FC920472
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920472 vs. ExPASy Swiss-Prot
Match: PORA_CUCSA (Protochlorophyllide reductase, chloroplastic OS=Cucumis sativus GN=PORA PE=2 SV=1) HSP 1 Score: 338.191 bits (866), Expect = 2.682e-92 Identity = 168/215 (78.14%), Postives = 185/215 (86.05%), Query Frame = 2 Query: 77 VPSAFSVPKEGKTSASFKDSSLFGVSFSEHAKADFSSSALRCKREFSQRNGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKASDYPSKRLII 721 V A S+PKEGK+S KDSSLFG+SFS+H K++FSSS LRCKRE +Q+ G +RAQT AT SPAV+ ++P GKKTLRKGSV+ITGASSGLGLATAKALAETGKWH+IMACRDFLKAERAAKSAG+ KENYT+MHLDLASLDSVRQFVD FR+SGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHF S YPSKRLII Sbjct: 9 VSPALSIPKEGKSSVCLKDSSLFGISFSDHLKSEFSSSTLRCKRELNQQIGAIRAQTTATESPAVNKATPDGKKTLRKGSVVITGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKSAGITKENYTVMHLDLASLDSVRQFVDNFRQSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFLLSRLLLEDLNKSSYPSKRLII 223
BLAST of FC920472 vs. ExPASy Swiss-Prot
Match: POR_PEA (Protochlorophyllide reductase, chloroplastic OS=Pisum sativum GN=3PCR PE=1 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 4.586e-84 Identity = 160/216 (74.07%), Postives = 182/216 (84.26%), Query Frame = 2 Query: 77 VPSAFSVPKEGKTSASFKDSSLFGVS-FSEHAKADFSSSALRCKREFSQRNGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKASDYPSKRLII 721 +P++FS+PKEGK AS KDS+LFGVS S+ K DF+SSALRCK E Q+ G VRA+T A A+PAV+ SS +GKKTLRKG+V+ITGASSGLGLATAKALAE+GKWH+IMACRD+LKA RAAKSAG+AKENYTIMHLDLASLDSVRQFVD FRRS PLDVL+ NAAVY PTAKEP+FTA+GFE+SVGTNHLGHF K SDYPSKRLII Sbjct: 9 LPASFSIPKEGKIGASLKDSTLFGVSSLSDSLKGDFTSSALRCK-ELRQKVGAVRAETAAPATPAVNKSSSEGKKTLRKGNVVITGASSGLGLATAKALAESGKWHVIMACRDYLKAARAAKSAGLAKENYTIMHLDLASLDSVRQFVDNFRRSEMPLDVLINNAAVYFPTAKEPSFTADGFEISVGTNHLGHFLLSRLLLEDLKKSDYPSKRLII 223
BLAST of FC920472 vs. ExPASy Swiss-Prot
Match: PORA_ARATH (Protochlorophyllide reductase A, chloroplastic OS=Arabidopsis thaliana GN=PORA PE=2 SV=2) HSP 1 Score: 306.99 bits (785), Expect = 6.622e-83 Identity = 161/221 (72.85%), Postives = 182/221 (82.35%), Query Frame = 2 Query: 77 VPSAFSVPKEGK----TSASFKDSSLFGVSFSEHAKADFSSSALRCKREFSQRNG--VVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKASDYPSKRLII 721 V SAFSV K+GK S+SFK+SSLFGVS SE +KADF SS+LRCKRE S RN ++RAQ +AT++P+V SS KKTLRKG+V++TGASSGLGLATAKALAETGKWH+IMACRDFLKAERAA+SAGM K++YT+MHLDLASLDSVRQFVD FRR+ PLDVLVCNAAVY PTA +PTFTAEGFELSVG NHLGHF K SDYPSKRLII Sbjct: 9 VSSAFSVRKDGKLNASASSSFKESSLFGVSLSEQSKADFVSSSLRCKREQSLRNNKAIIRAQAIATSTPSVTKSSLDRKKTLRKGNVVVTGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAQSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRAEMPLDVLVCNAAVYQPTANQPTFTAEGFELSVGINHLGHFLLSRLLIDDLKNSDYPSKRLII 229
BLAST of FC920472 vs. ExPASy Swiss-Prot
Match: POR_DAUCA (Protochlorophyllide reductase, chloroplastic OS=Daucus carota GN=POR1 PE=2 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 4.746e-81 Identity = 157/217 (72.35%), Postives = 181/217 (83.41%), Query Frame = 2 Query: 77 VPSAFSVPKEGKTSASFKDSSLFGVSFSEHAKADFSSSALRCKREFSQ--RNGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKASDYPSKRLII 721 +PS+FS+ KEGK + S K++SLFGV+FS+ + DFSS LR +R Q + G +R+Q +AT +P+V+ ++ +GKKTLRKGSVIITGASSGLGLATAKALAETGKWH+IMACRDFLKAERAAKSAGM KENYTIMHLDLASLDSVRQFV+TFRRS RPLDVLVCNAAVY PTAKEPT+TA+GFELSVGTNHLGHF SDYPSKRLII Sbjct: 9 LPSSFSINKEGKANVSLKETSLFGVTFSDSLRTDFSS--LRTRRGCRQISQTGAIRSQAVAT-TPSVNRATGEGKKTLRKGSVIITGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKSAGMPKENYTIMHLDLASLDSVRQFVETFRRSERPLDVLVCNAAVYFPTAKEPTYTADGFELSVGTNHLGHFLLSRLLLDDLNKSDYPSKRLII 222
BLAST of FC920472 vs. ExPASy Swiss-Prot
Match: PORB_ARATH (Protochlorophyllide reductase B, chloroplastic OS=Arabidopsis thaliana GN=PORB PE=1 SV=3) HSP 1 Score: 295.049 bits (754), Expect = 2.604e-79 Identity = 155/218 (71.10%), Postives = 176/218 (80.73%), Query Frame = 2 Query: 77 VPSAFSVPKEGK---TSASFKDSSLFGVSFSEHAKADFSSSALRCKREFSQRNGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKASDYPSKRLII 721 V SAFSV K+ K +S+SFKDSSLFG S ++ K++ SS+LR KRE S RN +RAQT AT+SP V S GKKTLRKG+V++TGASSGLGLATAKALAETGKW++IMACRDFLKAERAAKS GM K++YT+MHLDLASLDSVRQFVD FRR+ PLDVLVCNAAVY PTAKEPT++AEGFELSV TNHLGHF K SDYPSKRLII Sbjct: 9 VSSAFSVRKDAKLNASSSSFKDSSLFGASITDQIKSEHGSSSLRFKREQSLRNLAIRAQTAATSSPTV-TKSVDGKKTLRKGNVVVTGASSGLGLATAKALAETGKWNVIMACRDFLKAERAAKSVGMPKDSYTVMHLDLASLDSVRQFVDNFRRTETPLDVLVCNAAVYFPTAKEPTYSAEGFELSVATNHLGHFLLARLLLDDLKKSDYPSKRLII 225
BLAST of FC920472 vs. ExPASy Swiss-Prot
Match: PORC_ARATH (Protochlorophyllide reductase C, chloroplastic OS=Arabidopsis thaliana GN=PORC PE=1 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 8.971e-72 Identity = 137/218 (62.84%), Postives = 173/218 (79.36%), Query Frame = 2 Query: 77 VPSAFSVPKEGKTSASFKDSSLFGVSFSEHAKADFSSSALRCKREFSQR---NGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKASDYPSKRLII 721 +PS S+ KEGK +AS K+++ G SFS H +A+ S+ L K + Q+ + +RAQT+ TA+P + +SP+ KKT RKG+ +ITGASSGLGLATAKALA+TGKWH+IMACR+FLKAE+AA+S GM+KE+YT+MHLDLASL+SV+QFV+ FRR+ +PLDVLVCNAAVY PTAKEP+FTAEGFE+SVGTNHLGHF K SDYPSKR+II Sbjct: 10 LPSTISIQKEGKFNASLKETTFTGSSFSNHLRAEKISTLLTIKEQRRQKPRFSTGIRAQTV-TATPPANEASPEQKKTERKGTAVITGASSGLGLATAKALADTGKWHVIMACRNFLKAEKAARSVGMSKEDYTVMHLDLASLESVKQFVENFRRTEQPLDVLVCNAAVYQPTAKEPSFTAEGFEISVGTNHLGHFLLSRLLLDDLKKSDYPSKRMII 226
BLAST of FC920472 vs. ExPASy Swiss-Prot
Match: PORB_HORVU (Protochlorophyllide reductase B, chloroplastic OS=Hordeum vulgare GN=PORB PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.528e-66 Identity = 132/215 (61.40%), Postives = 158/215 (73.49%), Query Frame = 2 Query: 77 VPSAFSVPKEGKTSASFKDSSLFGVSFSEHAKADFSSSALRCKREFSQRNGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKASDYPSKRLII 721 +PSA S KEG KDS+ FGV ++ K D +S LR KR + + +RAQ A ++P +SP GKKT+R G+ IITGASSGLGLATAKALAE+GKWH+IMACRD+LK RAA++AGM K +YTI+HLDLASLDSVRQFV R+ P+DV+VCNAAVY PTAKEP+FTA+GFE+SVG NHLGHF KASDYPSKRLII Sbjct: 10 LPSALSARKEGAA----KDSAFFGVRLADGLKLDATSLGLRTKR-VNTSSVAIRAQAAAVSAPTATPASPAGKKTVRTGNAIITGASSGLGLATAKALAESGKWHVIMACRDYLKTARAARAAGMPKGSYTIVHLDLASLDSVRQFVKNVRQLDMPIDVVVCNAAVYQPTAKEPSFTADGFEMSVGVNHLGHFLLARELLEDLKASDYPSKRLII 219
BLAST of FC920472 vs. ExPASy Swiss-Prot
Match: PORB_ORYSJ (Protochlorophyllide reductase B, chloroplastic OS=Oryza sativa subsp. japonica GN=PORB PE=2 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.651e-65 Identity = 132/216 (61.11%), Postives = 159/216 (73.61%), Query Frame = 2 Query: 77 VPSAFSVPKEGKTSASFKDSSLFGVSFSEHAKADFSSSALRCKREFSQRNGVVRAQ-TMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKASDYPSKRLII 721 +PSA S KEG + KDS+ GV + K + S+ LR KR S + +RAQ + A +SP V +SP GK+TLRKG+ +ITGASSGLGLATAKALAETG+WH++M CRDFLKA RAAK+AGM K +YTI+HLDLASLDSVRQFV RR P+DV+VCNAAVY PTAK+P+FTA+GFE+SVG NHLGHF +SDYPSKRLII Sbjct: 12 LPSALSARKEG----AVKDSAFLGVRLGDGLKLETSALGLRTKR-VSTSSVAIRAQASAAVSSPTVTPASPSGKQTLRKGTAVITGASSGLGLATAKALAETGRWHVVMGCRDFLKASRAAKAAGMEKGSYTIVHLDLASLDSVRQFVANVRRLEMPVDVVVCNAAVYQPTAKQPSFTADGFEMSVGVNHLGHFLLARELLADLTSSDYPSKRLII 222
BLAST of FC920472 vs. ExPASy Swiss-Prot
Match: PORA_ORYSJ (Protochlorophyllide reductase A, chloroplastic OS=Oryza sativa subsp. japonica GN=PORA PE=2 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 4.036e-64 Identity = 130/215 (60.47%), Postives = 148/215 (68.84%), Query Frame = 2 Query: 77 VPSAFSVPKEGKTSASFKDSSLFGVSFSEHAKADFSSSALRCKREFSQRNGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKASDYPSKRLII 721 +PSA SVPK+G SA K+ VS KA S +R V ASP S GKKTLR+G V+ITGASSGLGLA AKALAETGKWH++MACRDFLKA AAK+AGMA +YT+MHLDLASLDSVRQFVD FRRSG PLD LVCNAA+Y PTA++PTFTA+G+E+SVG NHLGHF K SDYPS+RLII Sbjct: 10 LPSALSVPKKGNLSAVVKEPGFLSVS----QKAKKPSLVVRA----------VATPAAPVASPGAGTSKADGKKTLRQGVVVITGASSGLGLAAAKALAETGKWHVVMACRDFLKAATAAKAAGMAAGSYTVMHLDLASLDSVRQFVDNFRRSGMPLDALVCNAAIYRPTARQPTFTADGYEMSVGVNHLGHFLLARLMLDDLKKSDYPSRRLII 210
BLAST of FC920472 vs. ExPASy Swiss-Prot
Match: PORA_HORVU (Protochlorophyllide reductase A, chloroplastic OS=Hordeum vulgare GN=PORA PE=1 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.174e-63 Identity = 130/218 (59.63%), Postives = 159/218 (72.94%), Query Frame = 2 Query: 77 VPSAFSVPKEGKT--SASFKDSSLF-GVSFSEHAKADFSSSALRCKREFSQRNGVVRAQTMATASPAVDVSSPQGKKTLRKGSVIITGASSGLGLATAKALAETGKWHIIMACRDFLKAERAAKSAGMAKENYTIMHLDLASLDSVRQFVDTFRRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFXXXXXXXXXXKASDYPSKRLII 721 +PS SVPK+G + + + KD++ F GVS +KA +S A+R + V A + T SP SSP GKKTLR+G V+ITGASSGLGLA AKALAETGKWH++MACRDFLKA +AAK+AGMA +YT+MHLDLASLDSVRQFVD FRR+ PLDVLVCNAA+Y PTA+ PTFTA+G E+SVG NHLGHF + SDYPS+R++I Sbjct: 6 LPSTLSVPKKGSSMGAVAVKDTAAFLGVS----SKAKKASLAVRTQ--------VATAPSPVTTSPGSTASSPSGKKTLRQGVVVITGASSGLGLAAAKALAETGKWHVVMACRDFLKASKAAKAAGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAAIYRPTARTPTFTADGHEMSVGVNHLGHFLLARLLMEDLQKSDYPSRRMVI 211 The following BLAST results are available for this feature:
BLAST of FC920472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920472 ID=FC920472; Name=FC920472; organism=Citrus clementina; type=EST; length=722bpback to top |