FC920699

Overview
NameFC920699
Unique NameFC920699
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length747
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14178 contig Ccv1_Contig14178:1..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 334.339 bits (856), Expect = 4.119e-91
Identity = 145/201 (72.14%), Postives = 164/201 (81.59%), Query Frame = 3
Query:  111 AKFDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            A F+I NNCP TVWAAAVPGGG++LD+GQ W I    GTK AR+W RT C FD +G+GKC+TGDCNGLL+CQ +G  PNTLAEYAL QFN++DF D+S +DGFNV MEFS  S  C R IKCTA+I G+CPNEL+ PGGCN PC VFKTD+YCCNSGNCG T FSKFFKDRCPD YSYPKDD TS FTCP GT+YKVVFCP
Sbjct:   25 ATFNIINNCPFTVWAAAVPGGGKRLDRGQNWIINPGAGTKGARVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGGCTRGIKCTADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSGNCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVFCP 225          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 9.198e-83
Identity = 133/202 (65.84%), Postives = 159/202 (78.71%), Query Frame = 3
Query:  111 AKFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            A+F+ITN C  TVWAA+VP GGG QL+ GQ+W++    GTK AR+WART C FD SG+G C+TGDC G+L+C+ YGA PNTLAEY L  FN++DF D+S +DGFNVPM+FS  S  C R I CTA+I G+CP+ELK  GGCN PC VFKTD+YCCNSG+CGPT +S+FFK RCPD YSYPKDD  S FTC  GTDY+VVFCP
Sbjct:    1 ARFEITNRCTYTVWAASVPVGGGVQLNPGQSWSVDVPAGTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAYGAPPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSNGCTRGISCTADINGQCPSELKTQGGCNNPCTVFKTDQYCCNSGSCGPTDYSRFFKQRCPDAYSYPKDDPPSTFTCNGGTDYRVVFCP 202          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.328e-81
Identity = 135/205 (65.85%), Postives = 160/205 (78.05%), Query Frame = 3
Query:  105 HAAKFDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            HAA FDI N C  TVWAAA PGGGR+LD GQ+W+I   PGT  ARIW RT C FD SG+G CETGDCNG+LECQGYG APNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN PC V KT+EYCC +  G+CGPT  S+FFK+RCPD YSYP+DD TS+FTCP+GT+Y+VVFCP
Sbjct:   24 HAATFDIVNKCTYTVWAAASPGGGRRLDSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKAPNTLAEFALNQPN-QDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEYCCTNGPGSCGPTDLSRFFKERCPDAYSYPQDDPTSLFTCPSGTNYRVVFCP 226          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 4.724e-79
Identity = 132/205 (64.39%), Postives = 156/205 (76.10%), Query Frame = 3
Query:  105 HAAKFDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            HAA FDI N C  TVWAAA PGGGRQL+ GQ+W+I   PGT  ARIW RT C FD SG+G CETGDCNG+LECQGYG  PNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN PC V KT+E+CC +  G+CGPT  S+FFK RCPD YSYP+DD  S+FTCP GT+Y+VVFCP
Sbjct:   24 HAATFDIVNQCTYTVWAAASPGGGRQLNSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKPPNTLAEFALNQPN-QDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEFCCTNGPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRVVFCP 226          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.795e-78
Identity = 129/207 (62.32%), Postives = 156/207 (75.36%), Query Frame = 3
Query:  105 HAAKFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTG-TDYKVVFCP 713
            +AA F++ NNCP TVWAA+ P GGGR+LD+GQTW I A  GTK ARIW RT C FD  G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S+FFK RCPD YSYP+DD TS FTCP+G T+Y+VVFCP
Sbjct:   12 YAATFEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGDGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 218          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 291.582 bits (745), Expect = 3.062e-78
Identity = 129/207 (62.32%), Postives = 157/207 (75.85%), Query Frame = 3
Query:  105 HAAKFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTG-TDYKVVFCP 713
            +AA  ++ NNCP TVWAA+ P GGGR+LD+GQTW I A  GTK AR+W RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+ +DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP EL+VPGGCN PC  F   +YCC  G CGPT FSKFFK RCPD YSYP+DD TS FTCP G T+Y+V+FCP
Sbjct:   20 YAATIEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARVWGRTNCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRVPGGCNNPCTTFGGQQYCCTQGPCGPTFFSKFFKQRCPDAYSYPQDDPTSTFTCPGGSTNYRVIFCP 226          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: OS81_SOLCO (Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.822e-78
Identity = 130/207 (62.80%), Postives = 156/207 (75.36%), Query Frame = 3
Query:  105 HAAKFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTG-TDYKVVFCP 713
            +AA  ++ NNCP TVWAA+ P GGGR+L+KGQTW I A  GTK ARIW RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+   PS  +   I CTANI GECP  LKVPGGCN PC  F   +YCC  G CGPT  SKFFK RCPD YSYP+DD TS FTCP+G T+Y+VVFCP
Sbjct:   20 YAATIEVRNNCPYTVWAASTPIGGGRRLNKGQTWVINAPRGTKMARIWGRTGCNFNAAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSAGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.822e-78
Identity = 128/207 (61.84%), Postives = 156/207 (75.36%), Query Frame = 3
Query:  105 HAAKFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTG-TDYKVVFCP 713
            +AA  ++ NNCP TVWAA+ P GGGR+LD+GQTW I A  GTK ARIW RT C FD +G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S+FFK RCPD YSYP+DD TS FTCP+G T+Y+VVFCP
Sbjct:   20 YAATIEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 289.271 bits (739), Expect = 1.520e-77
Identity = 127/204 (62.25%), Postives = 160/204 (78.43%), Query Frame = 3
Query:  108 AAKFDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            AA F+I N C  TVWAAA PGGGR+LD GQ+W +    GTK ARIW RT C FD+SG+G+C+TGDC+G L+C G+G  PNTLAEYAL QFN++DF D+S +DGFN+PMEFS  S +C+R++ CTA+I G+CPN L+ PGGCN PC VF+T++YCC +  G+C  T +S+FFK RCPD YSYP+DD TS FTC T T+Y+VVFCP
Sbjct:   22 AATFEILNQCSYTVWAAASPGGGRRLDAGQSWRLDVAAGTKMARIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSSNCHRIL-CTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSDTEYSRFFKQRCPDAYSYPQDDPTSTFTC-TNTNYRVVFCP 223          
BLAST of FC920699 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 287.345 bits (734), Expect = 5.775e-77
Identity = 132/207 (63.77%), Postives = 157/207 (75.85%), Query Frame = 3
Query:  108 AAKFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPS-CNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCC---NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSIFTCPTGTDYKVVFCP 713
            AA F + N CP TVWAA+VP GGGRQL++G++W ITA  GT AARIWART C+FDASG+G C TGDC G+L+C GYG APNTLAEYALKQFN++DF D+S IDGFNVPM F     S C+R  +C  ++   CP EL+  G CN  CPVFK DEYCC    + +C PT +S++FK +CPD YSYPKDDATS FTCP GT+YKVVFCP
Sbjct:   21 AAVFTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 227          
The following BLAST results are available for this feature:
BLAST of FC920699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLP_ACTDE4.119e-9172.14Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
P21_SOYBN9.198e-8365.84Protein P21 OS=Glycine max PE=1 SV=1[more]
PRR1_TOBAC1.328e-8165.85Pathogenesis-related protein R major form OS=Nicot... [more]
PRR2_TOBAC4.724e-7964.39Pathogenesis-related protein R minor form OS=Nicot... [more]
TPM1_SOLLC1.795e-7862.32Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
OSMO_TOBAC3.062e-7862.32Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
OS81_SOLCO6.822e-7862.80Osmotin-like protein OSML81 OS=Solanum commersonii... [more]
OS13_SOLCO6.822e-7861.84Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
OSL3_ARATH1.520e-7762.25Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
ZEAM_MAIZE5.775e-7763.77Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC32011H07EF RVDevelop1 Citrus clementina cDNA clone C32011H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920699 ID=FC920699; Name=FC920699; organism=Citrus clementina; type=EST; length=747bp
GAAACTTATCTATTTTCATATTCATTATCCTCTCCAAAATGAAGTTCGTT
AAAGCTCTTCCCATTCCTTCTGCTCTTCTTATTATCATTTCCATCACCCT
GACTCATGCTGCCAAATTCGATATCACAAACAATTGCCCCGACACCGTCT
GGGCCGCCGCTGTGCCCGGAGGCGGCAGGCAACTCGACAAGGGTCAAACA
TGGACCATCACCGCCGAGCCAGGCACAAAAGCAGCCCGCATTTGGGCTCG
AACCAAATGCCAGTTTGATGCTTCCGGCAAAGGCAAATGCGAGACCGGTG
ACTGTAACGGACTCCTCGAGTGCCAAGGCTACGGTGCAGCACCTAACACC
TTGGCCGAGTACGCGTTGAAGCAATTCAATGACATGGATTTCATTGACAT
GTCCAACATTGACGGATTCAATGTTCCCATGGAATTTAGCTCTGTCTCTC
CCTCATGCAACCGCGTGATCAAGTGCACTGCTAACATTCTTGGCGAGTGC
CCGAATGAATTGAAGGTTCCTGGAGGATGTAACGGGCCGTGCCCCGTGTT
CAAGACCGACGAGTACTGTTGCAATTCAGGCAACTGCGGACCTACAGGTT
TCTCCAAGTTTTTCAAGGATAGGTGCCCGGATGTTTACAGTTACCCTAAG
GATGACGCTACCAGCATATTTACTTGCCCGACTGGGACAGACTACAAGGT
TGTATTCTGCCCCTGAAGCATTTTTTTTCAGGGGTAGAAATGGAATA
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