FC920688
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920688 vs. ExPASy Swiss-Prot
Match: NIPA3_PONAB (Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.460e-52 Identity = 101/218 (46.33%), Postives = 147/218 (67.43%), Query Frame = 2 Query: 2 TPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPD 655 TPLGALS+++SA+L+ + LNE L G +GC+L ++GST++V+HAP EE + S+ E+ + P F+ + V ++LVLIL AP+ GQTNIL+YI ICS+IG+ +V SVK +GIAIK +E K ++ V + V TQ+NYLN ALDTFNT++V+PIYY FTS + SAI+F+++ G +A I L GF T++ G +LH+ + D Sbjct: 144 TPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAPQEEEVTSLHEMEMKLRDPGFISFAVIVTVISLVLILIVAPKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSIVTPIYYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTD 361
BLAST of FC920688 vs. ExPASy Swiss-Prot
Match: NIPA2_PONAB (Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.902e-52 Identity = 99/216 (45.83%), Postives = 143/216 (66.20%), Query Frame = 2 Query: 2 TPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTRE 649 TPLGALS++VSA+L+ + LNE+L G +GCLL ++GST++V+HAP EE + ++ E+ P F+++ VV VAL+LI PR+GQTNIL+YI ICSVIG+ +V VK +GIAIK G + WI + + CV TQ+NYLN ALD FNT++V+PIYY FT+ + SAI+FK++ + L GF T++ G +LH+ ++ Sbjct: 86 TPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301
BLAST of FC920688 vs. ExPASy Swiss-Prot
Match: NIPA2_HUMAN (Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.902e-52 Identity = 99/216 (45.83%), Postives = 143/216 (66.20%), Query Frame = 2 Query: 2 TPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTRE 649 TPLGALS++VSA+L+ + LNE+L G +GCLL ++GST++V+HAP EE + ++ E+ P F+++ VV VAL+LI PR+GQTNIL+YI ICSVIG+ +V VK +GIAIK G + WI + + CV TQ+NYLN ALD FNT++V+PIYY FT+ + SAI+FK++ + L GF T++ G +LH+ ++ Sbjct: 86 TPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301
BLAST of FC920688 vs. ExPASy Swiss-Prot
Match: NIPA2_BOVIN (Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.902e-52 Identity = 99/216 (45.83%), Postives = 144/216 (66.67%), Query Frame = 2 Query: 2 TPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTRE 649 TPLGALS++VSA+L+ + LNE+L G +GCLL ++GST++V+HAP EE + ++ E+ P F+++ VV V+L+LI PR+GQTNIL+YI ICSVIG+++V K +GIAIK G + TWI + + CV TQ+NYLN ALD FNT++V+PIYY FT+ I SAI+FK++ + L GF T++ G +LH+ ++ Sbjct: 86 TPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVSLILIFVVGPRHGQTNILVYITICSVIGAVSVSCAKGLGIAIKELFAGKPVLQHPLTWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVITCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301
BLAST of FC920688 vs. ExPASy Swiss-Prot
Match: NIPA3_HUMAN (Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.708e-52 Identity = 100/218 (45.87%), Postives = 147/218 (67.43%), Query Frame = 2 Query: 2 TPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPD 655 TPLGALS+++SA+L+ + LNE L G +GC+L ++GST++V+HAP EE + S+ E+ + P F+ + + ++LVLIL AP+ GQTNIL+YI ICS+IG+ +V SVK +GIAIK +E K ++ V + V TQ+NYLN ALDTFNT++V+PIYY FTS + SAI+F+++ G +A I L GF T++ G +LH+ + D Sbjct: 144 TPLGALSVLISAILSSYFLNEHLNIHGKIGCILSILGSTVMVIHAPQEEEVTSLHEMEMKLRDPGFISFAVIITVISLVLILIVAPKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTD 361
BLAST of FC920688 vs. ExPASy Swiss-Prot
Match: NIPA2_MOUSE (Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.717e-51 Identity = 99/216 (45.83%), Postives = 142/216 (65.74%), Query Frame = 2 Query: 2 TPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTRE 649 TPLGALS++VSA+L+ + LNE+L G +GCLL ++GST++V+HAP EE + ++ E+ P F+++ VV VAL+ I PR+GQTNIL+YI ICSVIG+ +V VK +GIAIK L G + WI + CV TQ+NYLN ALD FNT++V+PIYY FT+ + SAI+FK++ + L GF T++ G +LH+ ++ Sbjct: 86 TPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELLAGKPVLQHPLAWILLFSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301
BLAST of FC920688 vs. ExPASy Swiss-Prot
Match: NIPA3_MOUSE (Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2) HSP 1 Score: 198.749 bits (504), Expect = 2.480e-50 Identity = 100/213 (46.95%), Postives = 144/213 (67.61%), Query Frame = 2 Query: 2 TPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHS 640 TPLGALS+++SA+L+ + LNE+L G +GC+L V+GST++V+HAP E + S+ E+ + P F+ + + ++LVLIL AP+ GQTNIL+YI ICS+IG+ +V SVK +GIAIK LE K +I + V TQ+NYLN ALDTFNT++V+PIYY FTS + SAI+F+++ G A I L GF T+++G +LH+ Sbjct: 144 TPLGALSVLISAILSSYFLNERLNIHGKIGCILSVLGSTVMVIHAPQEGEVTSLHEMEMKLRDPGFVSFAVIISVISLVLILIVAPKKGQTNILVYIAICSLIGAFSVSSVKGLGIAIKELLERKPVYKDPLFFILLTMLALSVTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGMKAGDIIGTLSGFFTIINGIFLLHA 356
BLAST of FC920688 vs. ExPASy Swiss-Prot
Match: NIPA4_HUMAN (Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3) HSP 1 Score: 195.282 bits (495), Expect = 2.741e-49 Identity = 95/218 (43.58%), Postives = 145/218 (66.51%), Query Frame = 2 Query: 2 TPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPD 655 TPLGALS+++SA+L+ + L E L +G LGC++CV GST++V+HAP EE + ++ E+ F+++ ++ L+LI APRYGQ NILIYI ICSVIG+ +V +VK +GI IK +GL + +I +++ + TQ+N+LN ALD FNT++V PIYY FT+ + +S I+FK++ SA IA L GF+T++ G +LH+ ++ D Sbjct: 194 TPLGALSVLISAILSSYFLRESLNLLGKLGCVICVAGSTVMVIHAPEEEKVTTIMEMASKMKDTGFIVFAVLLLVSCLILIFVIAPRYGQRNILIYIIICSVIGAFSVAAVKGLGITIKNFFQGLPVVRHPLPYILSLILALSLSTQVNFLNRALDIFNTSLVFPIYYVFFTTVVVTSSIILFKEWYSMSAVDIAGTLSGFVTIILGVFMLHAFKDLD 411
BLAST of FC920688 vs. ExPASy Swiss-Prot
Match: NIPA4_MOUSE (Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.031e-48 Identity = 95/231 (41.13%), Postives = 149/231 (64.50%), Query Frame = 2 Query: 2 TPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLEGLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTREPDTPLITDLYTPLSP 694 TPLGALS+++SA+ + + L E L +G LGC++C+ GST++V+HAP EE + +V E+ F+++ +V L+LI APRYGQ NILIYI ICSVIGS +V +VK +G+ I+ +GL + +I +++ +I Q+N+LN ALD FNT++V PIYY FT+ + +S ++FK++ SA I L GF+T++ G +LH+ ++ D I+ +T +P Sbjct: 134 TPLGALSVLISAIFSSYCLGESLNLLGKLGCVICMAGSTVMVIHAPKEEKVTTVAEMASKMKDTGFIVFAVLLVVSCLILIFIVAPRYGQRNILIYIIICSVIGSFSVTAVKGLGVTIRNFFQGLPVVRHPLPYILSLILGLSIIIQVNFLNRALDIFNTSLVFPIYYVFFTTVVVASSIVLFKEWYTMSAVDIVGTLSGFVTIILGVFMLHAFKDLDINQISLPHTHKNP 364
BLAST of FC920688 vs. ExPASy Swiss-Prot
Match: NIPA1_MOUSE (Magnesium transporter NIPA1 OS=Mus musculus GN=Nipa1 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.844e-38 Identity = 83/219 (37.90%), Postives = 132/219 (60.27%), Query Frame = 2 Query: 2 TPLGALSIIVSAVLAHFMLNEKLQKMGMLGCLLCVVGSTMIVLHAPLEESLNSVQEIWVLATQPAFLLYVGSVVAVALVLILYCAPRYGQTNILIYIGICSVIGSLTVMSVKAIGIAIKLTLE---GLNQAKCIETWIFAMVALTCVITQLNYLNMALDTFNTAVVSPIYYAMFTSFTIFASAIMFKDYSGQSASSIASELCGFITVLSGTSVLHSTRE 649 TPLGAL + ++LA ++L EKL +G LGCLL GS ++++H+P ES+ + E+ T P F+ Y+ V+ + L+LI + AP +G TNI++YI ICS++GS TV S K IG+A + L +A C+ + A++ + +I Q Y+N AL+ F+++V IYY +FT+ + ASAI+F+++S CGF TV G ++ +E Sbjct: 90 TPLGALGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVVLIIHSPKSESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISICSLLGSFTVPSTKGIGLAAQDILHNNPSSQRALCLCLVLLAVLGCS-IIVQFRYINKALECFDSSVFGAIYYVVFTTLVLLASAILFREWSNVGLVDFLGMACGFTTVSVGIVLIQVFKE 307 The following BLAST results are available for this feature:
BLAST of FC920688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920688 ID=FC920688; Name=FC920688; organism=Citrus clementina; type=EST; length=713bpback to top |