FC920640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920640 vs. ExPASy Swiss-Prot
Match: KCS10_ARATH (3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana GN=FDH PE=1 SV=2) HSP 1 Score: 239.195 bits (609), Expect = 7.451e-63 Identity = 119/148 (80.41%), Postives = 135/148 (91.22%), Query Frame = 1 Query: 46 MARS-ERDLLSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLQVTREQFIEV 486 M RS E+DLLSTEIVNRGIE SGPNAGS TFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHA+YLATIPVL+LVFSAEVGSLSREE+W+KLW+ +DLA+V+GFFGVF T VYFMSRPRSVYL+DFACY+P D+ +VT+E+FIE+ Sbjct: 1 MGRSNEQDLLSTEIVNRGIEPSGPNAGSPTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAVYLATIPVLVLVFSAEVGSLSREEIWKKLWD---YDLATVIGFFGVFVLTACVYFMSRPRSVYLIDFACYKPSDEHKVTKEEFIEL 145
BLAST of FC920640 vs. ExPASy Swiss-Prot
Match: KCS4_ARATH (3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.623e-25 Identity = 59/125 (47.20%), Postives = 83/125 (66.40%), Query Frame = 1 Query: 109 GPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLQVTREQFIE 483 G GS+ +R R LPDFLQSVNLKYVKLGYHYLI++ + L P L +V S E ++ ++L ++LW +++L S++ + F L+VY M+RPR VYLVDF+CY PPD L+ +F+E Sbjct: 13 GGGDGSVGVQIRQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCLFP-LAVVISVEASQMNPDDL-KQLWIHLQYNLVSIIICSAILVFGLTVYVMTRPRPVYLVDFSCYLPPDHLKAPYARFME 135
BLAST of FC920640 vs. ExPASy Swiss-Prot
Match: KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.060e-24 Identity = 53/112 (47.32%), Postives = 79/112 (70.54%), Query Frame = 1 Query: 148 RRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLQVTREQFIE 483 RR+LP+FLQSVN+KYVKLGYHYLI H L +P L+ V E+ L+ ++L++ +W +++L + + + F +VY MSRPRSVYLVD++CY PP+ LQV ++F++ Sbjct: 22 RRKLPNFLQSVNMKYVKLGYHYLITHLFKLCLVP-LMAVLVTEISRLTTDDLYQ-IWLHLQYNLVAFIFLSALAIFGSTVYIMSRPRSVYLVDYSCYLPPESLQVKYQKFMD 131
BLAST of FC920640 vs. ExPASy Swiss-Prot
Match: KCS11_ARATH (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.193e-22 Identity = 51/111 (45.95%), Postives = 78/111 (70.27%), Query Frame = 1 Query: 151 RRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLQVTREQFIE 483 R LPDF +SV LKYVKLGYHYLI H +YL P L+LV +A++ + S +L LWE +++L SV+ + F +++YFM+RPR VYLV+F+C++P + + T++ F++ Sbjct: 15 RNLPDFKKSVKLKYVKLGYHYLITHGMYLFLSP-LVLVIAAQISTFSVTDL-RSLWEHLQYNLISVVVCSMLLVFLMTIYFMTRPRPVYLVNFSCFKPDESRKCTKKIFMD 123
BLAST of FC920640 vs. ExPASy Swiss-Prot
Match: KCS6_ARATH (3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.126e-18 Identity = 49/111 (44.14%), Postives = 71/111 (63.96%), Query Frame = 1 Query: 157 LPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVL--GFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLQVTREQFIE 483 +P+F SV LKYVKLGY YL+NH + IP++ +V + E+ + EE+ +W + DL VL FF +F T VYFMS+PR++YLVD++CY+PP +V F+E Sbjct: 6 MPEFSSSVKLKYVKLGYQYLVNHFLSFLLIPIMAIV-AVELLRMGPEEILN-VWNSLQFDLVQVLCSSFFVIFIST--VYFMSKPRTIYLVDYSCYKPPVTCRVPFATFME 112
BLAST of FC920640 vs. ExPASy Swiss-Prot
Match: KCS17_ARATH (3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 1.471e-18 Identity = 51/112 (45.54%), Postives = 75/112 (66.96%), Query Frame = 1 Query: 151 RRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLS-REELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLQVTREQFIE 483 ++LP+FL SV LKYVKLGYHYLI++A+Y+ +PV LL ++ SL+ L+ L + H L+S L F + F ++YF +RPR ++L+DFACY+P L TRE F++ Sbjct: 20 KKLPNFLLSVRLKYVKLGYHYLISNAVYILILPVGLLAATSSSFSLTDLTLLYNHLLK--FHFLSSTL-FAALLIFLTTLYFTTRPRRIFLLDFACYKPDSSLICTRETFMD 128
BLAST of FC920640 vs. ExPASy Swiss-Prot
Match: KCS5_ARATH (3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.232e-16 Identity = 47/109 (43.12%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 157 LPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLQVTREQFIE 483 + DF SV LKYVKLGY YLIN+ + L IPV+ V + E+ + EE+ L +L +L + F +VYFMS+PR+VYLVD++CY+PP +V F+E Sbjct: 1 MSDFSSSVKLKYVKLGYQYLINNFLTLLLIPVIATV-AIELLRMGPEEILSVL-NSLHFELLHILCSSFLIIFVSTVYFMSKPRTVYLVDYSCYKPPVTCRVPFSSFME 107
BLAST of FC920640 vs. ExPASy Swiss-Prot
Match: KCS19_ARATH (3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.834e-16 Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 157 LPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLQVTREQFIE 483 LP+FL SV LKYVKLGYHYLI++A+Y+ +P LL A + S + +L L+ R S + + YF +RPR V+L+DF+CY+P L TRE F++ Sbjct: 28 LPNFLLSVRLKYVKLGYHYLISNALYILLLP-LLAATIANLSSFTINDL-SLLYNTLRFHFLSATLATALLISLSTAYFTTRPRRVFLLDFSCYKPDPSLICTRETFMD 134
BLAST of FC920640 vs. ExPASy Swiss-Prot
Match: KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.861e-13 Identity = 43/117 (36.75%), Postives = 67/117 (57.26%), Query Frame = 1 Query: 139 VRVRRRLPDFLQSVNLKYVKLGYHYLINHAIYLATIPVLLLVFSAEVGSLSRE-ELWEKLWED--TRHDLASVLGFFGVFAFTLSVYFMSRPRSVYLVDFACYRPPDDLQVTREQFI 480 +R+RRRLPD L SV LKYVKLG H N L + +L L + V + + +LW + + D A+ L +F L++Y +R + VYLVDF+CY+P D+ +++ + F+ Sbjct: 28 IRIRRRLPDLLTSVKLKYVKLGLHNSCNVTTILFFLIILPLTGTVLVQLTGLTFDTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSKPVYLVDFSCYKPEDERKISVDSFL 144
BLAST of FC920640 vs. ExPASy Swiss-Prot
Match: KCS15_ARATH (3-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana GN=KCS15 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.584e-12 Identity = 49/145 (33.79%), Postives = 71/145 (48.97%), Query Frame = 1 Query: 73 STEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHA-IYLATIPVLLLVFSAEVGSLSREELWEKLWEDTRHDLASVLGFFGVFAFTLSVYFMS------RPRSVYLVDFACYRPPDDLQVTREQFIEV 486 +T++VN G++S P PDFL NL+YVKLGY YL++ + + +P LLL+F V F + AF LS +F+ P SV+L+DF+CYRPPD L++T+ FIE+ Sbjct: 5 ATKMVNGGVKSKSPKGS------------PDFL-GYNLRYVKLGYIYLLSLSRTFCFFLPPLLLLF------------------------IFVSRFLPILAFPLSTFFILLIYHYLTPSSVFLLDFSCYRPPDHLKITKSDFIEL 112 The following BLAST results are available for this feature:
BLAST of FC920640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920640 ID=FC920640; Name=FC920640; organism=Citrus clementina; type=EST; length=488bpback to top |