FC920869
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 4.211e-35 Identity = 71/127 (55.91%), Postives = 85/127 (66.93%), Query Frame = 1 Query: 88 GGSAQNCGSGVVCGERDTGHGTDGGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVN-----RPASDY 453 GG + G G D G D G L II + F+ LL +RND RCPA GFYTY+AFI AAK FP FGN+G++ MRKREIAAF QT ETTGGWPDAP G YAWGYCY++++N P+S+Y Sbjct: 63 GGGGGDGGDDGCDGGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINCQPYCDPSSNY 189
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.225e-34 Identity = 74/158 (46.84%), Postives = 94/158 (59.49%), Query Frame = 1 Query: 49 SLLIFSLALSFVLGGSAQNCGSGV----------------------VCGERDTGHGTDGGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPASDYC 456 +L+ F L LS +L GSA+ CG CG + G++G++I+R +F D+L +RN+ CP +GFYTYDAFI AAKAFP FG +G+ T RKREIAAF AQT ETTGGW AP G YAWGYCY+R+ P + YC Sbjct: 5 ALVAFCL-LSLILVGSAEQCGGQAGGRVCPGGACCSKFGWCGNTADYCGSGCQSQCSSTGDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGA-YC 160
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 3.018e-33 Identity = 77/162 (47.53%), Postives = 94/162 (58.02%), Query Frame = 1 Query: 55 LIFSLALSFVLGGSAQNCG---------SGVVCGERDTGHGTDG-------------------GELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPASDYC 456 LIFS LSF L A+ CG +G+ C E T+ G+L IISR F+D+L +RND CPARGFYTYDAFI AAK+FP FG +G+ RK+EIAAFF QT ETTGGW AP G Y+WGYC+ +Q P+S+YC Sbjct: 9 LIFSFLLSFSL---AEQCGRQAGGALCPNGLCCSEFGWCGDTEAYCKQPGCQSQCGGTPPGPTGDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCF-KQEQNPSSNYC 166
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 6.723e-33 Identity = 78/164 (47.56%), Postives = 95/164 (57.93%), Query Frame = 1 Query: 55 LIFSLALSFVLGGSAQNCG---------SGVVCGE------------------RDTGHGTDGG---ELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPASDYC 456 LIFSL LS SA+ CG +G+ C E + T GT G +L IIS F+D+L +RND CPARGFYTY+AFI AAK+FP FG +G+ RK+E+AAFF QT ETTGGW AP G Y+WGYC+ +Q PASDYC Sbjct: 22 LIFSLLLSL---SSAEQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQSQCTPGGTPPGPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCF-KQEQNPASDYC 181
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 6.723e-33 Identity = 79/166 (47.59%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 49 SLLIFSLALSFVLGGSAQNCG---SGVVC------------GERD-------------TGHGTDGGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTG--GWPDAPGGEYAWGYCYIRQVNRPASDYC 456 +L +FSL LS+++ GSA+ CG G +C G D +G G D G L +I+RE F+ +L +RND CPARGFYTYDAFI AAK+FPAF +G++ RKRE+AAF AQT ETTG GW AP G Y WGYCY R++N +DYC Sbjct: 5 ALSVFSLFLSYLILGSAEQCGRQAGGALCPGGLCCSQFGWCGNTDDYCKKENGCQSQCSGSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELN--PADYC 167
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.147e-32 Identity = 68/125 (54.40%), Postives = 84/125 (67.20%), Query Frame = 1 Query: 88 GGSAQNCGSGVVCGERDTGHGTD--GGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPASDYC 456 G + CG G C + G T GG+LG IIS +F+ +L +RND C +GFY+Y+AFI AA++FP FG SG+ T RKREIAAFFAQT ETTGGW AP G YAWGYC++R+ P DYC Sbjct: 48 GNTNDYCGPGN-CQSQCPGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSP-GDYC 170
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.498e-32 Identity = 66/123 (53.66%), Postives = 81/123 (65.85%), Query Frame = 1 Query: 88 GGSAQNCGSGVVCGERDTGHGTDGGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPASDYC 456 G + CG G C + G +L +ISR F+ +L +RND CPA+GFYTYDAFI AAKA+P+FGN+G+ RKREIAAF QT ETTGGW AP G YAWGYC++R+ R S YC Sbjct: 52 GSTTDYCGPG--CQSQCGGPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRE--RNPSTYC 170
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.337e-32 Identity = 69/133 (51.88%), Postives = 87/133 (65.41%), Query Frame = 1 Query: 88 GGSAQNCGSGVVCGERDTGHG----------TDGGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPASDYC 456 G ++ CG G C + +G G +DG +G I+ R++FE LL +RND CPARGFYTY+AF+ AA AFPAFG +GN RKRE+AAF QT ETTGGWP AP G ++WGYC+ +Q P SDYC Sbjct: 57 GTTSDFCGDG--CQSQCSGCGPTPTPTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCF-KQEQNPPSDYC 184
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 4.358e-32 Identity = 61/100 (61.00%), Postives = 75/100 (75.00%), Query Frame = 1 Query: 157 GGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVNRPASDYC 456 GG+LG IIS +F+ +L +RND C +GFY+Y+AFI AA++FP FG SG+ T RKREIAAFFAQT ETTGGW AP G YAWGYC++R+ P DYC Sbjct: 77 GGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSP-GDYC 175
BLAST of FC920869 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 4.358e-32 Identity = 79/172 (45.93%), Postives = 97/172 (56.40%), Query Frame = 1 Query: 34 MRLIGSLLIFSLALSFVLGGSAQNCG---------SGVVCGE--------------------RDTGHGTDGGELGKIISREVFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTG--GWPDAPGGEYAWGYCYIRQVNRPASDYC 456 M + +L IF L L +V+ GSA+ CG G+ C + +G G L +ISRE F +L +RND CPARGFYTYDAFI AA++FPAF +G++ RKREIAAF AQT ETTG GW AP G YAWGYCY R++N P S YC Sbjct: 1 MSFLQALSIFLLLLLYVVVGSAEQCGRQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCSGSGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELN-PPSSYC 170 The following BLAST results are available for this feature:
BLAST of FC920869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920869 ID=FC920869; Name=FC920869; organism=Citrus clementina; type=EST; length=457bpback to top |