FC921143

Overview
NameFC921143
Unique NameFC921143
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10327 contig Ccv1_Contig10327:399..1111. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921143 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 5.588e-98
Identity = 173/217 (79.72%), Postives = 192/217 (88.48%), Query Frame = 3
Query:   30 SLSRPLHISNVSCFEPVRVQKSLIKCKAYEAEQSQPIER--EEAKSAAAQKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKK 674
            S  +PLHIS+ S F      K  +K +AYEA++S+P++   E     +AQK+KIGIYFATWWALNVVFNIYNKKVLNA+PYPWLTSTLSLACGSLMML+SWATRIA+ P TDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRF +GETFPLPVY+SL+PIIGGCALAA+TELNFN+ GFMGAMISNLAFVFRNIFSKK
Sbjct:   50 SHQKPLHISSASNF------KREVKVEAYEADRSRPLDINIELPDEQSAQKLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIADAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPIIGGCALAAITELNFNITGFMGAMISNLAFVFRNIFSKK 260          

HSP 2 Score: 33.8834 bits (76), Expect = 5.588e-98
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 2
Query:  668 KEGMKGKSVSGMNYY 712
            K+GMKGKSVSGMNYY
Sbjct:  259 KKGMKGKSVSGMNYY 273          
BLAST of FC921143 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.358e-96
Identity = 169/225 (75.11%), Postives = 193/225 (85.78%), Query Frame = 3
Query:   18 KSEFSLSRPLHISNVSCFEPVRVQKSLIKCKAYEAEQSQP------IEREEAKSAAAQKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKK 674
            ++  ++S+PLH+S+      +R +  +++C+AYEA++S+P          E KS AA+K+KIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLA GSLMMLISWA  I E P TD +FWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRF+LGETFP  VY+SL+PIIGGCAL+A+TELNFNMIGFMGAMISNLAFVFRNIFSKK
Sbjct:   41 RTVLAVSKPLHLSS-----SLRAKSPVVRCEAYEADRSEPHPIGDDAAAAETKSEAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLMMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPTSVYLSLIPIIGGCALSALTELNFNMIGFMGAMISNLAFVFRNIFSKK 260          

HSP 2 Score: 33.8834 bits (76), Expect = 1.358e-96
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 2
Query:  668 KEGMKGKSVSGMNYY 712
            K+GMKGKSVSGMNYY
Sbjct:  259 KKGMKGKSVSGMNYY 273          
BLAST of FC921143 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.537e-42
Identity = 76/163 (46.63%), Postives = 115/163 (70.55%), Query Frame = 3
Query:  186 GIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKK 674
            G +F TW+ LNV+FNI NKK+ N +PYP+  S + LA G +  L+SW   + +    D    K L PVAV H +GHV + VS + VAVSFTH +K+ EP F+   S+F+LG++ P+ +++SL P++ G ++A++TEL+FN +GF+ AMISN++F +R+I+SKK
Sbjct:  101 GFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWTVGLPKRAPIDGNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKK 263          
BLAST of FC921143 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.589e-41
Identity = 78/163 (47.85%), Postives = 113/163 (69.33%), Query Frame = 3
Query:  186 GIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKK 674
            GI    W+ LNV+FNI NKK+ N +PYP+  S + L  G +  L+SW+  + +    + +  K L PVAV H IGHV + VS + VAVSFTH IK+ EP F+   S+FLLG+  P+ +++SL P++ G A+A++TEL+FN +GF+ AMISN++F +R+IFSKK
Sbjct:  106 GILLLMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWSVGLPKRAPVNSDILKVLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNASASQFLLGQPIPITLWLSLAPVVLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKK 268          
BLAST of FC921143 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40
Identity = 79/178 (44.38%), Postives = 121/178 (67.98%), Query Frame = 3
Query:  150 EAKSAAAQK---VKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKK 674
            EAK+   +K   +  G +F  W+ LNV+FNI NKK+ N +PYP+  S + L  G +  L SW+  + +    D +  K L PVAV H IGHV + VS + VAVSFTH IK+ EP F+   S+F+LG++ P+ +++SL P++ G ++A++TEL+FN +GF+ AMISN++F +R+++SKK
Sbjct:   88 EAKTGFLEKYPALVTGSFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLASWSVGLPKRAPMDSKLLKLLIPVAVCHAIGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNVSFTYRSLYSKK 265          
BLAST of FC921143 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40
Identity = 76/163 (46.63%), Postives = 112/163 (68.71%), Query Frame = 3
Query:  186 GIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKK 674
            G +F  W+ LNV+FNI NKK+ N +PYP+  S + LA G +  L  WA  + +    D    K L PVA  H +GHV + VS + VAVSFTH IKS EP F+   S+F+LG++ P+ +++SL P++ G ++A++TEL+FN +GF+ AMISN++F +R+I+SKK
Sbjct:  107 GFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSAIHLAVGVVYCLGGWAVGLPKRAPMDSNLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKSLEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKK 269          
BLAST of FC921143 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.839e-40
Identity = 74/163 (45.40%), Postives = 111/163 (68.10%), Query Frame = 3
Query:  186 GIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKK 674
            G +F  W+ LNV+FNI NKK+ N +PYP+  S + LA G +  L SW   + +    D    K L PV   H +GHV + VS + VAVSFTH IK+ EP F+   S+F+LG++ P+ +++SL P++ G ++A++TEL+FN +GF+ AMISN++F +R+I+SKK
Sbjct:  106 GFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLGSWTVGLPKRAPVDSNILKLLIPVGFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGQSIPISLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKK 268          
BLAST of FC921143 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.969e-39
Identity = 74/163 (45.40%), Postives = 110/163 (67.48%), Query Frame = 3
Query:  186 GIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKK 674
            G +F  W+ LNV+FNI NKK+ N +PYP+  S + LA G +  L+SW   + +    D    K L PVA  H +GHV + VS + V VSFTH +K+ EP F+   S+F+LG+  PL +++SL P++ G ++A++TEL+FN +GF  AMISN++F +R+I+SKK
Sbjct:  113 GFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWGVGLPKRAPIDSTQLKLLTPVAFCHALGHVTSNVSFAAVRVSFTHTVKALEPFFNAAASQFILGQQIPLALWLSLAPVVLGVSMASLTELSFNWLGFTSAMISNISFTYRSIYSKK 275          
BLAST of FC921143 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.387e-39
Identity = 74/163 (45.40%), Postives = 111/163 (68.10%), Query Frame = 3
Query:  186 GIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKK 674
            G +F  W+ LNV+FNI NKK+ N +PYP+  S + L  G +  LISW+  + +    +    K LFPVA+ H IGH+ + VS + VAVSF H IK+ EP FS   ++F+LG+  P  +++SL P++ G ++A++TEL+FN  GF+ AMISN++F +R+I+SKK
Sbjct:  109 GFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSLIHLVVGVVYCLISWSVGLPKRAPINGTLLKLLFPVALCHGIGHITSNVSFAAVAVSFAHTIKALEPFFSAAATQFILGQQVPFSLWLSLAPVVIGVSMASLTELSFNWTGFINAMISNISFTYRSIYSKK 271          
BLAST of FC921143 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.253e-35
Identity = 77/180 (42.78%), Postives = 111/180 (61.67%), Query Frame = 3
Query:  141 EREEAKSAAAQKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLP-VYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKV 677
            E  E      + +++G+ FA W+  N+ FNIYNK+VL A   P   + +  A GS+++   WA  + + P         + P+AV HT+G++   +S+ KV+VSFTH IK+ EP FSV++S   LGE  P P V  S++PI+GG ALA+VTE++FN  GF+ AM SNL    RN+ SKKV
Sbjct:   88 EEGEGSGKMTKVLELGLLFAMWYLFNIYFNIYNKQVLKALHAPMTVTLVQFAVGSVLITFMWALNLYKRPKISAAQLAAILPLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVVLSAMFLGEV-PTPWVIGSIIPIVGGVALASVTEVSFNWAGFLSAMASNLTNQSRNVLSKKV 266          
The following BLAST results are available for this feature:
BLAST of FC921143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
GPT2_ARATH5.588e-9879.72Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH1.358e-9675.11Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
TPT_PEA5.537e-4246.63Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB3.589e-4147.85Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SPIOL1.364e-4044.38Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLAPR1.364e-4046.63Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR8.839e-4045.40Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU1.969e-3945.40Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE4.387e-3945.40Triose phosphate/phosphate translocator, chloropla... [more]
TPT2_BRAOB2.253e-3542.78Triose phosphate/phosphate translocator, non-green... [more]

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Properties
Property NameValue
Genbank descriptionC32101F04EF RVDevelopN Citrus clementina cDNA clone C32101F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921143 ID=FC921143; Name=FC921143; organism=Citrus clementina; type=EST; length=713bp
AAGTGGACAGCAGTTCCAAATCTGAGTTTTCATTGTCTAGGCCTCTGCAT
ATCTCGAACGTTTCATGCTTCGAGCCTGTGAGAGTTCAGAAATCCCTGAT
AAAATGCAAGGCTTATGAGGCGGAACAGTCTCAGCCGATTGAAAGGGAAG
AAGCGAAATCAGCGGCGGCGCAGAAGGTCAAGATCGGTATATATTTTGCG
ACTTGGTGGGCTTTGAATGTTGTGTTTAATATATACAACAAGAAAGTCTT
GAATGCGTATCCCTATCCTTGGCTGACTTCAACTCTGTCCCTGGCTTGCG
GGTCGTTGATGATGCTGATTTCATGGGCTACCAGAATTGCTGAGCCCCCA
AATACTGATCTTGAGTTCTGGAAGACTTTGTTTCCTGTTGCTGTGGCACA
TACAATTGGGCATGTGGCTGCTACAGTGAGTATGTCCAAGGTTGCAGTTT
CATTCACTCACATCATTAAGAGTGGAGAGCCTGCTTTCAGTGTTTTGGTT
TCAAGGTTTCTTCTGGGGGAGACCTTCCCTTTGCCGGTTTATATGTCCCT
TGTTCCAATCATTGGTGGTTGTGCTCTTGCTGCTGTGACTGAGCTAAACT
TCAACATGATTGGTTTTATGGGGGCCATGATATCAAACTTGGCATTTGTG
TTCCGGAACATATTTTCAAAGAAGGTATGAAGGGAAAGTCTGTCAGCGGG
ATGAACTACTATG
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