FC921137

Overview
NameFC921137
Unique NameFC921137
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921137 vs. ExPASy Swiss-Prot
Match: CB034_XENLA (Uncharacterized protein C2orf34 homolog OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.866e-18
Identity = 62/197 (31.47%), Postives = 95/197 (48.22%), Query Frame = 3
Query:   39 ASLRWKILRQALLRRSSPQNSDEQSQIGVMNRISRKTTQGFNLIPCQLIEKISNSRDARVCYTLPVAGSPKLFLTQR----VDNHADLGDFEICNRCNIDNTGLVCHWPSEDVLAFFSLSHADMFRSKRVIELGSGYG-LAGLVIAATTEALEVVISDGNPQVV----DYIQRNVDANSGAFGGTTVKSMTLHWNQD 602
            A  RWK+L QAL +    +  D+  Q     ++S +    F L     +++I    D +  +       P+  L  R    + N AD+         + DNTG VC WPSE+V+A++ L H D+FR   V ELG G   LAGL++A + +  EV+++DGN + +    D I+R    N   F    V S  L W+ +
Sbjct:   32 ARARWKLLGQALRK----ERLDDSLQ-----KVSVRRFNSFRLFSVVEMKEIKREADCQTWFQYTCVFCPQYSLCLRHNSGISNVADI-------LTSFDNTGNVCVWPSEEVMAYYCLKHKDIFRGLAVCELGGGMTCLAGLMVAISADVKEVLLTDGNEKAIKNVSDIIRR--PQNEEMFKDRLVSSRVLRWDNE 210          

HSP 2 Score: 25.409 bits (54), Expect = 7.866e-18
Identity = 6/16 (37.50%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  623 HFDVIVASDCTFFKEF 670
            HFD+++ +DC F  ++
Sbjct:  219 HFDIVICADCLFLDQY 234          
BLAST of FC921137 vs. ExPASy Swiss-Prot
Match: CB034_MOUSE (Uncharacterized protein C2orf34 homolog OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.329e-17
Identity = 59/194 (30.41%), Postives = 95/194 (48.97%), Query Frame = 3
Query:   42 SLRWKILRQALLRRSSPQNSDEQSQIGVMNRISRKTTQGFNLIPCQLIEKISNSRDARVCYTLPVAGSPKLFLTQRVDNHADLGDFEICNRCNIDNTGLVCHWPSEDVLAFFSLSHADMFRSKRVIELGSGYG-LAGLVIAATTEALEVVISDGNPQVVDYIQRNVDA------NSGAFGGTTVKSMTLHWNQD 602
            ++RW++LRQ L ++    +         +  +S +  + FNL       K    ++A V         PK  ++ R  N   L   ++    + DNTG VC WPSE+VLA + L H+ +FR   V ELG G   LAGL++A + +  EV+++DGN + +    RNVD+       +G F    + S  L W+ +
Sbjct:   38 AVRWQLLRQVLKQKQLDDH---------LRHVSVRRFESFNLFSVTEATKKGTEKEAGVWVQYTSIFYPKYSISVR-HNSGSLNVEDVLT--SFDNTGNVCIWPSEEVLAHYCLKHSHIFRDLAVCELGGGMTCLAGLMVAISADVKEVLLTDGNEKAI----RNVDSIIACNKKTGVFKTPKISSRVLRWDNE 215          

HSP 2 Score: 24.6386 bits (52), Expect = 1.329e-17
Identity = 6/16 (37.50%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  623 HFDVIVASDCTFFKEF 670
            HFD+++ +DC F  ++
Sbjct:  224 HFDIVMCADCLFLDQY 239          
BLAST of FC921137 vs. ExPASy Swiss-Prot
Match: CB034_HUMAN (Uncharacterized protein C2orf34 OS=Homo sapiens GN=C2orf34 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 3.096e-16
Identity = 54/188 (28.72%), Postives = 91/188 (48.40%), Query Frame = 3
Query:   48 RWKILRQALLRRSSPQNSDEQSQIGVMNRISRKTTQGFNLIPCQLIEKISNSRDARVCYTLPVAGSPKLFLTQRVDNHADLGDFEICNRCNIDNTGLVCHWPSEDVLAFFSLSHADMFRSKRVIELGSGYG-LAGLVIAATTEALEVVISDGNPQVVDYIQRNVDAN--SGAFGGTTVKSMTLHWNQD 602
            RWK+LRQ L ++              +  +S +  + FNL      ++     +            P+  ++ R  N   L   ++    + DNTG VC WPSE+VLA++ L H ++FR+  V ELG G   LAGL++A + +  EV+++DGN + +  +Q  +  N  +G F    + S  L W+ +
Sbjct:   40 RWKLLRQVLKQKHLDD---------CLRHVSVRRFESFNLFSVTEGKERETEEEVGAWVQYTSIFCPEYSISLR-HNSGSLNVEDVLT--SFDNTGNVCIWPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVAISADVKEVLLTDGNEKAIRNVQDIITRNQKAGVFKTQKISSCVLRWDNE 215          

HSP 2 Score: 24.6386 bits (52), Expect = 3.096e-16
Identity = 6/16 (37.50%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  623 HFDVIVASDCTFFKEF 670
            HFD+++ +DC F  ++
Sbjct:  224 HFDIVMCADCLFLDQY 239          
The following BLAST results are available for this feature:
BLAST of FC921137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CB034_XENLA7.866e-1831.47Uncharacterized protein C2orf34 homolog OS=Xenopus... [more]
CB034_MOUSE1.329e-1730.41Uncharacterized protein C2orf34 homolog OS=Mus mus... [more]
CB034_HUMAN3.096e-1628.72Uncharacterized protein C2orf34 OS=Homo sapiens GN... [more]
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Properties
Property NameValue
Genbank descriptionC32101E09EF RVDevelopN Citrus clementina cDNA clone C32101E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921137 ID=FC921137; Name=FC921137; organism=Citrus clementina; type=EST; length=695bp
GAATGGAAACCGATAACACCAACACGACGCTAAGACCAGCGTCTTTGAGG
TGGAAAATCCTTCGTCAAGCTCTTCTACGTCGTTCCTCTCCGCAAAACTC
AGATGAGCAGTCTCAAATTGGCGTTATGAACCGCATATCTCGTAAGACCA
CACAAGGCTTCAACTTGATTCCCTGCCAATTAATCGAGAAAATTTCCAAC
TCTAGAGATGCGCGCGTGTGTTACACGTTACCCGTCGCTGGCTCTCCCAA
ACTTTTTCTCACCCAAAGAGTGGACAACCATGCTGACCTCGGTGACTTTG
AGATTTGCAATAGATGCAATATTGATAACACGGGGCTTGTCTGTCATTGG
CCATCAGAAGATGTCCTTGCTTTTTTCTCCTTGTCACATGCAGACATGTT
TAGGTCTAAAAGAGTTATTGAGCTTGGATCAGGCTATGGCTTAGCTGGAT
TAGTTATTGCAGCAACCACAGAAGCATTAGAAGTTGTAATTTCTGATGGA
AATCCTCAAGTAGTTGATTATATTCAGCGTAATGTGGATGCCAATTCTGG
AGCATTTGGTGGCACAACTGTGAAGTCTATGACACTTCATTGGAACCAGG
ATGATTTTCCGTATATTGTCGACACTTTGACGTGATTGTTGCAAGTGACT
GCACCTTTTTTAAGGAGTTCCACAAGATCTCGNCCGAATATCAAA
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