FC920351
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920351 vs. ExPASy Swiss-Prot
Match: VPS4_DICDI (Vacuolar protein sorting-associated protein 4 OS=Dictyostelium discoideum GN=vps4 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.102e-20 Identity = 55/136 (40.44%), Postives = 76/136 (55.88%), Query Frame = 3 Query: 279 NFKEQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAEEIRAVLDDG-GPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNXKWNDVAGL 683 NF ++AI+ V+QA ++DNA NYA+A LY+ +LE+F T LKYEK+ + K I K EYL+RAE+++ LD P G + DPE K L+S+I+ KPN KW+DVAGL Sbjct: 5 NFLQKAIQIVQQATEQDNAKNYAEAHRLYIQSLEWFTTALKYEKSERSKATIKAKTLEYLQRAEQLKEYLDKSKNKKPVAVGGNKSNSAGSANGAGKSAKEDDEDMDPEDKKRNDSLSSSIVTTKPNVKWDDVAGL 140
BLAST of FC920351 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.028e-19 Identity = 54/136 (39.71%), Postives = 73/136 (53.68%), Query Frame = 3 Query: 279 NFKEQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAEEIRAVLDDGGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNXKWNDVAGLK 686 +F + IE V++A+ D A Y +A+ Y N L+Y LKYEKNPK K+ I KFTEYL RAE+++ L+ A +A + K + KLR L+SAI+ EKPN KW DVAGL+ Sbjct: 5 DFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAKFTEYLNRAEQLKKHLESEEANAAKKSPSA-GSGSNGGNKKISQEEGEDNGGEDNKKLRGALSSAILSEKPNVKWEDVAGLE 139
BLAST of FC920351 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18 Identity = 53/137 (38.69%), Postives = 71/137 (51.82%), Query Frame = 3 Query: 291 QAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAEEIRAVLDD-----GGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNXKWNDVAGLK 686 +AI VK A+ DNA Y A+ Y +AL+YF LKYEKN K KE I K EYL RAE+++ L + NG+ + P D + KLR+ L SAI+ EKPN +W+D+AGL+ Sbjct: 9 KAISLVKTAIDNDNAEQYPDAYKYYQSALDYFMMALKYEKNEKSKEIIRSKVIEYLDRAEKLKVYLQEKNNQISSKSRVSNGNVEGSNSPTANEAL----------DSDAKKLRSALTSAILVEKPNVRWDDIAGLE 135
BLAST of FC920351 vs. ExPASy Swiss-Prot
Match: VPS4B_BOVIN (Vacuolar protein sorting-associated protein 4B OS=Bos taurus GN=VPS4B PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.662e-17 Identity = 54/137 (39.42%), Postives = 77/137 (56.20%), Query Frame = 3 Query: 288 EQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYE-KNPKIKEAITQKFTEYLRRAEEIRAVL---DDGGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNXKWNDVAGLK 686 ++AI+ +A QED AGNY +A LY +A++YF +KYE + K K++I K TEYL RAE+++ L + P G A A K +DPE+ KL+ L AI+ E+PN KW+DVAGL+ Sbjct: 9 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKKREKKPQKPVKEGQPAPADE-----KGNDSDGEGESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLE 140
BLAST of FC920351 vs. ExPASy Swiss-Prot
Match: VPS4B_HUMAN (Vacuolar protein sorting-associated protein 4B OS=Homo sapiens GN=VPS4B PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17 Identity = 53/137 (38.69%), Postives = 77/137 (56.20%), Query Frame = 3 Query: 288 EQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYE-KNPKIKEAITQKFTEYLRRAEEIRAVL---DDGGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNXKWNDVAGLK 686 ++AI+ +A QED AGNY +A LY +A++YF +KYE + K K++I K TEYL RAE+++ L + P G + A K +DPE+ KL+ L AI+ E+PN KW+DVAGL+ Sbjct: 9 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADE-----KGNDSDGEGESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLE 140
BLAST of FC920351 vs. ExPASy Swiss-Prot
Match: VPS4B_PONAB (Vacuolar protein sorting-associated protein 4B OS=Pongo abelii GN=VPS4B PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17 Identity = 52/137 (37.96%), Postives = 77/137 (56.20%), Query Frame = 3 Query: 288 EQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYE-KNPKIKEAITQKFTEYLRRAEEIRAVL---DDGGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNXKWNDVAGLK 686 ++AI+ +A QED AGNY +A LY +A++YF +KYE + K K++I + TEYL RAE+++ L + P G + A K +DPE+ KL+ L AI+ E+PN KW+DVAGL+ Sbjct: 9 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAQCTEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADE-----KGNDSDGEGESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLE 140
BLAST of FC920351 vs. ExPASy Swiss-Prot
Match: VPS4B_MOUSE (Vacuolar protein sorting-associated protein 4B OS=Mus musculus GN=Vps4b PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.837e-16 Identity = 51/134 (38.06%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 288 EQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYE-KNPKIKEAITQKFTEYLRRAEEIRAVLDDGGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNXKWNDVAGLK 686 ++AI+ +A QED AGNY +A LY +A++YF +KYE + K K++I K TEYL RAE+++ L P K +DPE+ KL+ L AI+ E+PN KW+DVAGL+ Sbjct: 9 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKKKEKKP--QKPVKEEQSGPVDEKGNDSDGEAESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLE 140
BLAST of FC920351 vs. ExPASy Swiss-Prot
Match: VPS4A_RAT (Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus GN=Vps4a PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15 Identity = 50/140 (35.71%), Postives = 80/140 (57.14%), Query Frame = 3 Query: 270 MYSNFKEQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYE-KNPKIKEAITQKFTEYLRRAEEIRAVLDDGGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNXKWNDVAGLK 686 M ++ ++AI+ V +A +ED A NY +A LY +A+EYF +KYE + K KE+I K +YL RAE+++ L + +G V + + + ++PE+ KL+ L A++ EKPN +WNDVAGL+ Sbjct: 1 MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCMQYLDRAEKLKDYLRN----KEKHGKKPV---KENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLE 133
BLAST of FC920351 vs. ExPASy Swiss-Prot
Match: VPS4A_MOUSE (Vacuolar protein sorting-associated protein 4A OS=Mus musculus GN=Vps4a PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15 Identity = 50/140 (35.71%), Postives = 80/140 (57.14%), Query Frame = 3 Query: 270 MYSNFKEQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYE-KNPKIKEAITQKFTEYLRRAEEIRAVLDDGGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNXKWNDVAGLK 686 M ++ ++AI+ V +A +ED A NY +A LY +A+EYF +KYE + K KE+I K +YL RAE+++ L + +G V + + + ++PE+ KL+ L A++ EKPN +WNDVAGL+ Sbjct: 1 MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCMQYLDRAEKLKDYLRN----KEKHGKKPV---KENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLE 133
BLAST of FC920351 vs. ExPASy Swiss-Prot
Match: VPS4A_HUMAN (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15 Identity = 50/143 (34.97%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 270 MYSNFKEQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYE-KNPKIKEAITQKFTEYLRRAEEIRAVL---DDGGPGPAHNGDAAVATRPKTKPKXXXXXXXXXXEDPEQAKLRAGLNSAIIREKPNXKWNDVAGLK 686 M ++ ++AI+ V +A +ED A NY +A LY +A+EYF +KYE + K KE+I K +YL RAE+++ L + G P + + + ++PE+ KL+ L A++ EKPN +WNDVAGL+ Sbjct: 1 MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCVQYLDRAEKLKDYLRSKEKHGKKPV----------KENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLE 133 The following BLAST results are available for this feature:
BLAST of FC920351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920351 ID=FC920351; Name=FC920351; organism=Citrus clementina; type=EST; length=723bpback to top |