FC920323

Overview
NameFC920323
Unique NameFC920323
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length655
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14439 contig Ccv1_Contig14439:34..688. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 4.956e-55
Identity = 104/161 (64.60%), Postives = 123/161 (76.40%), Query Frame = 2
Query:  179 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            M+H ETGCQ P EGPILCINNCGFFGS ATMNMCSKC+K++++KQ+QAKLAASSI SIVN     +G E + A   +V  + VE K +  QP+  +  SE V   PK  EGP+RCS+C+KRVGLTGF CRCGNLYC  HRYSD+H+C FDYRTAARDAI K
Sbjct:    1 MEHKETGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVN--GGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAK 158          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 4.956e-55
Identity = 104/161 (64.60%), Postives = 123/161 (76.40%), Query Frame = 2
Query:  179 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPK--EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            M+H ETGCQ P EGPILCINNCGFFGS ATMNMCSKC+K++++KQ+QAKLAASSI SIVN     +G E + A   +V  + VE K +  QP+  +  SE V   PK  EGP+RCS+C+KRVGLTGF CRCGNLYC  HRYSD+H+C FDYRTAARDAI K
Sbjct:    1 MEHKETGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVN--GGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAK 158          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP4_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 7.912e-53
Identity = 99/161 (61.49%), Postives = 119/161 (73.91%), Query Frame = 2
Query:  179 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKP--KEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            M+H E GCQ P EGPILCINNCGFFGS ATMNMCSKC+K++++K++QAKLAASSI SIVN           A+ +  V  + VE K + VQP+  +  SE V   P  KEGP+RC++C+KRVGLTGF CRCGN+YC  HRYSD+H C FDYRTAARDAI K
Sbjct:    1 MEHKEAGCQQP-EGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVNGCDGGKEHIVAASGSTAVAVAQVEAKTLVVQPTDVAGTSEEVAVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAK 160          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 3.675e-50
Identity = 92/162 (56.79%), Postives = 120/162 (74.07%), Query Frame = 2
Query:  179 MDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESV---EAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            MDHD+TGCQ+PPEGP LC NNCGFFGS ATMNMCSKC+KD++ +Q+Q    AS++      +SS+   E+  AA VD++  SVEP  +SVQPS    ++E V   EA   +GPSRC++C KRVGLTGFKCRCG+L+C +HRY+D H+C F+Y  AA++AI K
Sbjct:    1 MDHDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSG--TSSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKGPSRCTTCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAK 160          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.206e-30
Identity = 64/156 (41.03%), Postives = 88/156 (56.41%), Query Frame = 2
Query:  188 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            +E  C+ P EG  LC+NNCGFFGS ATMN+CS CY D+ LKQ Q     S++ S ++   +       A   +     + E K I +            +  P + P+RC+ C+KRVGLTGF CRCG  +C SHRY + H C FD+++A R+ I K
Sbjct:    3 EEHRCETP-EGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLSPVIAPVLENYAAELEIPTTKKTEEKKPIQIPTE---------QPSPPQRPNRCTVCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAK 148          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 9.412e-30
Identity = 71/164 (43.29%), Postives = 101/164 (61.59%), Query Frame = 2
Query:  188 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSE--------SVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            +E  CQ P E   LC+NNCGF GS ATMN+CS CY D+ LKQ Q    +SSI S V E+S S    S +++ +   +S + P ++   PS   E+ E        + E   ++ P+RC++C+KRVGLTGFKCRCG ++C  HRY + H C +D+++A R+ I K
Sbjct:    3 EEHRCQTP-ESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQ---SSSIKSTV-ESSLSVSPPSSSSSEI---SSPIIPPLLK-NPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAK 157          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP9_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Oryza sativa subsp. japonica GN=SAP9 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.229e-29
Identity = 65/148 (43.92%), Postives = 88/148 (59.46%), Query Frame = 2
Query:  212 PEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            PE PILC+NNCGFFGS  T NMCSKCY+D +       +AA  +       +SS+ +    A   +V A++VE K  + +P             PK   +RC SC+K+VGLTGF+CRCG  +C +HRY++ H+C FDY+ A RD I K
Sbjct:   17 PEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---KVTTMAAPVVEKKAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEP-------------PKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAK 148          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP7_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Arabidopsis thaliana GN=SAP7 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.671e-29
Identity = 58/152 (38.16%), Postives = 95/152 (62.50%), Query Frame = 2
Query:  209 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSC---ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            PP  P LC N CGFFGS + MN+CSKCY+ +  ++DQ  +A +++ + +   S S  +       ++++ + +E  +++ +PS    A+E  E+  ++P    +RC SC K+VG+ GFKC+CG+ +C SHRY ++H C FD++   RDAI K
Sbjct:   12 PPTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLKLPSCSIIAPG-QKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAK 162          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.165e-28
Identity = 65/156 (41.67%), Postives = 84/156 (53.85%), Query Frame = 2
Query:  188 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            +ETG   P E PILC+NNCGFFGS  T NMCSKCY+D +         A ++ ++V +   ++ S +     V    S           S A       E  PK   +RC SC+K+VGLTGFKCRCG  +C  HRY+D H C FDY+   R+ I K
Sbjct:   11 EETGVHTP-EAPILCVNNCGFFGSRMTENMCSKCYRDTV--------KAKTVATVVEKKPLASLSSTPLVTEVTDGGSG----------SVADGKQVMEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAK 147          
BLAST of FC920323 vs. ExPASy Swiss-Prot
Match: SAP1_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Arabidopsis thaliana GN=SAP1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.563e-27
Identity = 58/148 (39.19%), Postives = 80/148 (54.05%), Query Frame = 2
Query:  212 PEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDQHNCPFDYRTAARDAIIK 655
            P  P LC+  CGFFGS + MN+CSKCY+DI   ++Q   A +++   +N        +     T  V  S           S A+ L       PK   +RC SC K+VG+TGFKCRCG+ +C +HRY + H C FD++  AR+AI K
Sbjct:   13 PSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPNKPKTQPQQSQEITQGVLGSGSSSSSTRGGDSAAAPLDP-----PKSTATRCLSCNKKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAK 155          
The following BLAST results are available for this feature:
BLAST of FC920323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
SAP8_ORYSJ4.956e-5564.60Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI4.956e-5564.60Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ORYSJ7.912e-5361.49Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ARATH3.675e-5056.79Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ARATH7.206e-3041.03Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH9.412e-3043.29Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ORYSJ1.229e-2943.92Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ARATH4.671e-2938.16Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ5.165e-2841.67Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ARATH2.563e-2739.19Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionC32006H02EF RVDevelop1 Citrus clementina cDNA clone C32006H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920323 ID=FC920323; Name=FC920323; organism=Citrus clementina; type=EST; length=655bp
CGGGGGACACCCGGAAAGGGAAACGACGACGTCTCTAATCGGTTTTTGCC
TGCTCTCTCCCCGTAGGCCGATCTGGTCCATTTAATTTTAGGGGCTCATT
GGATGCTGGCTTGAGCTCGGGGATCGGCTTAAGGGATTCATTGCTGTTTC
TTCTGTTGCTCGCAGGGGTGGTGAAAACATGGACCATGATGAGACTGGAT
GCCAAGCTCCTCCTGAGGGCCCTATCTTGTGCATCAACAATTGTGGTTTC
TTTGGAAGTGTGGCTACTATGAATATGTGTTCCAAATGCTACAAGGATAT
AATGCTGAAACAGGATCAAGCTAAGCTTGCTGCTTCATCTATTGGAAGCA
TTGTGAATGAAACGTCAAGCAGCAATGGAAGTGAATCTGTTGCTGCTGCC
ACTGTTGATGTGCAAGCTAGTTCAGTGGAGCCAAAAATCATCTCTGTGCA
GCCATCATGTGCTTCAGAATTGAGCGAGAGTGTGGAGGCAAAGCCGAAGG
AGGGTCCCAGCCGGTGCAGCAGTTGCAAGAAGCGTGTTGGTTTAACAGGA
TTCAAATGTCGCTGTGGTAACTTATACTGTGTGTCACATCGCTATTCGGA
CCAACATAACTGCCCCTTTGACTACCGCACTGCTGCTAGGGATGCTATAA
TTAAA
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