FC921167

Overview
NameFC921167
Unique NameFC921167
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length428
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC921167 vs. ExPASy Swiss-Prot
Match: WIP2_ARATH (WPP domain-interacting protein 2 OS=Arabidopsis thaliana GN=WIP2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.367e-13
Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = 3 
Query:  111 DPLVESLLTLQSVQDALEKEVEKLGEIGKDAIL--LHDNSFEGSSIPADSIFTDPQIHGLSSSNKFRSEKNGEGASGSLEMLVXSLKQNVQHLEAKLEEMRTLLEVKE 428
            DPL+ ++ + Q++Q+AL+KE++K  E+GK+  +  LHD     S I A            SSS +F SEK GE    SL+  + +L  NV+HLE KLEE + +LEVKE
Sbjct:  272 DPLIVAVNSFQTLQEALQKELQKFQELGKEEPITSLHDGGESSSCIHAGHEGASEA----SSSYRFGSEKMGEMELTSLDSEILNLVNNVEHLEIKLEEAKRILEVKE 375
The following BLAST results are available for this feature:
BLAST of FC921167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WIP2_ARATH8.367e-1341.67WPP domain-interacting protein 2 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionC32101H09EF RVDevelopN Citrus clementina cDNA clone C32101H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921167 ID=FC921167; Name=FC921167; organism=Citrus clementina; type=EST; length=428bp
AAGAGAATGTGGGAGTAGTTGAGGATCTTTCACAAGATGATTTAGCAGCG
GACTTATCTTGGGATGCTAAGGATGAGAAGAATGAAAACCACCAGCCGTC
AACAGTACGGGATCCTTTGGTGGAGTCTCTCCTCACCCTCCAGTCTGTGC
AAGATGCGCTGGAAAAAGAAGTTGAGAAATTAGGGGAGATTGGGAAGGAT
GCCATATTGCTACATGATAACTCATTTGAGGGTAGCAGTATACCTGCTGA
TTCCATTTTTACTGATCCACAAATCCATGGACTAAGTTCTTCTAACAAAT
TTAGATCTGAAAAGAATGGAGAAGGTGCTTCAGGTTCCTTGGAAATGCTG
GTGCNTAGCTTGAAACAGAATGTGCAACATTTGGAAGCCAAACTGGAGGA
GATGAGAACTCTGCTAGAGGTGAAGGAA
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