FC920499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_ARATH (Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana GN=PSAF PE=1 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.932e-63 Identity = 127/191 (66.49%), Postives = 139/191 (72.77%), Query Frame = 2 Query: 89 MSLTIPTNLSKPLLKPRSNSQLSHA-KLSKQMITCXXXXXXXXXXXXXXXXXXPLQAFXXXXXXXXXXXXXPQPAVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKP 658 MSLTIP NL +L PRSN L+ + S C ++AF P PAVADISGLTPCK+SKQFAKREKQQ+KKLESS KLYAP+SAPALA+ A +EKTKRRFDNYGKYGLLCGSDGLPHLIV+GDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIAISGEKKP Sbjct: 1 MSLTIPANL---VLNPRSNKSLTQSVPKSSARFVCSDDKSSSSTPQS-------MKAFSAAVALSSILLSAPMPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALALNAQIEKTKRRFDNYGKYGLLCGSDGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAISGEKKP 181
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_SPIOL (Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea GN=PSAF PE=1 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.060e-61 Identity = 126/191 (65.97%), Postives = 134/191 (70.16%), Query Frame = 2 Query: 89 MSLTIPTNLSKPLL-KPRSNSQLSHAKLSKQMITCXXXXXXXXXXXXXXXXXXPLQAFXXXXXXXXXXXXXPQPAVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKP 658 MS TIPTNL KPL KP+ S S A SK + A P A+ADI+GLTPCKESKQFAKREKQ LKKL++S KLYA DSAPALAIKATMEKTK+RFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIAI EKKP Sbjct: 1 MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKP 191
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_FLATR (Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia GN=PSAF PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 8.974e-61 Identity = 125/192 (65.10%), Postives = 133/192 (69.27%), Query Frame = 2 Query: 89 MSLTIPTNLSKPL--LKPRSNSQLSHAKLSKQMITCXXXXXXXXXXXXXXXXXXPLQAFXXXXXXXXXXXXXPQPAVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKP 658 MS TI T+ +PL +S+ S +K++ I C L A PA ADISGLTPCKESKQFAKREKQ LKKLESS KLYAPDSAPALAIKATMEKTKRRFDNYGK GLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIAI EKKP Sbjct: 1 MSFTISTSFLQPLEISNLKSSPITSKSKVTSTSIVCSGSTDEKINNADGKSSLKALSAALALSSILVSSTVPALPASADISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPALAIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKP 192
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_HORVU (Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare GN=PSAF PE=1 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 9.286e-58 Identity = 104/120 (86.67%), Postives = 113/120 (94.17%), Query Frame = 2 Query: 299 PQPAVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKP 658 P PA ADI+GLTPCKESK FAKREKQ +KKL SS K YAPDSAPALAI+AT++KTKRRF+NYGK+GLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIA+SGEKKP Sbjct: 72 PPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKP 191
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_CHLRE (Photosystem I reaction center subunit III, chloroplastic OS=Chlamydomonas reinhardtii GN=PSAF PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.958e-35 Identity = 75/124 (60.48%), Postives = 90/124 (72.58%), Query Frame = 2 Query: 299 PQPAVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLI----VSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKP 658 P A+ADI+GLTPC ESK +AK EK++LK LE K Y DSAPA+A+KATME+TK RF NY K GLLCG+DGLPHLI ++ H GE P FLY+AG+IG+VGR YLIA+ GE KP Sbjct: 57 PSAAMADIAGLTPCSESKAYAKLEKKELKTLEKRLKQYEADSAPAVALKATMERTKARFANYAKAGLLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKP 180
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_GUITH (Photosystem I reaction center subunit III OS=Guillardia theta GN=psaF PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.204e-33 Identity = 66/120 (55.00%), Postives = 81/120 (67.50%), Query Frame = 2 Query: 299 PQPAVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKP 658 P + AD++GL PCK SK+F +R +KKLES Y P++ P LA++ + KTK RF YG GLLCG+DGLPHLI G H GEF+ PGL FLYIAGWIGWVGR+Y+ S KP Sbjct: 17 PVASHADVAGLVPCKNSKEFQRRLDSSVKKLESRLSKYEPNTPPYLALETQINKTKNRFTQYGNAGLLCGTDGLPHLIADGRWSHAGEFMVPGLFFLYIAGWIGWVGRNYVQFASQTDKP 136 HSP 2 Score: 21.557 bits (44), Expect = 6.204e-33 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 664 KEIIIDVPLA 693 KEIIIDVP+A Sbjct: 139 KEIIIDVPVA 148
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_PORYE (Photosystem I reaction center subunit III OS=Porphyra yezoensis GN=psaF PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.950e-31 Identity = 64/120 (53.33%), Postives = 82/120 (68.33%), Query Frame = 2 Query: 299 PQPAVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKP 658 P A A+++GL PCK+S F KR +KKL++ Y D+ PALA+ +EKTK RF YG+ GLLCG+DGLPHLI G G+F+ PGLLFLYI GWIGWVGR YL++++ KP Sbjct: 15 PIIANAEVAGLVPCKDSAAFNKRMVNSVKKLQARLAKYDADTPPALALNKQIEKTKTRFATYGRAGLLCGTDGLPHLISDGRWSRAGDFVFPGLLFLYITGWIGWVGRGYLLSVAKTSKP 134
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_ODOSI (Photosystem I reaction center subunit III OS=Odontella sinensis GN=psaF PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.344e-31 Identity = 66/120 (55.00%), Postives = 78/120 (65.00%), Query Frame = 2 Query: 299 PQPAVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKP 658 P A+ADI GLT C ES F KR K +KKLE Y S PALA++ +E+T+ RFD Y + LLCG+DGLPHLI G H EFI PG F+YI+GWIGWVGR YL A+S K P Sbjct: 19 PNRALADIGGLTKCSESPAFEKRLKASVKKLEQRMGKYEAGSPPALALQQQIERTQARFDKYSRSELLCGTDGLPHLIADGRWSHAAEFILPGFGFIYISGWIGWVGRKYLRAVSTTKNP 138
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_CYAPA (Photosystem I reaction center subunit III OS=Cyanophora paradoxa GN=psaF PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 9.377e-31 Identity = 63/114 (55.26%), Postives = 81/114 (71.05%), Query Frame = 2 Query: 302 QPAVADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAIS 643 +P AD++GL PC +S F +R K ++LE+ K Y P SAPA A++ ++KT++RFD Y GLLCG+DGLPHLI G H GEF PGLLFLYIAG+IGW GRSYL A++ Sbjct: 21 RPVRADVAGLIPCSQSDAFERRLKNTTQRLENRLKKYEPGSAPAEALQKQIDKTQQRFDKYRNSGLLCGADGLPHLITDGRWSHAGEFTIPGLLFLYIAGFIGWSGRSYLQAVA 134 HSP 2 Score: 21.9422 bits (45), Expect = 9.377e-31 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1 Query: 664 KEIIIDVPLASRXV 705 KEIIID+P+A + V Sbjct: 142 KEIIIDIPVALQSV 155
BLAST of FC920499 vs. ExPASy Swiss-Prot
Match: PSAF_PORPU (Photosystem I reaction center subunit III OS=Porphyra purpurea GN=psaF PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30 Identity = 61/115 (53.04%), Postives = 80/115 (69.57%), Query Frame = 2 Query: 314 ADISGLTPCKESKQFAKREKQQLKKLESSPKLYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKP 658 A+++GL PCK+S F KR +KKL++ Y ++ PALA+ +EKTK RF YG+ GLLCG+DGLPHLI G G+F+ PGLLFLYI GWIGWVGR YL++++ KP Sbjct: 24 AEVAGLIPCKDSAAFNKRMVNSVKKLQARLAKYDANTPPALALNKQIEKTKTRFATYGRAGLLCGTDGLPHLISDGRWSRAGDFVFPGLLFLYITGWIGWVGRGYLLSVAKTSKP 138 The following BLAST results are available for this feature:
BLAST of FC920499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920499 ID=FC920499; Name=FC920499; organism=Citrus clementina; type=EST; length=705bpback to top |