FC920208
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1Z_ARATH (Eukaryotic peptide chain release factor subunit 1-3 OS=Arabidopsis thaliana GN=ERF1-3 PE=2 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 2.804e-81 Identity = 148/160 (92.50%), Postives = 156/160 (97.50%), Query Frame = 2 Query: 227 QETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNT 706 QE+DKNIEIWKIKKLIK LE+ARGNGTSMISLIMPPRDQ++RVTKML DE+GTASNIKSRVNRQSVL+AITSAQQRLKLYNKVPPNGLVLYTGT+VTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTE LNELLESD +FGFIVMDGNGTLFGTLSGNT Sbjct: 4 QESDKNIEIWKIKKLIKGLETARGNGTSMISLIMPPRDQVARVTKMLADEYGTASNIKSRVNRQSVLSAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEPLNELLESDDKFGFIVMDGNGTLFGTLSGNT 163
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1X_ARATH (Eukaryotic peptide chain release factor subunit 1-1 OS=Arabidopsis thaliana GN=ERF1-1 PE=2 SV=2) HSP 1 Score: 300.827 bits (769), Expect = 4.784e-81 Identity = 147/164 (89.63%), Postives = 157/164 (95.73%), Query Frame = 2 Query: 215 MSDGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNT 706 M D + DKNIEIWKIKKLIK+LE+ARGNGTSMISLIMPPRDQ+SRVTKMLGDE+GTASNIKSRVNRQSVL AITSAQQRLKLYN+VPPNGLVLYTGT+V +DGKEKKVTIDFEPF+PINASLYLCDNKFHTEALNELLESD +FGFIVMDGNGTLFGTLSGNT Sbjct: 1 MGDKNDDDKNIEIWKIKKLIKSLEAARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASNIKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVNEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNT 164
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1Y_ARATH (Eukaryotic peptide chain release factor subunit 1-2 OS=Arabidopsis thaliana GN=ERF1-2 PE=2 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 9.022e-80 Identity = 146/160 (91.25%), Postives = 153/160 (95.62%), Query Frame = 2 Query: 227 QETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNT 706 +E D NIEIWKIKKLIK LESARGNGTSMISLIMPPRDQ+SRVTKMLGDE+GTASNIKSRVNRQSVL+AITSAQQRLKLYNKVP NGLVLYTGT+V DDGKEKKVT DFEPF+PINASLYLCDNKFHTEALNELLESD +FGFIVMDGNGTLFGTLSGNT Sbjct: 3 EEADTNIEIWKIKKLIKGLESARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASNIKSRVNRQSVLSAITSAQQRLKLYNKVPTNGLVLYTGTIVNDDGKEKKVTFDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNT 162
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_PODAN (Eukaryotic peptide chain release factor subunit 1 OS=Podospora anserina GN=SU2 PE=3 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 3.108e-72 Identity = 134/166 (80.72%), Postives = 148/166 (89.16%), Query Frame = 2 Query: 215 MSD--GQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNT 706 MSD E +KNIEIWK+KKLIK LE+ARGNGTSMISLI+PP+DQISR KML +E+GTASNIKSRVNRQSVL+AITS QQRLKLYNKVPPNGLV+Y G ++T +GKE+KV IDFEPFKPIN SLYLCDNKFHTEAL ELLESD +FGFIVMDGNG LFGTLSGNT Sbjct: 1 MSDPNANEAEKNIEIWKVKKLIKRLEAARGNGTSMISLIIPPKDQISRAAKMLAEEYGTASNIKSRVNRQSVLSAITSTQQRLKLYNKVPPNGLVVYCGEILTSEGKERKVNIDFEPFKPINTSLYLCDNKFHTEALAELLESDQKFGFIVMDGNGALFGTLSGNT 166
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_POLMI (Eukaryotic peptide chain release factor subunit 1 OS=Polyandrocarpa misakiensis GN=ERF1 PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 4.059e-72 Identity = 131/157 (83.44%), Postives = 142/157 (90.45%), Query Frame = 2 Query: 236 DKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNT 706 D+N+EIWKIKKLIK+LE+ARGNGTSMISLI+PP+DQ+SRV KML DEFGTASNIKSRVNR SVL AITS QQRLKLYNKVPPNGLV+Y GT+VTD+GKEKKV IDFEPFKPIN SLYLCDNKFHTEAL LL D +FGFIVMDGNG LFGTL GNT Sbjct: 9 DRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQVSRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDNKFGFIVMDGNGALFGTLQGNT 165
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_XENTR (Eukaryotic peptide chain release factor subunit 1 OS=Xenopus tropicalis GN=etf1 PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.488e-71 Identity = 130/162 (80.25%), Postives = 143/162 (88.27%), Query Frame = 2 Query: 221 DGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNT 706 D D+N+EIWKIKKLIK+LE+ARGNGTSMISLI+PP+DQISRV KML DEFGTASNIKSRVNR SVL AITS QQRLKLYNKVPPNGLV+Y GT+VT++GKEKKV IDFEPFKPIN SLYLCDNKFHTEAL LL D +FGFIV+DG+G LFGTL GNT Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNT 165
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_XENLA (Eukaryotic peptide chain release factor subunit 1 OS=Xenopus laevis GN=etf1 PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.488e-71 Identity = 130/162 (80.25%), Postives = 143/162 (88.27%), Query Frame = 2 Query: 221 DGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNT 706 D D+N+EIWKIKKLIK+LE+ARGNGTSMISLI+PP+DQISRV KML DEFGTASNIKSRVNR SVL AITS QQRLKLYNKVPPNGLV+Y GT+VT++GKEKKV IDFEPFKPIN SLYLCDNKFHTEAL LL D +FGFIV+DG+G LFGTL GNT Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNT 165
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_RAT (Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus GN=Etf1 PE=2 SV=3) HSP 1 Score: 267.7 bits (683), Expect = 4.488e-71 Identity = 130/162 (80.25%), Postives = 143/162 (88.27%), Query Frame = 2 Query: 221 DGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNT 706 D D+N+EIWKIKKLIK+LE+ARGNGTSMISLI+PP+DQISRV KML DEFGTASNIKSRVNR SVL AITS QQRLKLYNKVPPNGLV+Y GT+VT++GKEKKV IDFEPFKPIN SLYLCDNKFHTEAL LL D +FGFIV+DG+G LFGTL GNT Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNT 165
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_RABIT (Eukaryotic peptide chain release factor subunit 1 OS=Oryctolagus cuniculus GN=ETF1 PE=2 SV=3) HSP 1 Score: 267.7 bits (683), Expect = 4.488e-71 Identity = 130/162 (80.25%), Postives = 143/162 (88.27%), Query Frame = 2 Query: 221 DGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNT 706 D D+N+EIWKIKKLIK+LE+ARGNGTSMISLI+PP+DQISRV KML DEFGTASNIKSRVNR SVL AITS QQRLKLYNKVPPNGLV+Y GT+VT++GKEKKV IDFEPFKPIN SLYLCDNKFHTEAL LL D +FGFIV+DG+G LFGTL GNT Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNT 165
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_PONAB (Eukaryotic peptide chain release factor subunit 1 OS=Pongo abelii GN=ETF1 PE=2 SV=3) HSP 1 Score: 267.7 bits (683), Expect = 4.488e-71 Identity = 130/162 (80.25%), Postives = 143/162 (88.27%), Query Frame = 2 Query: 221 DGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNT 706 D D+N+EIWKIKKLIK+LE+ARGNGTSMISLI+PP+DQISRV KML DEFGTASNIKSRVNR SVL AITS QQRLKLYNKVPPNGLV+Y GT+VT++GKEKKV IDFEPFKPIN SLYLCDNKFHTEAL LL D +FGFIV+DG+G LFGTL GNT Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNT 165 The following BLAST results are available for this feature:
BLAST of FC920208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920208 ID=FC920208; Name=FC920208; organism=Citrus clementina; type=EST; length=724bpback to top |