FC920909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920909 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 5.694e-47 Identity = 91/197 (46.19%), Postives = 131/197 (66.50%), Query Frame = 3 Query: 117 MGSNPAPFSDVGKRAKDLLNKDYDFGHKFTLSVPSSTGLGLSATGLKKDEIFIGDINSVYKSGNTTVDVKVDTYSNVSTKVTMVDILPSTKAALSFRIPDHKSGKLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAGIGLNKPDFSAALLLADKGQALXASYIHAVDPFTSVA 707 M P +SD+GK+A+DLL +DY HKFT++ S+TG+ ++A+GLKK E+F+ D+++ K+ N T DVKVDT SNV T +T+ + P K SF +PD KSGK++LQYLH +A I++SIGL +PL+ S G+ + LG ++ FDTA+ +F K AG+ + D A+L L DKG + ASY H V P T+ A Sbjct: 1 MVKGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTA 197
BLAST of FC920909 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 6.295e-46 Identity = 86/197 (43.65%), Postives = 128/197 (64.97%), Query Frame = 3 Query: 117 MGSNPAPFSDVGKRAKDLLNKDYDFGHKFTLSVPSSTGLGLSATGLKKDEIFIGDINSVYKSGNTTVDVKVDTYSNVSTKVTMVDILPSTKAALSFRIPDHKSGKLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAGIGLNKPDFSAALLLADKGQALXASYIHAVDPFTSVA 707 MG P ++++GK+A+DLL KDY HKF+++ S TG+ ++++G KK ++F+ D+N+ K+ N T D+KVDT SN+ T +T+ + P K LSFR+PD +SGKL++QYLH +A I +S+GL P++ S +G+ + LG +V FDT + F K AG+ D A+L L +KG L ASY H V P TS A Sbjct: 1 MGKGPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTA 197
BLAST of FC920909 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 6.960e-45 Identity = 85/197 (43.15%), Postives = 126/197 (63.96%), Query Frame = 3 Query: 117 MGSNPAPFSDVGKRAKDLLNKDYDFGHKFTLSVPSSTGLGLSATGLKKDEIFIGDINSVYKSGNTTVDVKVDTYSNVSTKVTMVDILPSTKAALSFRIPDHKSGKLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAGIGLNKPDFSAALLLADKGQALXASYIHAVDPFTSVA 707 M P ++D+GK+A+DLL KDY KFT+S S TG+ ++++G KK E+F+GD+N+ K+ N T D+KVDT SN+ T +T+ + P KA LSF++P+ SGK++LQYLH +A I SS+GL P++ S+ IG+ L G ++ FDT K A + K D +L L +KG L ASY HA++P ++ A Sbjct: 1 MVKGPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLSNTA 197
BLAST of FC920909 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3) HSP 1 Score: 171.785 bits (434), Expect = 3.233e-42 Identity = 82/187 (43.85%), Postives = 124/187 (66.31%), Query Frame = 3 Query: 129 PAPFSDVGKRAKDLLNKDYDFGHKFTLSVPSSTGLGLSATGLKKDEIFIGDINSVYKSGNTTVDVKVDTYSNVSTKVTMVDILPSTKAALSFRIPDHKSGKLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAGIGLNKPDFSAALLLADKGQALXASYIHAVD 689 P + ++GK+A+DLL +DY HKFTL+ +S G+ ++AT KK ++ G+I S K+ N TVDVK ++ SNV T VT+ ++ P K+ LSF +PD +SGK +LQY H +A + +SIGL +P++ LS+ G+K L +G +V DTA+ + KY AG+ + D A+L L +KG +L ASY H V+ Sbjct: 4 PGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASYYHIVN 190
BLAST of FC920909 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.574e-41 Identity = 85/188 (45.21%), Postives = 121/188 (64.36%), Query Frame = 3 Query: 129 PAPFSDVGKRAKDLLNKDYDFGHKFTLSVPSSTGLGLSATGLKKDEIFIGDINSVYKSGNTTVDVKVDTYSNVSTKVTMVDIL-PSTKAALSFRIPDHKSGKLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAGIGLNKPDFSAALLLADKGQALXASYIHAVD 689 P +S +GK+AKDLL +DY HKFTL+ ++ G ++AT KK ++ +G+I S K+ N TVDVK ++ SNV T +T D+ P K LSF +PD KSGK++LQYLH +A I++SIGL P++ LS G+ L +G +V DTA+ +F KY A + D A+L L +KG +L ASY H V+ Sbjct: 4 PGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIVE 191
BLAST of FC920909 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3) HSP 1 Score: 164.081 bits (414), Expect = 6.741e-40 Identity = 78/196 (39.80%), Postives = 121/196 (61.73%), Query Frame = 3 Query: 117 MGSNPAPFSDVGKRAKDLLNKDYDFGHKFTLSVPSSTGLGLSATGLKKDEIFIGDINSVYKSGNTTVDVKVDTYSNVSTKVTMVDILPSTKAALSFRIPDHKSGKLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAGIGLNKPDFSAALLLADKGQALXASYIHAVDPFTSV 704 M P ++++GK+A+DLL +DY KF+++ SSTG+ ++ TG K +F+GD+ + K+ N T DVKV T S++ T +T + P K + ++PDHKSGK ++QY H +A I +S+G TP++ S +G+ L LG +V ++T S +F + AG K D +A+L+L DKG+ L ASY V P T V Sbjct: 1 MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASYYQIVSPSTVV 196
BLAST of FC920909 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3) HSP 1 Score: 157.147 bits (396), Expect = 8.241e-38 Identity = 77/197 (39.09%), Postives = 118/197 (59.90%), Query Frame = 3 Query: 117 MGSNPAPFSDVGKRAKDLLNKDYDFGHKFTLSVPSSTGLGLSATGLKKDEIFIGDINSVYKSGNTTVDVKVDTYSNVSTKVTMVDILPSTKAALSFRIPDHKSGKLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAGIGLNKPDFSAALLLADKGQALXASYIHAVDPFTSVA 707 M P ++++GK+A+DLL KD++ KF+++ S G+ +++TG KK ++ +GD+ + N T D+KV T S T+ + P ++ SF++PD SGK++LQYLH +A I +S+GL P + S IGS L +G +V FDT S +F K AG+ K D A+L + DKG L ASY H V+P + A Sbjct: 1 MVKGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTA 197
BLAST of FC920909 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.076e-37 Identity = 76/191 (39.79%), Postives = 121/191 (63.35%), Query Frame = 3 Query: 138 FSDVGKRAKDLLNKDYDFGHKFTLSVPSSTGLGLSATGLKKDEIFIGDINSVYKSGNTTVDVKVDTYSNVSTKVTMVDI-LPSTKAALSFRIPDHKSGKLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAGIGLNKPDFSAALLLADKGQALXASYIHAVDPFTSVA 707 ++D+GK+ +DLL KDY+ KF L+ S G+ ++A G +K+E G++++ K+ TVDVK ++ S++ T +T+ + P K+ ++ +PD +SGKL+ QYLH +A +++S+GLN P++ LS GSK L +G +V FDTA++ F KY A + L PD A+L L + G L ASY H V + A Sbjct: 8 YTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLVKNHSGTA 198
BLAST of FC920909 vs. ExPASy Swiss-Prot
Match: VDAC_NEUCR (Mitochondrial outer membrane protein porin OS=Neurospora crassa GN=B7H23.070 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 55/193 (28.50%), Postives = 85/193 (44.04%), Query Frame = 3 Query: 138 FSDVGKRAKDLLNKDYDFGHKFTLSVPSST--GLGLSATGLKK-DEIFIGDINSVY--KSGNTTVDVKVDTYSNVSTKVTMVDILPS---TKAALSFRIPDHKSG-KLDLQYLHPHAAIDSSIGLNPTPLLELSATIGSKELVLGGEVGFDTASASFIKYTAGIGLNKPDFSAALLLADKGQALXASYIHAVD 689 FSD+ K A DLLNKD+ T+ V S+T + TG D++ G + + K TV +T + + TKV M D L + SF + G K +L + + + L P + A +G + + G G+D A+ Y+A +G + P +SAA+ D ASY H V+ Sbjct: 6 FSDIAKSANDLLNKDFYHLAAGTIEVKSNTPNNVAFKVTGKSTHDKVTSGALEGKFTDKPNGLTVTQTWNTANALETKVEMADNLAKGLKAEGIFSFLPATNARGAKFNLHFKQSNFHGRAFFDLLKGPTANIDAIVGHEGFLAGASAGYDVQKAAITGYSAAVGYHAPTYSAAITATDNLSVFSASYYHKVN 198 The following BLAST results are available for this feature:
BLAST of FC920909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920909 ID=FC920909; Name=FC920909; organism=Citrus clementina; type=EST; length=708bpback to top |