FC921012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921012 vs. ExPASy Swiss-Prot
Match: NLTP3_PRUDU (Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.350e-36 Identity = 71/125 (56.80%), Postives = 94/125 (75.20%), Query Frame = 1 Query: 16 MTSSVMLMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 390 M SS L+KLV C++ ++C M A V+C VVN+L+PCI+YV+ GGA+ +CC GVR+LY+ A++TADRQ++C CLKQAV+GI YT GLAAGLPGKCG+NIPY+ISPSTDC ++ Sbjct: 1 MASSGQLLKLV--CLVAVMCCMAVGGPKAMAAVSCGQVVNNLTPCINYVANGGALNPSCCTGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDCKSIK 123
BLAST of FC921012 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.814e-26 Identity = 54/93 (58.06%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 112 VTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 390 +TC V + L+PCI+Y+ GG V NCCNGVR+L NAA++TADRQ C CLK A + I L LAAGLPGKCG+++PY+ISPSTDC V+ Sbjct: 1 ITCGQVSSSLAPCINYLRAGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIK--GLNLNLAAGLPGKCGVSVPYKISPSTDCKSVK 91
BLAST of FC921012 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.022e-24 Identity = 52/111 (46.85%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 58 ILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 390 +L+ VCL+ A +A V+C TV+ DL PC+SYV+ GG V T CCNG+ TL + A+++ DRQ VC C+K A+ G++ + + A LP KCG+++PY+ SPSTDC +Q Sbjct: 4 LLLAVCLV-LALHCGEAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ 113
BLAST of FC921012 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.641e-24 Identity = 57/120 (47.50%), Postives = 79/120 (65.83%), Query Frame = 1 Query: 37 MKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYV--SYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 390 M L C++VL ++G+ + VT V N L+PCI+Y+ S GAV CC G+++L +AA++T RQ C C+K A +GI T GLA+GLPGKCG+NIPY+ISPSTDC+ V+ Sbjct: 5 MSLKLACVVVLCMVVGAPLA--QGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGI--TGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 120
BLAST of FC921012 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.641e-24 Identity = 57/120 (47.50%), Postives = 79/120 (65.83%), Query Frame = 1 Query: 37 MKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYV--SYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 390 M L C++VL ++G+ + VT V N L+PCI+Y+ S GAV CC G+++L +AA++T RQ C C+K A +GI T GLA+GLPGKCG+NIPY+ISPSTDC+ V+ Sbjct: 1 MSLKLACVVVLCMVVGAPLA--QGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGI--TGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116
BLAST of FC921012 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.450e-24 Identity = 59/120 (49.17%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 31 MLMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 390 M VT LV+ M VS +TC V + L+PCI YV GGAV CCNG+RT+ AR+TADRQT C CLK IS AAGLPGKCG+N+PY+IS ST+C+ V+ Sbjct: 1 MASSAVTKLALVVALCMA---VSVAHAITCGQVTSSLAPCIGYVRSGGAVPPACCNGIRTINGLARTTADRQTACNCLKNLAGSIS--GVNPNNAAGLPGKCGVNVPYKISTSTNCATVK 115
BLAST of FC921012 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.004e-23 Identity = 55/114 (48.25%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 58 ILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQ---AVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 390 ++V +C++ S V +TC V ++L+PCI+YV GGAV CCNG+R + N A++TADRQT C CLKQ +V G++ AA LPGKCG+N+PY+ISPST+C+ V+ Sbjct: 11 LVVALCMVVS--VPIAQALTCGQVSSNLAPCIAYVRGGGAVPPACCNGIRNINNLAKTTADRQTACNCLKQLSASVPGVNANN-----AAALPGKCGVNVPYKISPSTNCATVK 117
BLAST of FC921012 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.311e-23 Identity = 55/118 (46.61%), Postives = 78/118 (66.10%), Query Frame = 1 Query: 37 MKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 390 M ++ C V ++G+ + ++C V + L+PCISY++ GGAV CC+GV++L +AA++T DRQ C CLK A + IS G AA PGKCG++IPY+ISPSTDCS+VQ Sbjct: 4 MAMMVLCAGVTCMVVGAPYTEA---LSCGQVSSSLAPCISYLTKGGAVPPACCSGVKSLNSAAKTTPDRQAACGCLKSAYNSIS--GVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ 116
BLAST of FC921012 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.236e-23 Identity = 56/114 (49.12%), Postives = 75/114 (65.79%), Query Frame = 1 Query: 58 ILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQ---AVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 390 ++V +C++ S V +TC V ++L+PCI YV GGAV CCNG+R + N AR+T DRQ C CLKQ +V G++ AA LPGKCG+NIPYQISPST+C+ V+ Sbjct: 11 LVVALCMVVS--VPIAQAITCGQVSSNLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNN-----AAALPGKCGVNIPYQISPSTNCANVK 117
BLAST of FC921012 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.814e-23 Identity = 49/112 (43.75%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 58 ILVLVCLMGSAFV-STKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 390 +L L L+ S F ++A ++C V +L PC+ YV GGA+ +CCNG+R L A S +D+Q VC C+K V +SY+ L AA LPGKCG+ +PY+I PST+C+ ++ Sbjct: 5 VLPLCLLLASIFAWGSEAAISCNAVQANLYPCVVYVVQGGAIPYSCCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116 The following BLAST results are available for this feature:
BLAST of FC921012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921012 ID=FC921012; Name=FC921012; organism=Citrus clementina; type=EST; length=657bpback to top |