FC920842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODCP_SOLCS (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra GN=SODCP PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.157e-59 Identity = 121/195 (62.05%), Postives = 140/195 (71.79%), Query Frame = 3 Query: 90 AHVLLVAAPPSSSHTLLATLPNPXXXXXXXXXXXXXXXXXXAFHGVSLKFP---SRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 AH +L ++P +++ +L+ + NP +FHGVSLK L LS AA A+ KPLT LKGTS+VEGVVTLTQE+ GPTTVNV++TGLTPGPHGFHLHE+GDTTNGCISTG HFNPN THGAP+DE RHAGDLGNI+ANA+GVAEATIVDNQI L GPN VVGRAFVVHE Sbjct: 3 AHCILFSSPAATT-SLIFPISNPNTAVSLPSS---------SFHGVSLKSTINRQSLTLSAAASAAPKPLTVFAATKKAVAVLKGTSSVEGVVTLTQEEDGPTTVNVKITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNGNTHGAPEDENRHAGDLGNIIANADGVAEATIVDNQIPLTGPNAVVGRAFVVHE 187
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODCP_PEA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Pisum sativum GN=SODCP PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.289e-58 Identity = 120/193 (62.18%), Postives = 133/193 (68.91%), Query Frame = 3 Query: 87 MAHVLLVAAPPSSSHTLLATLPNPXXXXXXXXXXXXXXXXXXAFHGVSLKFPSRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 MA LV+ P SSH+LL T +F GVS+K + S A ++ KPLT LKGTS VEGVVTLTQ+D GPTTVNVR+TGLTPG HGFHLHEYGDTTNGCISTG HFNPN +THGAP+DE+RHAGDLGNIVANA GVAEATIVDNQI L GPN+VVGRA VVHE Sbjct: 1 MASQTLVSPSPLSSHSLLRT----------------------SFSGVSVKLAPQF--STLATSNFKPLTVVAAAKKAVSVLKGTSAVEGVVTLTQDDEGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNKLTHGAPEDEIRHAGDLGNIVANAEGVAEATIVDNQIPLTGPNSVVGRALVVHE 169
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODCP_SPIOL (Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea GN=SODCP PE=1 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 1.414e-57 Identity = 114/193 (59.07%), Postives = 137/193 (70.98%), Query Frame = 3 Query: 90 AHVLLVAAPPSSSHTLLATLPNPXXXXXXXXXXXXXXXXXXAFHGVSLKF-PSRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 AH +L +AP ++ +L++ + +F+G+S K P+ +LSL+ A+ KPLT LKGTSNVEGVVTLTQED GPTTVNVR++GL PG HGFHLHE+GDTTNGC+STG HFNP+ THGAP+DEVRHAGDLGNIVAN +GVAEATIVDNQI L GPN+VVGRA VVHE Sbjct: 3 AHTILASAPSHTTFSLISPFSSTPTNALSSSLQSS------SFNGLSFKLSPTTQSLSLSTSAASKPLTIVAATKKAVAVLKGTSNVEGVVTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGPHFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHE 189
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODCP_PETHY (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida GN=SODCP PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.197e-56 Identity = 108/153 (70.59%), Postives = 122/153 (79.74%), Query Frame = 3 Query: 213 AFHGVSLKFPSRL--NLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 +FHGVSLK S+ +L+L++V S KP LKGTSNVEGVVTLTQ+D GPTTV VR+TGL PG HGFHLHE+GDTTNGC+STG HFNPN +THGAP DEVRHAGDLGNI ANA+GVAEAT+VDNQI L GPN+VVGRA VVHE Sbjct: 34 SFHGVSLKVKSKTPQSLTLSSVTSPKPFIVFAATKKAVAVLKGTSNVEGVVTLTQDDDGPTTVKVRITGLAPGLHGFHLHEFGDTTNGCMSTGPHFNPNGLTHGAPGDEVRHAGDLGNIEANASGVAEATLVDNQIPLSGPNSVVGRALVVHE 186
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODCP_ARATH (Superoxide dismutase [Cu-Zn], chloroplastic OS=Arabidopsis thaliana GN=SODCP PE=1 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 1.197e-56 Identity = 112/154 (72.73%), Postives = 123/154 (79.87%), Query Frame = 3 Query: 213 AFHGVSLKFPS--RL-NLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 +F GVSL + RL ++S A A K LT LKGTS+VEGVVTLTQ+D GPTTVNVR+TGLTPGPHGFHLHE+GDTTNGCISTG HFNPNNMTHGAP+DE RHAGDLGNI ANA+GVAE TIVDNQI L GPN+VVGRAFVVHE Sbjct: 30 SFRGVSLNNNNLHRLQSVSFAVKAPSKALTVVSAAKKAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHE 183
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODCP_VITVI (Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera GN=SODCP PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 4.548e-56 Identity = 109/179 (60.89%), Postives = 127/179 (70.95%), Query Frame = 3 Query: 129 HTLLATLPNPXXXXXXXXXXXXXXXXXXAFHGVSLKFPSRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 +TLL+T P+ FHG+SLK + S+ + KPL+ LKGTS+VEGVVTL+QED GPTTV+VR+TGLTPG HGFHLHE+GDTTNGC+STGAHFNPN MTHGAP+D+VRHAGDLGNI+ANA GVAEATIVD QI L GPN V+GRA VVHE Sbjct: 4 NTLLSTAPSRVFLSFPNPSPNPSPQLHSQFHGLSLKLTRQ---SIPLATAPKPLSVVAVTKKAVAVLKGTSSVEGVVTLSQEDDGPTTVSVRITGLTPGNHGFHLHEFGDTTNGCMSTGAHFNPNGMTHGAPEDDVRHAGDLGNIIANAEGVAEATIVDTQIPLSGPNAVIGRALVVHE 179
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODCP_SOLLC (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum GN=SODCP.2 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 5.940e-56 Identity = 107/153 (69.93%), Postives = 122/153 (79.74%), Query Frame = 3 Query: 213 AFHGVSLKFPSRL--NLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 +F GVSL ++ +L+L AV + KPLT LKG SNVEGVVTL+Q+D GPTTVNVR+TGL PG HGFHLHEYGDTTNGC+STGAHFNPN +THGAP DE+RHAGDLGNIVANA+GVAE T+VDNQI L GPN+VVGRA VVHE Sbjct: 32 SFLGVSLNVNAKFGQSLTLYAVTTPKPLTVFAATKKAVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHE 184
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODCP_ORYSJ (Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica GN=SODCP PE=1 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.463e-54 Identity = 105/140 (75.00%), Postives = 112/140 (80.00%), Query Frame = 3 Query: 246 RLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 RL A A+ + L LKGTS VEGVVTLTQ+D GPTTVNVRVTGLTPG HGFHLHE+GDTTNGCISTG HFNPNN+THGAP+DEVRHAGDLGNIVANA GVAEATIVD QI L GPN+VVGRAFVVHE Sbjct: 39 RLAAGPAGAAAARALVVADATKKAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHE 178
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODCP_MEDSA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Medicago sativa GN=SODCP PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.759e-53 Identity = 110/193 (56.99%), Postives = 131/193 (67.88%), Query Frame = 3 Query: 87 MAHVLLVAAPPSSSHTLLATLPNPXXXXXXXXXXXXXXXXXXAFHGVSLKFPSRLNLSLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 MA L++ P +SH+LL + +F GVS+K + S + + +PL+ LKG S VEGVVTLTQE+ PTTVNVR+TGLTPG HGFHLHEYGDTTNGCISTG HFNPN +THGAP+DE+RHAGDLGNI+A+ANGVAEATIVDNQI L GPN+V+GRA VVHE Sbjct: 1 MASHSLMSPSPLTSHSLLRS----------------------SFSGVSVKLSPQF--STLSRSKFQPLSVVAAAKKAVAVLKGNSTVEGVVTLTQENESPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNQLTHGAPEDEIRHAGDLGNIIADANGVAEATIVDNQIPLTGPNSVIGRALVVHE 169
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODCP_ZANAE (Superoxide dismutase [Cu-Zn], chloroplastic OS=Zantedeschia aethiopica GN=SODCP PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.336e-52 Identity = 99/136 (72.79%), Postives = 110/136 (80.88%), Query Frame = 3 Query: 258 SLAAVASKKPLTXXXXXXXXXXXLKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 S+AA AS + + LKGTS V+GVVTL QED GPTTVNVR+TGLTPG HGFHLHEYGDTTNGCISTG+HFNPN +THGAP D VRHAGDLGNIVAN +G+AEATIVD+QI L G N+VVGRAFVVHE Sbjct: 48 SIAAAASPRSMVVVAATKKAVAVLKGTSQVDGVVTLVQEDDGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGSHFNPNKLTHGAPMDVVRHAGDLGNIVANVDGLAEATIVDDQIPLSGSNSVVGRAFVVHE 183 The following BLAST results are available for this feature:
BLAST of FC920842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920842 ID=FC920842; Name=FC920842; organism=Citrus clementina; type=EST; length=666bpback to top |