FC921059

Overview
NameFC921059
Unique NameFC921059
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length518
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921059 vs. ExPASy Swiss-Prot
Match: PCP_MOUSE (Lysosomal Pro-X carboxypeptidase OS=Mus musculus GN=Prcp PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 3.436e-27
Identity = 68/158 (43.04%), Postives = 101/158 (63.92%), Query Frame = 3
Query:   33 INESETT------VGYRWQTCSEMVMPI---GIDNTTMFPPDPFELSNYIDDCKKLYGVSPRPHWVTTYYGGYDIKLILQRFASNIIFSNGLRDPYSSGGVLEDISESVIAIHTVNGSHCLDILRANQDSDPDWLVMQRKAEVEIIEGWISKYYDDLK 479
            +N S+TT      +G+ +Q C+EMVMP    GID+  MF P  ++L  Y +DC   +GV PRPHW+TT YGG +I        SNIIFSNG  DP+S GGV  DI+++++AI+  +G+H LD LRA+   DP  +++ R  EV+ ++ WI  +Y +++
Sbjct:  342 LNISQTTTSSLGSMGWSFQACTEMVMPFCTNGIDD--MFEPFLWDLEKYSNDCFNQWGVKPRPHWMTTMYGGKNISS-----HSNIIFSNGELDPWSGGGVTRDITDTLVAINIHDGAHHLD-LRAHNAFDPSSVLLSRLLEVKHMKKWILDFYSNIQ 491          
BLAST of FC921059 vs. ExPASy Swiss-Prot
Match: PCP_BOVIN (Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=PRCP PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.227e-26
Identity = 68/158 (43.04%), Postives = 97/158 (61.39%), Query Frame = 3
Query:   33 INESETT------VGYRWQTCSEMVMPI---GIDNTTMFPPDPFELSNYIDDCKKLYGVSPRPHWVTTYYGGYDIKLILQRFASNIIFSNGLRDPYSSGGVLEDISESVIAIHTVNGSHCLDILRANQDSDPDWLVMQRKAEVEIIEGWISKYYDDLK 479
            +N SET       +G+ +Q C+EMVMP    G+D+  MF P  + +  Y DDC K +GV PRP W+ T YGG +I        +NIIFSNG  DP+S GGV +DI+++++AI   NG+H LD LRA+   DP  + + R  EV+ ++ WIS +Y  L+
Sbjct:  347 LNVSETATSSLGVLGWSYQACTEMVMPTCSDGVDD--MFEPHSWNMKEYSDDCFKQWGVRPRPSWIPTMYGGKNISS-----HTNIIFSNGELDPWSGGGVTKDITDTLLAIVIPNGAHHLD-LRASNALDPVSVQLTRSLEVKYMKQWISDFYVRLR 496          
BLAST of FC921059 vs. ExPASy Swiss-Prot
Match: PCP_PONAB (Lysosomal Pro-X carboxypeptidase OS=Pongo abelii GN=PRCP PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.216e-25
Identity = 63/155 (40.65%), Postives = 93/155 (60.00%), Query Frame = 3
Query:   33 INESET------TVGYRWQTCSEMVMPI---GIDNTTMFPPDPFELSNYIDDCKKLYGVSPRPHWVTTYYGGYDIKLILQRFASNIIFSNGLRDPYSSGGVLEDISESVIAIHTVNGSHCLDILRANQDSDPDWLVMQRKAEVEIIEGWISKYYD 470
            +N SET      T+G+ +Q C+E+VMP    G+D+  MF P  + L    DDC + +GV PRP W+TT YGG +I        +NI+FSNG  DP+S GGV +DI+++++A+    G+H LD LR     DP  +++ R  EV  ++ WI  +YD
Sbjct:  344 LNISETATSSLGTLGWSYQACTEVVMPFCTNGVDD--MFEPHSWNLKELSDDCFQQWGVRPRPSWITTMYGGKNISS-----HTNIVFSNGELDPWSGGGVTKDITDTLVAVTISEGAHHLD-LRTKNALDPTSVLLARSLEVRHMKNWIRDFYD 490          
BLAST of FC921059 vs. ExPASy Swiss-Prot
Match: PCP_HUMAN (Lysosomal Pro-X carboxypeptidase OS=Homo sapiens GN=PRCP PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.486e-25
Identity = 63/155 (40.65%), Postives = 93/155 (60.00%), Query Frame = 3
Query:   33 INESET------TVGYRWQTCSEMVMPI---GIDNTTMFPPDPFELSNYIDDCKKLYGVSPRPHWVTTYYGGYDIKLILQRFASNIIFSNGLRDPYSSGGVLEDISESVIAIHTVNGSHCLDILRANQDSDPDWLVMQRKAEVEIIEGWISKYYD 470
            +N SET      T+G+ +Q C+E+VMP    G+D+  MF P  + L    DDC + +GV PRP W+TT YGG +I        +NI+FSNG  DP+S GGV +DI+++++A+    G+H LD LR     DP  +++ R  EV  ++ WI  +YD
Sbjct:  344 LNISETATSSLGTLGWSYQACTEVVMPFCTNGVDD--MFEPHSWNLKELSDDCFQQWGVRPRPSWITTMYGGKNISS-----HTNIVFSNGELDPWSGGGVTKDITDTLVAVTISEGAHHLD-LRTKNALDPMSVLLARSLEVRHMKNWIRDFYD 490          
BLAST of FC921059 vs. ExPASy Swiss-Prot
Match: DPP2_RAT (Dipeptidyl-peptidase 2 OS=Rattus norvegicus GN=Dpp7 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.309e-18
Identity = 53/132 (40.15%), Postives = 75/132 (56.82%), Query Frame = 3
Query:   66 WQTCSEMVMPIGIDNTT-MFPPDPFELSNYIDDCKKLYGVSPRPHWVTTYYGGYDIKLILQRFASNIIFSNGLRDPYSSGGVLEDISESVIAIHTVNGSHCLDILRANQDSDPDWLVMQRKAEVEIIEGWIS 458
            +Q C+E+ +    +N T MFP  PF        C   +GV PRP W+ T + G D+K      ASNIIFSNG  DP++ GG+  ++S S+IA+    G+H LD LRA+   DP  +V  RK E  +I  W++
Sbjct:  359 YQACTEINLTFDSNNVTDMFPEIPFSDELRQQYCLDTWGVWPRPDWLQTSFWGGDLKA-----ASNIIFSNGDLDPWAGGGIQRNLSTSIIAVTIQGGAHHLD-LRASNSEDPPSVVEVRKLEATLIREWVA 484          
BLAST of FC921059 vs. ExPASy Swiss-Prot
Match: DPP2_HUMAN (Dipeptidyl-peptidase 2 OS=Homo sapiens GN=DPP7 PE=1 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 3.808e-18
Identity = 55/131 (41.98%), Postives = 74/131 (56.49%), Query Frame = 3
Query:   66 WQTCSEMVMPIGIDNTT-MFPPDPFELSNYIDDCKKLYGVSPRPHWVTTYYGGYDIKLILQRFASNIIFSNGLRDPYSSGGVLEDISESVIAIHTVNGSHCLDILRANQDSDPDWLVMQRKAEVEIIEGWI 455
            +Q C+E+ +    +N T MFP  PF        C   +GV PRP W+ T + G D+     R ASNIIFSNG  DP++ GG+  ++S SVIA+    G+H LD LRA+   DP  +V  RK E  II  W+
Sbjct:  349 YQACTEINLTFASNNVTDMFPDLPFTDELRQRYCLDTWGVWPRPDWLLTSFWGGDL-----RAASNIIFSNGNLDPWAGGGIRRNLSASVIAVTIQGGAHHLD-LRASHPEDPASVVEARKLEATIIGEWV 473          
BLAST of FC921059 vs. ExPASy Swiss-Prot
Match: DPP2_MOUSE (Dipeptidyl-peptidase 2 OS=Mus musculus GN=Dpp7 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.108e-17
Identity = 53/132 (40.15%), Postives = 74/132 (56.06%), Query Frame = 3
Query:   66 WQTCSEMVMPIGIDNTT-MFPPDPFELSNYIDDCKKLYGVSPRPHWVTTYYGGYDIKLILQRFASNIIFSNGLRDPYSSGGVLEDISESVIAIHTVNGSHCLDILRANQDSDPDWLVMQRKAEVEIIEGWIS 458
            +Q C+E+ +    +N T MFP  PF        C   +GV PR  W+ T + G D+K      ASNIIFSNG  DP++ GG+  ++S SVIA+    G+H LD LRA+   DP  +V  RK E  +I  W++
Sbjct:  359 YQACTEINLTFDSNNVTDMFPEIPFSEELRQQYCLDTWGVWPRQDWLQTSFWGGDLKA-----ASNIIFSNGDLDPWAGGGIQSNLSTSVIAVTIQGGAHHLD-LRASNSEDPPSVVEVRKLESTLIREWVA 484          
The following BLAST results are available for this feature:
BLAST of FC921059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PCP_MOUSE3.436e-2743.04Lysosomal Pro-X carboxypeptidase OS=Mus musculus G... [more]
PCP_BOVIN2.227e-2643.04Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=... [more]
PCP_PONAB3.216e-2540.65Lysosomal Pro-X carboxypeptidase OS=Pongo abelii G... [more]
PCP_HUMAN5.486e-2540.65Lysosomal Pro-X carboxypeptidase OS=Homo sapiens G... [more]
DPP2_RAT1.309e-1840.15Dipeptidyl-peptidase 2 OS=Rattus norvegicus GN=Dpp... [more]
DPP2_HUMAN3.808e-1841.98Dipeptidyl-peptidase 2 OS=Homo sapiens GN=DPP7 PE=... [more]
DPP2_MOUSE1.108e-1740.15Dipeptidyl-peptidase 2 OS=Mus musculus GN=Dpp7 PE=... [more]
back to top
Properties
Property NameValue
Genbank descriptionC32202F05EF RVDevelopN Citrus clementina cDNA clone C32202F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921059 ID=FC921059; Name=FC921059; organism=Citrus clementina; type=EST; length=518bp
AAGGAAATAAGACATGCTATGTTAATCCACCAATCAATGAATCTGAAACC
ACTGTGGGATATAGGTGGCAGACATGTAGCGAGATGGTGATGCCCATAGG
CATTGACAATACTACAATGTTCCCACCTGATCCTTTTGAGCTAAGCAACT
ACATCGACGACTGCAAGAAATTGTATGGCGTTTCTCCTCGGCCGCACTGG
GTCACTACTTATTATGGAGGCTATGATATTAAATTGATTCTACAAAGATT
TGCTAGCAACATTATTTTCTCCAATGGGCTTAGAGATCCTTACAGCAGTG
GCGGGGTATTGGAGGACATATCAGAAAGCGTGATTGCCATTCACACGGTC
AATGGTTCTCACTGCCTGGATATTCTTAGAGCAAACCAAGACAGTGATCC
AGATTGGTTGGTCATGCAGCGCAAGGCTGAAGTAGAGATCATTGAAGGAT
GGATATCTAAGTACTATGATGATCTTAAAGCAGTCCAATAAAAGAAATTG
TACTCAAAAGTCAAAACA
back to top