FC920875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920875 vs. ExPASy Swiss-Prot
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 8.327e-88 Identity = 156/229 (68.12%), Postives = 184/229 (80.35%), Query Frame = 2 Query: 5 KQRQFKSIELIASENFVCRAVMEALGSHLTNKYSKGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHAPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIANKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP*GGIIF 691 K RQFK +ELIASENF RAVMEALGSH TNKY++GYPG+RYY G + +D++E LC +RALKAF LD WGVNVQPYS + ANFAVYT LL P DRIMGLD PSGGHL+HGY KK+SA+SIFFES PY++ G IDY++LEE A+ ++PK++I G S+YPREWDY R R IA+K GA LMCDMAH SGL+AA+ L SPFDYCD+VTSTTHK+LRGP GIIF Sbjct: 25 KDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSRYYGGTEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGSPANFAVYTALLRPHDRIMGLDLPSGGHLTHGYQT-DKKKISASSIFFESMPYQIGAD-GLIDYQRLEENALLFKPKLIISGASAYPREWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLLDSPFDYCDVVTSTTHKTLRGPRSGIIF 251
BLAST of FC920875 vs. ExPASy Swiss-Prot
Match: GLYC2_DICDI (Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum GN=shmt2 PE=3 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 3.498e-86 Identity = 150/229 (65.50%), Postives = 186/229 (81.22%), Query Frame = 2 Query: 5 KQRQFKSIELIASENFVCRAVMEALGSHLTNKYSKGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHAPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIANKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP*GGIIF 691 KQRQF +ELIASENF RAVME++GS TNKY++G PGARYY GN+ +DQ+ENLC +RAL+ F+L+ + WGVNVQPYS ++ANFA +TGLL P DRIMGLD PSGGHL+HGY KK+SA SIFFES PY+VN +TGY+DY K+E A +RPK+LI G S+YPREWDY R R+IA+K GA L+CDMAHISG++A K+ SPF +CD+VT+TTHK+LRGP G+IF Sbjct: 49 KQRQFTGLELIASENFTSRAVMESIGSCFTNKYAEGLPGARYYGGNEVVDQLENLCIKRALETFNLNPEEWGVNVQPYSGSTANFAAFTGLLKPHDRIMGLDLPSGGHLTHGYQT-DKKKISATSIFFESMPYQVN-ETGYVDYNKMEANAALFRPKLLIAGASAYPREWDYERMRKIADKHGAYLLCDMAHISGMVAGKQAISPFLFCDVVTTTTHKTLRGPRAGLIF 275
BLAST of FC920875 vs. ExPASy Swiss-Prot
Match: GLYC_CAEEL (Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32 PE=1 SV=2) HSP 1 Score: 292.738 bits (748), Expect = 1.205e-78 Identity = 145/229 (63.32%), Postives = 176/229 (76.86%), Query Frame = 2 Query: 5 KQRQFKSIELIASENFVCRAVMEALGSHLTNKYSKGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHAPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIANKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP*GGIIF 691 K+RQ + +ELIASENF +AVM+ALGS + NKYS+GYPGARYY GN++IDQ+E LC +RAL+ F LD WGVNVQP S + ANFAVYT ++ RIMGLD P GGHL+HG+ P +KVSA S FF+S PYKV+P TG IDY+KLE+ AM +RPK +I G S Y R DY RFR+IA K GA LM DMAHISGL+AA + SPF+Y D+VT+TTHKSLRGP G +IF Sbjct: 67 KKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMGLDLPDGGHLTHGFFTP-ARKVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCYARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGALIF 294
BLAST of FC920875 vs. ExPASy Swiss-Prot
Match: GLYM_ARATH (Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 4.580e-78 Identity = 139/229 (60.70%), Postives = 176/229 (76.86%), Query Frame = 2 Query: 5 KQRQFKSIELIASENFVCRAVMEALGSHLTNKYSKGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHAPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIANKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP*GGIIF 691 K RQ+K +ELI SENF +VM+A+GS +TNKYS+GYPGARYY GN+YID E LC +RAL+AF LD + WGVNVQP S + ANF VYT LL P +RIM LD P GGHLSHGY KK+SA SIFFE+ PY+++ TGYIDY+++E+ A +RPK+++ G S+Y R +DY R R++ NK AV++ DMAHISGL+AA + SPFDY D+VT+TTHKSLRGP G +IF Sbjct: 70 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGHLSHGYQT-DTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRGPRGAMIF 297
BLAST of FC920875 vs. ExPASy Swiss-Prot
Match: GLYC_CAEBR (Serine hydroxymethyltransferase OS=Caenorhabditis briggsae GN=mel-32 PE=3 SV=3) HSP 1 Score: 290.812 bits (743), Expect = 4.580e-78 Identity = 146/229 (63.76%), Postives = 175/229 (76.42%), Query Frame = 2 Query: 5 KQRQFKSIELIASENFVCRAVMEALGSHLTNKYSKGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHAPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIANKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP*GGIIF 691 K RQ + +ELIASENF +AVM+ALGS + NKYS+GYPGARYY GN++IDQ+E LC +RAL+ F LD WGVNVQ S + ANFAVYT L+ RIMGLD P GGHL+HG+ P +KVSA S FF+S PYKV+ Q+G IDY+KLEE AM +RPK+LI G S Y R DY RFR+IA K GA LM DMAHISGL+AA + SPF+Y D+VT+TTHKSLRGP G +IF Sbjct: 71 KSRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGGNEFIDQMEILCQKRALEVFGLDPAKWGVNVQSLSGSPANFAVYTALVGANGRIMGLDLPDGGHLTHGFFTP-ARKVSATSEFFQSMPYKVDAQSGLIDYDKLEENAMLFRPKVLIAGVSCYARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGAMIF 298
BLAST of FC920875 vs. ExPASy Swiss-Prot
Match: GLYM_SOLTU (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.020e-77 Identity = 140/229 (61.14%), Postives = 175/229 (76.42%), Query Frame = 2 Query: 5 KQRQFKSIELIASENFVCRAVMEALGSHLTNKYSKGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHAPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIANKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP*GGIIF 691 K RQ+K +ELI SENF +VM+A+GS +TNKYS+GYPGARYY GN+YID E LC +RAL+AF LD WGVNVQP S + ANF VYT LL P +RIM LD P GGHLSHGY KK+SA SIFFE+ PY+++ TGYIDY++LE+ A +RPK+++ G S+Y R +DY R R++ NK A+L+ DMAHISGL+AA + SPFDY D+VT+TTHKSLRGP G +IF Sbjct: 71 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQT-DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYDRIRKVCNKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIF 298
BLAST of FC920875 vs. ExPASy Swiss-Prot
Match: GLYN_FLAPR (Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.332e-77 Identity = 140/229 (61.14%), Postives = 175/229 (76.42%), Query Frame = 2 Query: 5 KQRQFKSIELIASENFVCRAVMEALGSHLTNKYSKGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHAPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIANKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP*GGIIF 691 K RQ+K +ELI SENF +VM+A+GS +TNKYS+GYPGARYY GN+YID E LC +RAL+AF LD+ WGVNVQP S + ANF VYT LL DRIM LD P GGHLSHGY KK+SA SIFFE+ PY++N TGYIDY++LE+ A +RPK+++ G S+Y R +DY R R++ +K A+L+ DMAHISGL+AA + SPFDY D+VT+TTHKSLRGP G +IF Sbjct: 71 KARQWKGLELILSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDAAKWGVNVQPLSGSPANFHVYTALLKAHDRIMALDLPHGGHLSHGYQT-DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIF 298
BLAST of FC920875 vs. ExPASy Swiss-Prot
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.332e-77 Identity = 140/229 (61.14%), Postives = 175/229 (76.42%), Query Frame = 2 Query: 5 KQRQFKSIELIASENFVCRAVMEALGSHLTNKYSKGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHAPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIANKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP*GGIIF 691 K RQ+K +ELI SENF +VM+A+GS +TNKYS+GYPGARYY GN+YID E LC +RAL+AF LD WGVNVQP S + +NF VYT LL P DRIM LD P GGHLSHGY KK+SA SIFFE+ PY+++ TGYIDY++LE+ A +RPK+++ G S+Y R +DY R R++ +K AVL+ DMAHISGL+AA + SPFDY D+VT+TTHKSLRGP G +IF Sbjct: 71 KARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQT-DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIF 298
BLAST of FC920875 vs. ExPASy Swiss-Prot
Match: GLYM_FLAPR (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 3.877e-77 Identity = 139/229 (60.70%), Postives = 174/229 (75.98%), Query Frame = 2 Query: 5 KQRQFKSIELIASENFVCRAVMEALGSHLTNKYSKGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHAPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIANKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP*GGIIF 691 K RQ+K +ELI SENF +VM+A+GS +TNKYS+GYPGARYY GN+YID E LC +RAL+AF LD WGVNVQP S + ANF VYT LL DRIM LD P GGHLSHGY KK+SA SIFFE+ PY++N TGYIDY++LE+ A +RPK+++ G S+Y R +DY R R++ +K A+++ DMAHISGL+AA + SPFDY D+VT+TTHKSLRGP G +IF Sbjct: 71 KARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKAHDRIMALDLPHGGHLSHGYQT-DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAIMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIF 298
BLAST of FC920875 vs. ExPASy Swiss-Prot
Match: GLYC_YEAST (Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces cerevisiae GN=SHM2 PE=1 SV=2) HSP 1 Score: 285.419 bits (729), Expect = 1.924e-76 Identity = 141/228 (61.84%), Postives = 176/228 (77.19%), Query Frame = 2 Query: 8 QRQFKSIELIASENFVCRAVMEALGSHLTNKYSKGYPGARYYTGNQYIDQIENLCFERALKAFDLDSDNWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHAPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIANKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLRGP*GGIIF 691 +RQ SI+LIASENF +V +ALG+ L+NKYS+GYPGARYY GN++ID++E LC +RALKAF + D WGVNVQ S + AN VY ++ P +R+MGL P GGHLSHGY A +K+SA S +FESFPY+VNP+TG IDY+ LE+ A+ YRPK+L+ G S+Y R DY R R+IA+KCGA LM DMAHISGLIAA + SPF+Y DIVT+TTHKSLRGP G +IF Sbjct: 33 ERQKHSIDLIASENFTSTSVFDALGTPLSNKYSEGYPGARYYGGNEHIDRMEILCQQRALKAFHVTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMGLYLPDGGHLSHGY-ATENRKISAVSTYFESFPYRVNPETGIIDYDTLEKNAILYRPKVLVAGTSAYCRLIDYKRMREIADKCGAYLMVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIF 259 The following BLAST results are available for this feature:
BLAST of FC920875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920875 ID=FC920875; Name=FC920875; organism=Citrus clementina; type=EST; length=691bpback to top |