FC920310
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920310 vs. ExPASy Swiss-Prot
Match: RM21_ARATH (50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana GN=RPL21M PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 8.617e-39 Identity = 97/207 (46.86%), Postives = 118/207 (57.00%), Query Frame = 1 Query: 64 MAHRRCLHVLSRHAAALLSLKTPPTLPFSTSISLKGL-----TPFQHRSLISSTLGPTNW--SHYRHFSSNKNXXXXXXXXXXXXXXXXXXXXXXXXXXIGDTVPDLGREYTLEEKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVV 663 MA RC LSR A + S+ ++ I G T +RSL + ++W S R FSSN ++ REY+ EK EA EIGYKV+GPL+ S+R+FK YEP FA+VQIGSHQFKVSNGDSIFTE+LKFC++NDKL L KVLLLGS QTIIGRP++PDA VHAVV Sbjct: 1 MASLRCFRELSRRATTVFSINQTRSISSFHGIEFSGTSISHGTVIPNRSLTRNLPWYSHWYRSQDRCFSSNTKDTDEDEESSEGEDDDEEEGEDFED----SADMEVEREYSPAEKVEEAEEIGYKVMGPLKPSERLFKPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKLELTKVLLLGSASQTIIGRPILPDATVHAVV 203
BLAST of FC920310 vs. ExPASy Swiss-Prot
Match: RK21_SPIOL (50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea GN=RPL21 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.122e-13 Identity = 39/66 (59.09%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 466 EPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVV 663 E FAVV IGS Q+ V G I+T+RLK VNDK++LNKVLL+G++ T IG P+V +AAVHAVV Sbjct: 121 EEIFAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIVLNKVLLVGTKASTYIGTPIVTNAAVHAVV 186
BLAST of FC920310 vs. ExPASy Swiss-Prot
Match: RK21_ARATH (50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana GN=RPL21 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.385e-12 Identity = 38/93 (40.86%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 385 EKEAEAAEIGYKVLGPLRKSDRVFKKYEPAFAVVQIGSHQFKVSNGDSIFTERLKFCEVNDKLILNKVLLLGSQHQTIIGRPMVPDAAVHAVV 663 E E E +I V+ + + K E FAV+ +G Q+ V G ++T+RLK V+D+++LNKVLL+G++ T IG+P+V +A VHAVV Sbjct: 71 EAEPETTDIEAVVVSDVSEVTEEKAKREEIFAVIMVGGRQYIVFPGRYLYTQRLKDANVDDQIVLNKVLLVGTKTHTYIGKPVVTNATVHAVV 163 The following BLAST results are available for this feature:
BLAST of FC920310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920310 ID=FC920310; Name=FC920310; organism=Citrus clementina; type=EST; length=663bpback to top |