+LYGDVVLR+VS+ D Sbjct: 34 SDRFHTLSFHHVEFWCADAASAAGRFAFALGAPLAARSDLSTGNSAHASQLLRSGSLAFLFTAPYA------NGCDAATASLPSFSADAARRFSADHGIAVRSVALRVADAAEAFRASRRRGARPAFAPVDLGRGFAFAEVELYGDVVLRFVSHPD 183 The following BLAST results are available for this feature:
BLAST of FC920201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920201 ID=FC920201; Name=FC920201; organism=Citrus clementina; type=EST; length=497bpback to top |